Sciurus carolinensis (gray squirrel): 124964360
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Entry
124964360 CDS
T08117
Name
(RefSeq) zinc finger and SCAN domain-containing protein 20-like isoform X1
KO
K09230
SCAN domain-containing zinc finger protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124964360
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124964360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
SCAN
Myb_DNA-bind_4
zf-C2H2_4
zf-C2H2_15
zf-C2H2_jaz
zf-C2H2_16
zf-C2H2_6
zf-POGZ
zf-C2H2_11
C2CH-4th_BIRD-IDD
Myb_DNA-binding
Zn_ribbon_8
zf_UBZ
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
124964360
NCBI-ProteinID:
XP_047380471
LinkDB
All DBs
Position
1:complement(185104436..185123981)
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AA seq
1042 aa
AA seq
DB search
MAVALESEAQACPTPEPEDLLIVKLEEDTWGSESKSREKDHDLGPEASRQRFRQFQYRDA
AGPHEAFSQLWALCCRWLRPEIRLKEQILELLVLEQFLTILPREAQTWVQARHPQSGEEA
VALVEDWHREARATGQQELEFCAEETRSLKAEQESQSFKLQPADHWPGGQTQKQCVKNTC
PDLPKYLNAKMAPRPLKENAVLTPRVPTVPKMGSVGDWEVTAESQEALGPGKHAEKFCKD
PPGGDCGNSVCLGVPISKPSITSQREQGPEFWGLSPINSGKRNTANYNLDNEQAKPAQAS
AWRDSGAWEEQCQWDVEDTKVSGVHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAI
AERLRARGFLRTLEQCRYRVKNLLRNYRKAKSSHPPGTCPFYEELEALVRARTAIRARNG
PGEVVALPRLGDSDAEMDEPEEGGWEPEETAEDCNGAGLATDGSVQGPRIPGGRALLQSR
IAGVHWGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRF
KNLLRSYRKAKSSHPPGKCPFYEELDSLMRARTTVRAMETVGEATGLPRSGKRSTKADDQ
EDWDETADETAIKPPTPCPKTPDTGFELRHEDEDQTSEQDIFEHLPGALSKCSSAAVCPP
HGWEEDSENENEGEGSGGGPPQEQWEGCSSEEDLEKLIDHQGLYLVEKPHRCDTCVKSFS
RSSRFITHQRTHTGEKPYTCPECGKSFSDRSNLSTHQRIHTGEKPYKCLECGKSFSDHSN
LVTHQRIHTGEKPYKCGECWKSFNQSSNLLKHQRIHLGGSPNQCGEPGESLGQCPSLGAA
WRDSTEETSEQPHGVGTNLSSPGPHGTNSGEKLYQCSECGRRFSKSSALISHQRIHTGEK
PYECADCGKSFSKSSTLANHQRTHTGEKPYRCVDCGKCFSERSKLITHQRVHTGEKPYKC
LECGKFFRDRSNLITHQRIHTGEKPYKCRECGKCFNQSSSLIIHQRIHTGEKPYKCTECG
KDFNNSSHFSAHRRTHAGGKAS
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggccctggaatctgaggcccaggcctgtcctactccagagcctgaagatctc
cttattgtgaaactggaggaggacacatgggggtcagaatccaaatctcgggagaaggac
catgaccttggccctgaggcctcccgccagcgcttcaggcagttccaatatagggatgca
gctggaccccacgaggctttcagccagctgtgggctctctgctgtcgttggctgaggcca
gagatccgcctcaaagagcagatcctggagctgctggtgctggagcagttcctgactatc
ttacccagggaggcacagacctgggtgcaggcacgccatcctcagagtggggaggaggca
gtggccctggtggaggattggcaccgagaggcccgggctaccggacaacaggaactggag
ttttgtgcagaagagaccaggtccttgaaggcagagcaagaatctcagagcttcaagcta
cagccagcagatcactggcctgggggacagacccagaaacagtgtgtgaagaacacttgc
ccagaccttcccaagtatctcaatgccaagatggcaccacggcccttgaaagagaatgct
gtccttacccctcgagtccctactgtcccaaagatggggagtgttggagattgggaagtg
accgctgagtcccaggaagccctgggccctggcaaacatgctgagaagttctgcaaggac
cccccgggaggcgactgtggaaacagtgtatgcctgggagttcccatttcaaaaccaagt
atcacttcccagcgagagcaaggaccagaattttggggtctaagccctataaattctggg
aaaaggaacactgctaattataacctggacaacgaacaggcaaaaccagctcaggcatcg
gcctggagggactcaggggcctgggaagaacaatgccaatgggatgtggaggacacgaag
gtgtcaggtgtccactggggctatgaggagaccaagaccttcctggcaattttgagtgag
tctcctttctctgaaaagctccggacttgtcaccagaaccgccaggtgtaccgggctatt
gcagagcggctaagggcacggggcttcctgcggacactggaacagtgtcgctacagggtc
aaaaacctcctccggaattatcggaaagccaagagcagccaccctccagggacctgcccc
ttctatgaggagctggaggccctggtgagggctcggacagccatcagagccagaaatggc
ccaggagaggtagtggcactccccaggctgggggatagtgacgcagaaatggatgagccg
gaggaagggggctgggagcctgaggaaacagcagaagattgtaacggtgctggcctagcc
actgatgggtctgtccaggggcccaggattccagggggccgagctctgctccagagtcgt
attgcaggtgtgcactggggctatgaggagaccaaggccttcctggcaattctcagtgag
tccccattctctgaaaaacttcgcacctgtcaccagaatagccaggtgtaccgagccatt
gcagagcggctgtgtgcactgggcttcctgcggacactggaacagtgtcgctatagattc
aaaaacctccttcgaagctaccggaaagccaagagcagccacccaccagggaagtgtccc
ttctatgaggagctggactcactgatgagggctcggactacagtcagggccatggagact
gtcggggaggccacaggtctgcccaggtctgggaagagaagtactaaggctgacgaccag
gaggactgggatgagactgcagatgaaactgccatcaaaccaccaaccccatgtcctaaa
actccagacacaggttttgagttgaggcatgaggacgaagaccaaacttcagagcaggac
atttttgagcatttgcctggagccttatcaaagtgcagctctgcagctgtatgcccccct
catggctgggaagaagacagtgagaatgaaaacgaaggtgaagggtcagggggaggtcct
ccccaggagcagtgggaagggtgctcttctgaggaggacttggaaaaactcatcgaccac
cagggcttgtacctcgtggagaaaccccacaggtgtgacacctgtgtgaaaagctttagt
cggagctcccgcttcatcacccaccagcgaacccacacaggtgagaagccctacacatgc
ccggaatgtggaaaaagctttagtgaccgctctaacctcagtacgcatcagagaatccac
actggagagaagccctacaaatgccttgaatgtgggaaaagctttagtgaccactccaat
ctcgtcactcaccagagaatccacactggggaaaagccctataagtgtggggagtgttgg
aaaagcttcaaccagagctcaaaccttttgaaacatcagagaatccacttgggaggaagt
cctaaccagtgtggtgagcctggggagagcctcggccagtgcccgtctcttggtgctgcc
tggagggattccacagaggagacctctgaacagcctcacggggtcggtacaaacttgagc
tcacctgggccgcacggcaccaactcaggggagaaactgtatcagtgctctgaatgtggg
aggcgcttctcaaagagctctgccctcattagtcaccaaagaatccacacgggagagaaa
ccttacgagtgtgccgactgtgggaaaagcttcagtaagagctccaccctggccaaccac
cagcgaacccacacgggtgagaagccgtatcggtgtgtggactgtggcaagtgcttcagc
gagcgctccaagctcatcacacaccagcgggtgcacactggggagaagccctacaaatgc
ctggagtgtgggaagttcttccgggaccgctccaacctcatcactcaccagaggatccac
acaggagagaagccgtacaagtgcagagagtgtgggaaatgcttcaaccagagctccagc
cttatcatccaccagagaatccacacgggggagaaaccctacaagtgcactgagtgcggc
aaagacttcaacaacagctcccacttcagcgcccaccggagaacgcacgccggcgggaaa
gcatcgtag
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