Sciurus carolinensis (gray squirrel): 124964474
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Entry
124964474 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: AP-2 complex subunit beta-like
KO
K11825
AP-2 complex subunit beta-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04142
Lysosome biogenesis
ncar04144
Endocytosis
ncar04721
Synaptic vesicle cycle
ncar04961
Endocrine and other factor-regulated calcium reabsorption
ncar05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124964474
04142 Lysosome biogenesis
124964474
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
124964474
09156 Nervous system
04721 Synaptic vesicle cycle
124964474
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
124964474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124964474
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Clathrin-mediated endocytosis
AP-2 complex
124964474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
Cnd3
PDS5
HEAT_EZ
HEAT_GCN1
HEAT_MROH2B_C
RTP1_C1
NELF-A_N
Arm_2
HEAT_spiro
PIK3R4-like_middle
API5
TOR1L1_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
124964474
NCBI-ProteinID:
XP_047380792
LinkDB
All DBs
Position
14:51478546..51481461
Genome browser
AA seq
937 aa
AA seq
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MTDSKYFTTNKKGENFELKAELNNEKKEKRKEAVKKVIAALTVGKDVSSLFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQRFLDSLRDLIADSNPMVVANA
VAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI
CDRVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQY
VALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANITQVLAELKE
YATEVDVDFVRKAVRAIGQCAIKVEQSAERCVSTLLDLIQTKVNYXVQEAIVVIRDIFRK
YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQV
QLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWCLLSTDPVTAKEV
VLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGST
DAGDSPVGTTTAPNLEQPQVIPSQGDLLGDLLNIDLGPPVNVPQVSSMQMGAVDLLGGGL
DSLVGQSFIPSSVPATFAPSPTPAVVSSGLNDLFELSTGIGMAPGGYVAPKAVWLPAVKA
KGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQ
SIDVSLPLNTLGLVTKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLAM
WKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWIL
AELCIQPGNPNYTLSLKCRVPEVSQYIYQVYDSILKN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccaagtactttacaactaataaaaagggagaaaactttgaattaaaagct
gaactcaacaatgaaaagaaagaaaagaggaaggaggctgtgaagaaagtgattgctgct
ttgactgtggggaaggatgttagctctctctttccagatgtagtgaactgtatgcagacc
gacaacctggaactgaagaaactcgtatatctctacttgatgaactatgccaagagtcag
ccagatatggccatcatggctgtcaacagctttgtgaaggactgtgaagatcccaatcct
ttgattcgggccttggcagttaggaccatggggtgcatccgggtggacaaaattacagaa
tatctctgtgagcccctgcgcaagtgcttgaaggacgaagacccctatgttcggaaaaca
gcagcagtctgtgtggcaaaactccatgatatcaatgcccaaatggtggaagatcagaga
tttctggattctctacgggatctcatagcagattcaaatcctatggtggtggctaatgct
gtggcagcattatctgaaatcagtgagtctcacccaaacagcaacttacttgatctgaac
ccacagaacattaataagctgctgacagctctgaatgagtgcacagaatggggccagatt
ttcatcctggactgcctgtctaattacaaccccaaagatgaccgggaagctcagagcatc
tgtgaccgggtaaccccccggctgtcccatgccaactcagcagtggtgctttcagcggtg
aaagtcctaatgaagtttctagagttgttacccaaggactctgactactataatatgcta
ctgaagaagttagctcctccacttgtcactttgctgtctggggagccagaagtgcagtat
gtcgccctgaggaacatcaacctaattgtccagaaaaggcctgaaatcttgaagcaggaa
ataaaagtcttctttgtgaagtataatgatcccatctatgttaaactagagaaattggac
atcatgattcgtctggcatcccaagccaacattactcaggttctggcagaactgaaagaa
tatgccactgaggtggatgtggactttgttcgcaaagctgtccgggccattggacaatgt
gccatcaaggtagagcaatctgccgagcgctgcgtaagcacattgcttgatctaatccag
accaaagtaaattatnnggtccaagaggcgattgttgtcataagggacatcttccgcaaa
taccccaacaagtatgaaagtatcattgccactctctgtgaaaacttagactcactggat
gagccagatgctcgagcagctatgatatggattgtgggagaatatgctgaaagaattgac
aatgcagatgagttactagagagctttctggagggttttcatgatgaaagtacccaagtg
caactcactctgcttactgccatagtgaagctgtttctcaagaagccatcagaaacacag
gagttagtccaacaggtcttgagtttggcaacacaggattctgataatcctgaccttcga
gatcggggctatatttattggtgccttctctcaactgatcctgtgacagccaaagaagta
gtcttatctgagaagccactaatctctgaggaaacagaccttattgagccaactctgctg
gatgaactaatctgccacattggttctttggcctctgtgtaccataaacctcccaatgct
tttgtggaggggagtcatgggatccatcgcaagcatttgccaattcatcatggcagcact
gatgcaggtgacagccctgttggcaccaccactgcacccaacctggaacagcctcaggtt
atcccttctcaaggagaccttctaggggatcttttaaatattgaccttggtcccccagtc
aatgtgccacaggtgtcctccatgcagatgggagcagtggatctcctgggaggaggactt
gatagtctggtaggacagtccttcatcccatcatcagtgcctgccacctttgctccttca
cctactcctgcagtggtcagcagtggactaaatgacctgtttgaactctccacaggaata
ggcatggcacctggtggatatgtggctcctaaggctgtctggctacctgcggtaaaggct
aaaggtttggagatttcgggaacatttactcaccgccaagggcacatctatatggaaatg
aactttaccaacaaagctctgcaacacatgacagactttgcaatccagtttaacaagaat
agctttggtgtcatcccaagcactcctctggccatccatacaccactgatgccaaaccag
agcattgatgtctccttgcctctcaacaccttgggcctagtcacgaagatggaacctctg
aataacctgcaggtggctgttaaaaacaatattgatgtcttctacttcagctgcctcatc
ccactcaatgtgctttttgtagaagatggcaaaatggaacgccaggtcttccttgctatg
tggaaggatattcccaatgaaaatgaactccagtttcagataaaggaatgccatttaaat
gctgacactgtttccagcaagttgcaaaacaacaatgtttatactattgccaagaggaat
gtggaagggcaggacatgctataccaatccctgaaactcactaatggcatttggattttg
gctgagctatgcatccagccaggaaaccccaattatacgctgtcactgaagtgtagagtt
cctgaagtctctcaatacatctatcaggtctacgacagcattttgaaaaactaa
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