Sciurus carolinensis (gray squirrel): 124964526
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Entry
124964526 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124964526
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124964526
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124964526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
124964526
NCBI-ProteinID:
XP_047380894
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All DBs
Position
14:36260377..36379986
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AA seq
620 aa
AA seq
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MSGSAAAAVAAAAASAAAAAAHFQPQSSSPRPGPAELGPPRRPRPQPPPPPRPEPAAADR
LSPPGHGPLRAGAQGGGACGRAPGAGSVGASFQCQSIHHDHICHDDSDKISPGANSAPLP
GHPNKVICERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTS
ASPAPSPPMRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRH
NSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGT
VPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQH
LPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELL
GEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRS
QQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKP
RGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK
ANRTCPICRADASEVHRDSE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagcgccgccgccgcggtcgccgccgccgccgcctcagcagccgcggccgcc
gcgcacttccagcctcagtcgtcgtctcccaggccgggccccgccgagctcgggcccccg
cgccgcccgcgcccccagccgccgccgccgccccggcccgagcccgccgccgccgaccgc
ctcagtcctccgggccacgggcctctccgggcgggcgcgcagggtggcggcgcctgcggc
cgagcgccgggagcaggtagtgttggtgcttcttttcagtgccagtccatccaccacgac
cacatttgtcatgatgacagtgacaagatatctcccggggccaattcagcacctctacct
ggccatcctaacaaggtgatttgtgaaagggtgagacttcagagcctgttccctctcctc
ccaagtgatcagaacactaccgttcaagaggatgctcacttcaaagctttcttccagagt
gaagatagtccaagtcctaagagacagcgcctctctcattcagtctttgattatacatca
gcatcaccagctccctcaccaccaatgcgaccatgggagatgacatcaaataggcagccc
ccttcagttcgaccaagccaacatcacttctcaggggaacgatgcaacacacctgcacgc
aacagaaggagtcctcctgtcaggcgccagagaggaagaagggatcgtctgtctcgacat
aattccattagtcaggatgaaaattatcaccatctcccttatgcacagcagcaagcaata
gaggaacctcgagccttccaccctccgaatgtatctccccgtctgttacatcctgctgca
catccaccccagcagaatgcagtaatggttgacatccatgatcagctccatcaaggaaca
gtccctgtttcctatacagtaacaacagtggcaccacatgggattccactctgcacaggc
cagcacattcctgcttgcagtacacaacaggtcccaggatgctctgtggttttcagtgga
caacacctccctgtctgtagtgtgcctcctccaatgcttcaggcatgttcggttcagcac
ttaccagtaccatatgctgcattcccacctctcatttctagtgatccatttcttatacat
cctcctcacctttctccccatcatcctcctcatttgccaccaccaggccagtttgtccct
ttccaaacacagcaatcacgatcgcctctgcagaggatagaaaatgaagtggaactctta
ggagaacatcttcaagtaggaagttttacttaccccccatcagcccatcccccaacatta
cctccatcagctcctttgcagttcttgacacatgatcctttgcatcaggaggtgtccttt
ggagtaccttatcctccatttatgcctcggaggctcacaggacgtagtagatatcgatcc
cagcaaccaataccacctcccccttatcatcccagcttactgccatatgtgttgtcaatg
cttccagtgccacctgcagtgggcccaactttcagctttgaattggatgtggaagatgga
gaagtagaaaattatgaggcccttttaaacctggcagagcgactgggagaggctaaacct
cgaggactgactaaagcagatattgaacaacttccttcttatcggtttaatcctaacaat
caccagtcagaacagactttgtgtgtagtatgcatgtgtgattttgagtcaaggcagcta
cttagagtcttaccctgtaaccacgagttccatgccaagtgtgttgacaaatggcttaag
gcaaatcgtacttgcccaatttgccgagctgatgcttcagaagtgcatcgggattcagaa
tga
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