Sciurus carolinensis (gray squirrel): 124964480
Help
Entry
124964480 CDS
T08117
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124964480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124964480
04121 Ubiquitin system [BR:
ncar04121
]
124964480
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124964480
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
124964480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
124964480
NCBI-ProteinID:
XP_047380798
LinkDB
All DBs
Position
14:complement(38804112..38874180)
Genome browser
AA seq
1119 aa
AA seq
DB search
MAEAPPVSGTFKFNTEAAEFIPQERKNSVLNCGTQRRSDSNKIGRRNYSSSPPCHISRQI
PYDDISVVHQHSYPSGSKPKSQQTFFQSSASNKSLKNHSLQNQPWQKLRHEKHHIRVKKV
QGLTDQSSDTTSLESVSKLESGTNPSEHSPSESEKEVVGADPRGAKPKKSAQFVYSYGRG
SKVKGKLKCEWGNKMTPKPEDAGPENNKSVGVFHPDSSDASCRKGVLDGYGARRNEQRRY
PQKRPPWEVEGARPRPGRNPPKQEGQRHTNSGPRNNMAPIPKDNLNERPTKSACDSGNLA
VVNKSSRRVDQEKSAIRRQDLQVISSFPRGKQSHVLKNVETHTGSLIEQLTTEKYECMVC
CELVRVTAPVWSCQSCYHVFHLNCIKKWARSPASQADGQSGWRCPACQNVSAHVPNTYTC
FCGKVKNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFMTKTCECGR
TRHTVRCGQAVSVHCSNPCENILNCGQHHCAELCHGGQCQPCRIILNQVCYCGNTSRDVL
CGTDIGKSDGFGDFACLKICGKDLKCGSHTCSQVCHPQPCQPCPRLPHLVRCCPCGQTPL
SQLLELGSSSRKTCMDPVPSCGKVCGKPLPCGSSDFIHTCEKLCHEGDCGPCSRTSVISC
RCSFRTKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRC
GLHRCEEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARVHECDHP
VYHSCHSEEKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCSATLPCGMHKCQRLC
HKGECLVEEACKQPCTIPRADCGHPCMASCHPSSPCPVTACKAKVELQCECGRRKEMVIC
SEASSTYQRIAAISMASKITDMQLGDSVEISKLITKKEIQQARLECDEECSALERKKRLA
EAFDISDDSDPFNIRSSGSKFSDSLKDDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSH
SFPPMNRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSICPPTTLTGVLEREMQ
TRPPPPIPHHRQQTDKNSGSSNLQKIAKEPVIDYFDVQD
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcctcctgtctcaggtacttttaaatttaatacagaagctgctgaattc
attcctcaggaaagaaaaaattctgttctaaattgcggcactcagagaagatcagactct
aataagattggcagaagaaattacagttcatcacctccctgtcacatttccaggcagatt
ccttatgatgacatctctgttgttcatcagcacagttatccttcaggaagtaaacctaag
agtcaacagacttttttccagtcttctgcttctaataaatcactcaagaaccatagtctt
cagaatcagccttggcaaaaattaaggcatgaaaagcatcatatcagagtcaagaaagta
caagggctcactgatcagagctcagatacaactagcttagaaagtgtgtccaagttagag
agtgggacaaaccccagtgagcatagcccttctgagagtgagaaggaagttgttggtgca
gatcccaggggagcaaaacccaaaaaatcagcacagtttgtatacagttatggtagagga
tcaaaagtcaaggggaaactaaagtgtgaatggggtaacaaaatgactccaaaacctgag
gatgccggacctgaaaataacaaatctgtgggggttttccaccctgactcttcggatgca
tcctgtagaaaaggagtactggatggatatggagccagacgaaatgagcaaagaagatac
ccacagaaaaggcctccctgggaagtggaaggagccaggccccgaccaggccggaatcca
ccaaaacaggagggccaacgacatacaaattcaggacccagaaacaacatggcccccatt
ccaaaggataatctcaatgaaagaccaacaaaatcagcctgtgacagtgggaatttggca
gttgtcaacaagtcttccagaagggttgaccaagagaaaagtgctataaggagacaagat
cttcaagtgatatcttctttcccccgaggaaaacagagccatgtgctaaaaaatgtggaa
acacatacaggttctctaattgaacagctgactacagaaaaatatgagtgcatggtatgc
tgtgaattggttcgtgtcacagccccagtgtggagttgtcagagctgttaccacgtgttt
catctgaactgcataaagaaatgggcaaggtctccagcatcgcaagcggatggccagagt
ggttggaggtgccctgcctgtcagaatgtgtctgcacatgttcctaatacctatacttgc
ttctgtggcaaagtaaagaatcctgaatggagcagaaatgaaattccacatagttgtggt
gaggtttgtaggaagaaacagcctggccaggactgcccacattcctgtaaccttctctgt
catcctggtccctgcccaccctgtcctgcttttatgactaaaacatgtgaatgtggacgc
accaggcacacagttcgctgtggtcaggctgtctcagtccactgttctaacccatgtgag
aatattttgaactgtggtcagcaccactgtgctgagttgtgccatggaggtcaatgccag
ccttgccggatcatactgaaccaggtatgctactgtggcaacacctcccgagacgtgtta
tgtggaacagacataggaaaatctgatggatttggggactttgcctgtttaaagatatgt
ggcaaggacttgaaatgtgggagtcatacgtgttctcaagtgtgccatcctcaaccttgc
cagccttgcccacggctcccccatctggtgcgctgttgcccttgtggccaaactcctctc
agccaattactagaactcggaagtagcagccgaaaaacatgcatggatcctgtcccttca
tgtggaaaagtgtgtggcaaacctctcccttgtggttcctcagatttcattcatacctgt
gaaaagctctgccatgaaggagactgtggaccatgctctcgcacatctgttatttcctgc
cgatgctctttcagaacaaaggagcttccatgtaccagtctcaaaagtgaagatgctaca
tttatgtgtgacaagcggtgtaacaagaaacgattgtgtggacggcataaatgtaacgag
atatgctgtgtggataaggagcacaagtgtcctttgatttgtgggaggaaacttcgttgt
ggccttcataggtgcgaagaaccttgtcatcgagggaactgtcagacatgctggcaagcc
agttttgatgaattaacctgccactgtggtgcatcagtgatctatcctccagttccttgt
ggtactaggcctcctgagtgtacccagacctgtgccagagtccacgaatgtgaccatcca
gtataccattcttgtcatagtgaggagaaatgtcccccttgtactttcctaactcagaag
tggtgcatgggcaaacatgagttacgaagcaacatcccctgtcatctggttgatatctct
tgcggattaccctgcagtgctacgctaccatgtgggatgcacaagtgtcagagactctgt
cacaaaggagaatgtcttgtggaggaggcctgcaaacagccctgcaccatccccagagct
gactgtggccacccatgtatggcatcatgccaccctagctcaccctgcccagtgactgct
tgcaaagccaaggtagagctacagtgtgaatgtggacgaagaaaagagatggtgatttgc
tctgaagcatccagtacctatcaaagaatagctgctatttctatggcctctaaaataaca
gacatgcagcttggagattcagtggagatcagcaagttaattaccaagaaggaaattcaa
caagccaggctggagtgtgatgaggagtgttcagccttggaaaggaaaaagaggttagca
gaggcatttgatatcagtgatgattctgatcctttcaatatacgttcttcaggatcaaaa
ttcagtgatagtttgaaagatgatgccaggaaggacttaaagtttgtcagtgatgttgag
aaggaaatggaaacccttgtggaggccgtgaataagggaaagaatagtaagaaaagccac
agcttccctcccatgaacagagaccaccgccgaatcatccatgacttggcccaagtgtat
ggtctggagagtgtgagctatgacagtgaaccaaagcgcaacgttgtagtcactgccatc
agagggaagtccatttgtccacctaccacgctgacaggtgtgcttgaaagggaaatgcag
acccgacctccaccaccaattcctcatcacagacagcagacagacaagaattctgggagc
agtaatttacagaagatagccaaggagccagtaattgactactttgatgtccaggactga
DBGET
integrated database retrieval system
