Sciurus carolinensis (gray squirrel): 124964566
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Entry
124964566 CDS
T08117
Name
(RefSeq) protein zer-1 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124964566
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124964566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
ARM_ARMC5
APC1_C
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
124964566
NCBI-ProteinID:
XP_047380976
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Position
14:6783342..6812482
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AA seq
766 aa
AA seq
DB search
MASDTPESLMTLCTDFCLRNLDGTLGYLLDKETLRLHPDIFLPSEICDRLVNEYVELVNT
ACTFEPHESFFSLFSDPRSTRLTRIHLREDLVQDQDLEAIRKQDLVELYLTNCEKLSAKS
LQTLRSFSHTLVSLSLFGCANIFYEEENPGGCEDECLVNPTCQVLVKDFTFEGFSRLRFL
NLGRMIDGVPVESLLRPLNSLAALDLSGIQTSDAAFLTQWKDSLVSLVLYNMDLSDDHIR
VIVQLHKLRHLDISRDRLSSYYKFKLTRKVLSLFVQKLGNLMSLDISGHMILENCSISKM
DEEAGQTSIEPSKSSIMPFRALKRPLQFLGLFETSLCRLTHIPAYKVSGDKNEEQVLNAI
EAYTEHRPEITSRAINLLFDIARIERCNQLLRALKLVITALKCHKYDKNIQVTGSAALFY
LTNSEYRSEQSVKLRRQVIQVVLNGMESYQEVTVQRNCCLTLCNFSIPEELEFQYRRVNE
LLLSILNPTRQDESIQRIAVHLCNALVCQVDNDHKEAVGKMGFVVTMLKLIQKKLLDKIC
DQVMEFSWSALWNITDETPDNCEMFLNFNGMKLFLDCLKEFPEKQELHRNMLGLLGNVAE
VKELRPQLMTSQFISVFSNLLESKADGIEVSYNACGVLSHIMFDGPEAWGVCEPQREEVE
ERMWAAIQSWDINSRRNINYRSFEPILRLLPQGISPVSQHWATWALYNLVSVYPDKYCPL
LVREGGMPLLRDVIKMATARQETKEMARKVIEHCSNFKEENMDTSR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgatacgcccgagtccctgatgaccctctgtactgacttctgcctacgcaac
ctggatggcaccctgggctacctactggataaggagaccctgcggctacatccagacatc
ttcttgcccagcgagatctgtgaccggctagtcaatgagtatgtggagctggtcaacacc
gcctgcaccttcgagccacatgagagcttcttcagtctcttctctgaccctcgcagtacc
cgcctcacccggatccacctccgtgaggacctggtgcaggaccaggacctggaggccatt
cgcaaacaggacctggttgagctgtacctgaccaattgtgagaagctgtccgccaagagc
ctgcagacgctgcggagctttagccacaccctagtgtccttgagcctcttcggctgtgca
aacattttctacgaggaggagaaccccgggggctgtgaagacgagtgcctcgtcaacccc
acctgccaggtgctggttaaggacttcaccttcgagggctttagccgcctgcgcttcctc
aacctgggccgcatgatcgatggggtccctgtggagtcgctgctgcggccgctcaactct
ctggccgccttggacctctcaggcattcagacgagtgacgccgccttcctaacccagtgg
aaggacagcctggtgtcccttgtgctctacaacatggacctttcagacgaccacatccgt
gtcatcgtccagctgcacaagctgcgacacctggacatctcccgagaccgcctctccagc
tactacaagttcaagctgacccggaaggtgctgagtctctttgttcaaaagcttgggaac
ctgatgtccctggacatctctggtcacatgatcctggagaactgcagcatctccaagatg
gatgaggaagcggggcagaccagcatcgagccttccaagagcagcatcatgcctttccgg
gctctgaagaggccactgcagttcctcgggctttttgagacctccctgtgtcgcctaaca
cacattcccgcctacaaagtaagtggtgacaaaaatgaggagcaggtgctgaatgccata
gaggcctacacggagcaccggcctgagatcacctcacgcgccatcaatctgctttttgac
attgcacgaattgaacgctgcaaccagcttctccgggccctgaagctggtcatcactgcc
ctcaagtgccacaaatatgacaagaacattcaggtgacaggcagcgctgctctcttctac
ctgaccaattccgagtatcgctcagaacagagcgtcaagctgcgccggcaggtcatccag
gtggtgctgaatggcatggaatcctaccaggaggtgacggtgcagcggaattgctgcctg
accctctgcaacttcagcatccccgaggagctggagttccagtaccgccgggtcaacgag
ctgctgctcagcatcctcaaccccactcggcaggacgagtccatccagcgcatcgccgtg
cacctgtgcaacgccctggtctgccaggtggacaacgaccacaaggaagccgtgggcaag
atgggctttgttgtgaccatgctgaagctgattcagaagaagctgttggacaagatatgt
gaccaggtgatggagttctcctggagcgccctgtggaatatcacagatgagacacccgac
aactgcgagatgttcctcaatttcaatggcatgaagctcttcctggactgcctgaaggaa
ttcccagaaaagcaggaactacatcggaatatgctgggactcttggggaatgtggcagag
gtgaaggagctgcggcctcagctaatgacttcccagttcatcagcgtcttcagcaacctt
ctggagagcaaggctgacggcattgaggtttcctacaacgcctgtggggtgctctcccac
atcatgtttgacgggcctgaggcctggggtgtctgtgagccccagcgggaggaggtggag
gagcgcatgtgggcagccatccagagctgggacatcaactcccggagaaatatcaactac
aggtcctttgagccaattctgcgcctccttccccagggcatctctcccgtcagccagcac
tgggcaacctgggccctgtacaacctcgtgtctgtctaccctgacaagtactgccccctg
ctggtcagagaaggcggaatgccccttctgagggacgtgatcaagatggcaaccgcaagg
caggagaccaaggaaatggcccgcaaggtgatcgagcactgcagtaactttaaagaggag
aacatggacacgtccagatag
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