KEGG   Sciurus carolinensis (gray squirrel): 124964659
Entry
124964659         CDS       T08117                                 
Name
(RefSeq) interferon alpha-5-like
  KO
K05414  interferon alpha
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04060  Cytokine-cytokine receptor interaction
ncar04151  PI3K-Akt signaling pathway
ncar04217  Necroptosis
ncar04620  Toll-like receptor signaling pathway
ncar04621  NOD-like receptor signaling pathway
ncar04622  RIG-I-like receptor signaling pathway
ncar04623  Cytosolic DNA-sensing pathway
ncar04630  JAK-STAT signaling pathway
ncar04650  Natural killer cell mediated cytotoxicity
ncar04936  Alcoholic liver disease
ncar05152  Tuberculosis
ncar05160  Hepatitis C
ncar05161  Hepatitis B
ncar05162  Measles
ncar05163  Human cytomegalovirus infection
ncar05164  Influenza A
ncar05165  Human papillomavirus infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05168  Herpes simplex virus 1 infection
ncar05169  Epstein-Barr virus infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05171  Coronavirus disease - COVID-19
ncar05200  Pathways in cancer
ncar05320  Autoimmune thyroid disease
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    124964659
   04151 PI3K-Akt signaling pathway
    124964659
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124964659
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    124964659
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124964659
   04621 NOD-like receptor signaling pathway
    124964659
   04622 RIG-I-like receptor signaling pathway
    124964659
   04623 Cytosolic DNA-sensing pathway
    124964659
   04650 Natural killer cell mediated cytotoxicity
    124964659
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124964659
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124964659
   05161 Hepatitis B
    124964659
   05160 Hepatitis C
    124964659
   05171 Coronavirus disease - COVID-19
    124964659
   05164 Influenza A
    124964659
   05162 Measles
    124964659
   05168 Herpes simplex virus 1 infection
    124964659
   05163 Human cytomegalovirus infection
    124964659
   05167 Kaposi sarcoma-associated herpesvirus infection
    124964659
   05169 Epstein-Barr virus infection
    124964659
   05165 Human papillomavirus infection
    124964659
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    124964659
  09163 Immune disease
   05320 Autoimmune thyroid disease
    124964659
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124964659
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    124964659
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ncar04052]
    124964659
Cytokines and neuropeptides [BR:ncar04052]
 Cytokines
  Interferons
   124964659
SSDB
Motif
Pfam: Interferon IL28A Glyco_hydro_57
Other DBs
NCBI-GeneID: 124964659
NCBI-ProteinID: XP_047381183
LinkDB
Position
14:49512070..49512642
AA seq 190 aa
MALPLAVLLALVVLSYKSTCSLGCDLPQIYNLGLETPERNEKGALMLLEKMRRVPTLSCL
NYRKDFAFPQEQLDGEQVQKAQAVSVLHEMTQQVFNLFSTQESFAAWDKTLLDTFLTGLY
QQLDDLKACVTQQVGVEEAPLRTLRKYFHRLTVYLKGRKYLPCAWEVVRAEIVRSFSSSA
NLYGRLRSKE
NT seq 573 nt   +upstreamnt  +downstreamnt
atggccttgcccttggctgtcctgctggccctggtggtgctcagctacaagtccacctgt
tctctgggctgtgacctgcctcagatctacaacctgggtcttgaaactcctgagagaaat
gagaagggggccctgatgctcctggagaaaatgaggagagttcccaccttgtcctgcctc
aactacagaaaggactttgccttcccccaggagcagttggatggtgagcaggtgcagaag
gctcaagctgtctctgtcctccatgagatgacccagcaggtcttcaacctcttcagcacc
caggagtcctttgctgcttgggacaagaccctcctggacacattcctcactggcctctat
cagcagctggatgacctgaaagcctgtgtgacccagcaggtgggggtggaagaggctccc
ctgaggactctgaggaagtacttccacaggctcactgtctacctgaaggggaggaaatac
ctcccttgtgcctgggaggtggtcagagcagaaatcgtgagatccttctcttcatcagca
aatttgtatggaagactaaggagtaaggaatga

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