Sciurus carolinensis (gray squirrel): 124964683
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Entry
124964683 CDS
T08117
Name
(RefSeq) interferon alpha-5-like
KO
K05414
interferon alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04060
Cytokine-cytokine receptor interaction
ncar04151
PI3K-Akt signaling pathway
ncar04217
Necroptosis
ncar04620
Toll-like receptor signaling pathway
ncar04621
NOD-like receptor signaling pathway
ncar04622
RIG-I-like receptor signaling pathway
ncar04623
Cytosolic DNA-sensing pathway
ncar04630
JAK-STAT signaling pathway
ncar04650
Natural killer cell mediated cytotoxicity
ncar04936
Alcoholic liver disease
ncar05152
Tuberculosis
ncar05160
Hepatitis C
ncar05161
Hepatitis B
ncar05162
Measles
ncar05163
Human cytomegalovirus infection
ncar05164
Influenza A
ncar05165
Human papillomavirus infection
ncar05167
Kaposi sarcoma-associated herpesvirus infection
ncar05168
Herpes simplex virus 1 infection
ncar05169
Epstein-Barr virus infection
ncar05170
Human immunodeficiency virus 1 infection
ncar05171
Coronavirus disease - COVID-19
ncar05200
Pathways in cancer
ncar05320
Autoimmune thyroid disease
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
124964683
04151 PI3K-Akt signaling pathway
124964683
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124964683
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124964683
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124964683
04621 NOD-like receptor signaling pathway
124964683
04622 RIG-I-like receptor signaling pathway
124964683
04623 Cytosolic DNA-sensing pathway
124964683
04650 Natural killer cell mediated cytotoxicity
124964683
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124964683
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
124964683
05161 Hepatitis B
124964683
05160 Hepatitis C
124964683
05171 Coronavirus disease - COVID-19
124964683
05164 Influenza A
124964683
05162 Measles
124964683
05168 Herpes simplex virus 1 infection
124964683
05163 Human cytomegalovirus infection
124964683
05167 Kaposi sarcoma-associated herpesvirus infection
124964683
05169 Epstein-Barr virus infection
124964683
05165 Human papillomavirus infection
124964683
09171 Infectious disease: bacterial
05152 Tuberculosis
124964683
09163 Immune disease
05320 Autoimmune thyroid disease
124964683
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124964683
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
124964683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ncar04052
]
124964683
Cytokines and neuropeptides [BR:
ncar04052
]
Cytokines
Interferons
124964683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
IL28A
Motif
Other DBs
NCBI-GeneID:
124964683
NCBI-ProteinID:
XP_047381246
LinkDB
All DBs
Position
14:complement(49644400..49644972)
Genome browser
AA seq
190 aa
AA seq
DB search
MALPLAVLLALVGLSYKSTCSLGCDLPQIYNLGLETPERNEEGVLMLLEKMRRVPTLSCL
NYRKDFAFPQEQTDGEQVQKAQAVSVLHEMTQQVFNLFSTQESFAAWDKILLDTFLTGLY
QQLDDLKACVTQQVEVEETPLRALRKYFHSLTVYLKERKHLPCAWEVVRAEIVRSFSSSA
NLYGRLRSKE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcccttggctgtcctgctggccctggtggggctcagctacaagtccacctgt
tctctgggctgtgacctgcctcagatctacaacctgggtcttgaaactcctgagagaaat
gaggagggggtcctgatgctcctggagaaaatgaggagagttcccaccttgtcctgcctc
aactacagaaaggactttgccttcccccaggagcagacagatggtgagcaggtgcagaag
gctcaagctgtctctgtcctccacgagatgacccagcaggtcttcaacctcttcagcacc
caggagtcctttgctgcttgggacaagatcctcctggacacattcctcactggcctctat
cagcagctggatgacctgaaagcctgtgtgacccagcaggtggaggtggaagagactccc
ctgagggctctgaggaagtacttccacagtctcactgtctacctgaaggagaggaaacac
ctcccttgtgcctgggaggtggtcagagcagaaatcgtgagatccttctcttcatcagca
aacttgtatggaagactaaggagtaaggaatga
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