Sciurus carolinensis (gray squirrel): 124964461
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Entry
124964461 CDS
T08117
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2-like
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124964461
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
124964461
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
T2SSM_b
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
124964461
NCBI-ProteinID:
XP_047380761
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Position
14:7138222..7149059
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AA seq
330 aa
AA seq
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MGSVGVPRLSGLFATYKPPGLKWLHLRDTIELQLLKGLNAGKPSVPEHRVRFLLGPIEGN
EEELALTATSVPTLTNHRLVCGPAFTSLKIGVGHRLDAQASGVLVLGVGHGRRLLTDMYN
AHLTKDYTVRGLLGKATDDFCEDGRLVEKTTYDHVTREKLDQILAVIQGSHQKALVMYSN
LDLQSQEAYEMATRGAIRPMHKSPMLITGIRCLHFAPPEFLLEVQCMHETQQQLRKLVHE
IGLELKTTAVCSQVRRTRDGFFTLDDALLRTHWDLHSILDAIQATAPRVAAELDKNLRPG
LSTPKLPSPDRSWDSEALSSSLGLGSCAGH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagttggtgtgccgcggttgagtgggctcttcgccacctataagcccccgggg
ctaaagtggctgcatctacgggatactatagagctgcagcttctgaagggtctcaatgct
gggaagccttctgtccctgagcaccgtgttcgcttcttgttgggccccattgaaggcaat
gaagaggagctggccctcacagccaccagtgtgcccaccctcaccaaccacagacttgtg
tgtggaccagcattcaccagcctgaagattggtgtgggacatcggctggatgcccaggct
tctggggtacttgtgcttggcgtgggacatggacgaagactcctcacggacatgtacaat
gctcacctcaccaaggattacacggtgcgtggccttctaggcaaagccacagacgacttc
tgtgaggatggacggctggtggagaagacaacatatgatcatgtgaccagagagaagctg
gaccagatcctggctgttatccaaggctcccatcagaaggctctggtgatgtactctaac
ctggacctgcagtcacaggaggcctacgagatggccacaagaggtgcgatccggcccatg
cacaagtccccaatgttgatcaccggcattcggtgcctccactttgcacctccagaattc
ctcttagaggtgcagtgtatgcacgagacacagcagcagctgcgaaagctggtgcacgag
atcggcctggagctgaagaccacggctgtctgctcacaagtgcggcgcacacgtgatggc
ttcttcacactggacgatgccctcttgaggactcactgggacctacacagcatcctggac
gccatccaggctacagccccccgggtggcagcggagctggacaagaaccttaggccaggg
ttgagcaccccgaagctccccagtcctgaccggtcctgggactctgaggctctgagttcc
tccttggggctggggagctgtgcaggtcattga
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