Sciurus carolinensis (gray squirrel): 124964579
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Entry
124964579 CDS
T08117
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like
KO
K28108
shortage in chiasmata 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124964579
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Meiosis-specific proteins
Others
124964579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
124964579
NCBI-ProteinID:
XP_047381003
LinkDB
All DBs
Position
14:21936645..22057764
Genome browser
AA seq
1490 aa
AA seq
DB search
MQDAPLRRSSRTLRRNRSLSAVRKKFSRDALLLRIPSCLYQDENYVGVTDDKYRRPWTRV
SAVSVWGMTDTSILNQWKASFLVEDFLEKKTVTGMVYQVNDEFEDIVPSSNPNSQIEVEE
ENFYTHKDYNEVFTPVKLSEKCPALQAQNQDLFIDNEELIFINDLATYKSQLPTLNTLLS
RLKLFLIKDPLLDFKEQIFKEANFFREQEVLEVCVKEDFYMGKENFCQEKLEDEFESLVS
SSFKQEIDIQPPSELKESLNVIPEIKNCVTENEKLFKRDLSTKHGIDINDKHSSTEIVAI
QSHSEPECKKSGELEIPLTPLHLASQLSSVNSLCTVLQTFPFSSVFKISLLITEESANKY
CMVWQLESCKSSLNSSFRTALRIQEPNSQYSITDLKKIFSIKEESLVINSVKAEWWKPTR
LNLIMAETLKHLNTYLCHDDSSNDTKMEIFLPKKVLQLESQLEHKDCPSSTVLSNEKSIN
DHMLLLQKSPSLTKEVPALLCLSDECVSVERPKKEDQELLDKTSQKKENKDHVEHDCIVP
STESSSSSRIKIASFEHGKKRENDLDLLSDFIMLRNKYKTCTSKTEVTDHDKKDEFQDKE
EYSLTLQEQSPVISTKKMPEKRGVDDVLEVQASDSQCQAYCFLEAAAAPILKKLVCLCAL
PATWKFATVIFDQTRFFLKEQEKVLSDAIHQGMNEEREMTYKHAALLHLLVTIRDVLLTC
NLDTALGYLSNAKDVYRSILSSYLDDIWRQLKIVQIIRRKKPETNYKIQELQCQIQSWMQ
SQQQIKVLIILRMDSDGEKNSLIKILNKIEGLILTISHSNKRKDFLESKGVLNGASSCVI
VHNQNIGADFPWSNFSIVVEYNYVEHSCWSKHCEILNIPYMAFKVILPDTVLKRSTLPDR
FGGFLLEIQIPYVFFASEGILNTPEILQLLESNYNITLVERHCSESLKLFGTTECYVIMT
IDEQTAIILQNLEELNYKKASDNIIMRLMALSFQYSYCWMILYTKEILNSEYHLTEKTLH
HLALIYAALVSSGLKSEELDVKLIICPGVEETALIIRQIADHNLMTSKKDPYEWLDKSWL
EVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWLLLATLCQLQDLLPEVPEKVLKHFCS
ITSLFKISSSSTTKSPQISSPPEESNQTSTFISQNSSLVSSNSVIQEYNEYYPYTGLGER
VQEYANTTSNYNSPLTELREMPIILPSVTSYNQTNYWKDSHCSPKIVQNNPCPANTESKE
TALYSYRNQKDSKSDVFSLGLTQINCETLISPVDTQRGVASNFIKYQKKGTHEAKGTTYK
EVSAPVLSGEDSQPSLPWNFKKNMYEKQNHSFNLKYGAQQTAYDKWYSQKDNLFTNQQQC
LPDELEDFTCESSNAGTKKTSRRESPPVSSLNLFCASDANVNKEFSSFHFYQRAGKPLGQ
KRQLESSSDVGVKESLAGLMYSQLPQLKKRRLIYEKVPGRIDGQTRLKFF
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcacctctaagaagaagcagcagaactctaagaagaaatagatctctgagt
gcagttagaaagaagttttccagagatgctttattgcttcgaatcccttcatgtttatat
caagatgaaaattatgtgggagtgactgatgataaatataggcggccatggacaagagtc
tcagcagtttcagtttggggaatgacagatacatcaatcttgaatcaatggaaagcaagt
ttccttgtggaagatttccttgagaaaaagacagttacaggaatggtataccaagttaat
gatgaatttgaagacatcgttccaagttcaaatccaaactcccaaattgaagtagaggaa
gaaaatttctacacccataaggattacaatgaagtctttacacctgtcaagttatcagaa
aaatgtccagcacttcaggcacagaaccaagatttatttattgataatgaagaactaatt
tttataaatgatttggcaacctataaaagtcagctaccaactttgaatactctcttgagt
agactaaaactctttttgataaaggacccccttttagacttcaaagaacagattttcaaa
gaagctaattttttcagggaacaagaagttttggaagtttgtgtgaaagaagatttttat
atgggtaaagaaaacttttgtcaggagaaactagaagatgaatttgaatccttagtatct
tcaagcttcaaacaagaaattgatattcaaccgccctcagaactgaaggagtcactaaat
gtaataccagaaataaaaaattgtgtaaccgaaaatgaaaaactttttaaaagagatctt
tctaccaagcatggaattgatattaatgacaaacatagctccacagagattgtggctatt
caaagccacagtgaaccagagtgcaaaaaatcaggagaattggaaataccactaactcct
ctgcacctagcaagtcaactttcttcagtaaattcattatgtacagtacttcagacattt
ccattttcttctgtttttaaaattagtttgcttattactgaagaatcagctaataaatac
tgtatggtgtggcaattagaaagctgtaaaagctctttgaactcatcttttcgtacagca
ctaagaattcaagagcccaacagtcaatattcaattacagatttgaaaaagatattttct
attaaagaagaaagccttgtgattaattctgtaaaggcagaatggtggaaaccaacaaga
ctaaatctaataatggcagaaactttgaaacatctaaatacatatttatgtcatgatgat
tcatctaatgatactaaaatggagatatttttgcctaaaaaagtgcttcaattggaatca
cagctagaacataaagactgtccctcatcaactgtacttagtaatgagaaatctataaat
gatcatatgttgctgctacaaaagagcccatccctgacaaaagaagtaccagctcttttg
tgtttgtctgatgaatgtgtatctgttgaaagaccaaaaaaggaagatcaggaactactt
gataaaacaagccaaaagaaggaaaacaaagatcatgttgaacatgactgcatagtgcca
tccactgaatcatcttcctcttcaagaattaaaatagcttcttttgaacatggtaaaaag
cgggagaatgatttggaccttttgagtgactttattatgctgcgaaataaatacaaaact
tgcacctcaaagactgaagtcacagaccatgataaaaaagatgaatttcaagataaagaa
gaatattctttgactcttcaagaacagagtccagttatttccactaaaaaaatgcctgag
aaaaggggagtggatgatgtccttgaggttcaagcatcagatagccagtgccaggcatac
tgtttcctagaagcagcagctgctcctatcttaaaaaaacttgtatgcctctgtgccctc
ccagctacttggaagtttgccactgttatttttgaccaaacaaggttctttttgaaggaa
caagaaaaagtactaagtgatgccattcaccaaggtatgaatgaggaaagagaaatgaca
tacaagcatgctgctctcttacaccttctggtaacaattagagatgtacttttaacatgc
aacttggacacagcattgggatacttgtcaaatgcaaaagatgtctacagaagcatttta
agttcctatttggatgacatttggagacagctgaagattgtacagattattaggagaaaa
aagcctgaaacaaactataagatacaagaactacaatgccagatacaaagttggatgcaa
agtcagcagcaaattaaggtgctaattatactaagaatggactcagatggtgaaaaaaat
tcactcattaaaatccttaacaaaatagaaggtttaatattgactatctctcattcaaat
aaaagaaaagattttctggaatctaaaggtgttttaaatggtgcaagttcctgtgtgatt
gtacataatcaaaatattggagcagattttccctggagcaatttctcaattgtggtggaa
tataattatgtagaacactcttgttggtctaaacactgtgaaattttgaatattccttat
atggcctttaaagtgattcttccagacacagttttaaagagaagcaccttgccagataga
tttggtggttttcttctggaaattcagattccatatgtgttttttgcctccgaaggaatt
cttaatactccagaaatacttcagctgctagaatctaactacaatatcacactagtggaa
agacactgcagtgagtcactgaaactctttggaactacagaatgttatgtaattatgaca
attgatgaacagactgctataattttacagaacctagaagaattgaattacaagaaggca
tcagacaatatcattatgagattgatggcattgtcattccaatacagctactgttggatg
atattatataccaaagaaatattaaattcagagtatcatcttacagaaaagacacttcat
cacctagcactgatttatgcagctttggtttcctctgggcttaaatctgaagaactggat
gtaaagcttataatttgcccaggagtagaagagactgcattaataattcgacaaattgct
gaccacaatttgatgacctcaaagaaagatccttatgaatggctggataaatcctggctt
gaagtttcaccatctaaggaagaaatgtacttacttgattttccatgtattaacccattg
gtggctcagcttatgttaaataaaggaccctcactgcattggttattattagcaactctg
tgtcaacttcaggacctcctacccgaagttccagaaaaagtgttaaagcatttttgtagc
attacttccttattcaagattagttcttcctccacaacaaaatcacctcaaatttcatca
cctccggaagagagtaatcagactagtacctttatttctcagaattcatctttggtctct
tcaaactctgtcattcaagaatataatgaatattacccatacacaggcttaggggagaga
gtgcaggaatatgcaaatactacttcaaattataactctcctcttacggaactaagagaa
atgccaattattttaccatctgtgacttcttacaatcagactaactattggaaagactcc
cattgtagccccaagatagtgcagaataatccttgtccagctaatacagaatcaaaggaa
acagctctttactcctatcgaaaccagaaagattccaagtcagatgtcttttctttgggc
ctaacacaaataaattgtgaaactctaatatcaccagttgacactcagaggggagttgcc
tctaattttataaaatatcagaaaaagggaacacatgaagccaaaggaaccacatataaa
gaagtatctgctccagtcctttcaggggaggactctcaaccttctcttccctggaacttt
aaaaaaaacatgtatgaaaaacagaatcactcattcaacttaaaatatggagcacagcag
actgcctatgacaaatggtactctcagaaagataatttattcactaatcagcaacaatgt
ctacctgatgaattagaagacttcacatgtgaaagttcaaatgctgggactaaaaagact
tcgcggagagaatcgccacctgtttccagtttgaatttattctgtgcttctgatgctaat
gtaaataaagaattcagtagctttcatttctaccaaagagctggaaaacctttaggacag
aaaaggcaacttgaatcttcatctgatgtgggagtcaaggaatcattagcaggcttaatg
tactcacagctaccacaactcaaaaaacgacgtctaatatatgaaaaagtccctggaaga
atagatggacaaacccggctgaagtttttctga
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