Sciurus carolinensis (gray squirrel): 124964419
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Entry
124964419 CDS
T08117
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124964419
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124964419
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
LRR_9
C2-set_2
Ig_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
124964419
NCBI-ProteinID:
XP_047380658
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Position
14:43187149..43679521
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AA seq
606 aa
AA seq
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MLHTAVSCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLE
QLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDM
MPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLVRLQ
ELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACD
CRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL
LVDEGQTVQLECSADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGL
YVCIASNAAGNDTFTASLTVKGFASDRFLYANRTPMYMTDSNDTVSNGTNANTFSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacggccgtatcatgctggcagccattcctgggtctggctgtggtgttaatc
ttcatgggatccaccattggctgtcctgctcgctgtgagtgctctgcccagaacaaatct
gttagctgccatagaaggcggttgattgccatcccagagggtattcccattgagaccaaa
atcttggacctgagcaaaaacaggttgaaaagcatcaaccctgaagaattcatatcatac
cctcttttggaggagatagacttgagtgacaacatcatcgccaatgtggaaccaggagca
tttaacaatctctttaacctgcgttccctccgcctgaaaggcaatcgtctcaagttggtc
cctttaggagtattcacaggactctccaacctcactaagcttgacattagtgagaataag
atcgtcattttactggactacatgttccaggatctgcataacctaaagtctctagaagta
ggggacaatgatttggtttatatatcacacagggccttcagtgggcttcttagcttggag
cagctcaccctggagaaatgcaacctaacagcagtaccaacagaagccctttcccacctc
cgcagcctcatcagcctgcatctgaagcatcttaatatcaacaatatgcctgtgtatgcc
tttaaaagattgttccacctgaaacacctagagattgactattggcctttactggatatg
atgcctgccaatagcctctatggcctcaacctcacatccctttccatcactaataccaat
ctgtccactgtacccttccttgcctttaaacacctggtatacctgacacacctaaacctc
tcctacaatcccatcagcactattgaagcaggcatgttctctgacctggtccgccttcaa
gagcttcatatcgtgggggcccagctccgcaccattgagccccactccttccaagggctc
cgctttcttcgcgtgctcaatgtatctcagaacctactggaaactttagaagagaatgtc
ttctcctcccctagggctttggaggtcttgagcattaataacaacccactggcctgtgac
tgccgtctcctctggatcctacagcgacagcccaccctacagtttggtggccagcagccc
atgtgtgctggcccagacaccatccgagagagatcattcaaggatttccacagcactgcc
ctttctttttactttacctgcaaaaaacccaaaatccgtgaaaagaagttgcagcatcta
ctagtggatgaagggcagacagtccagttagaatgcagtgccgatggagacccacagcct
gtgatttcctgggtgacaccccgaaggcgttttatcaccaccaagtccaatggaagagcc
actgtgttgggcgatggcaccctagaaattcgctttgcccaggatcaggacagtgggctg
tatgtttgcatcgctagcaatgctgctgggaatgataccttcacagcctccttaactgtg
aaagggtttgcctcagaccgctttctttacgcaaacaggacccctatgtacatgactgac
tccaatgacaccgtttccaatggcaccaatgccaatactttttccctggaccttaaaaca
atactggtatccacagccatgggctgtttcacattcctgggagtggttttattttgtttt
cttctcctctttgtgtggagccgagggaaaggcaagcacaaaaacagcattgaccttgag
tatgtgccccgaaaaaacaatggtgctgttgtggaaggggaagtggctggacccaggagg
ttcaacatgaaaatgatttga
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