Sciurus carolinensis (gray squirrel): 124964770 Help Entry 124964770         CDS       T08117                                  Name (RefSeq) collagen alpha-1(XXII) chain   KO K16630   collagen type XXII alpha Organism ncar  Sciurus carolinensis (gray squirrel) Pathway ncar04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:ncar00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     124964770 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen VWA VWA_2 Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  124964770 NCBI-ProteinID:  XP_047381384 LinkDB All DBs Position 1:4952700..5188477 Genome browser AA seq 1613 aa AA seqDB search MLVAKSKRATISLQGNAAACLLWTLLLWSGDGGCQAQRAGCKTVHYDLVFLLDTSSSVGK EDFEKVRQWVANLVDTFEVGPDRTRVGVVRYSDGPITAFELGRFSSREEVKAAARRITYH GGNTNTGDALRYITSRSFSPQAGGRPGDRAFKQVAILLTDGRSQDLVLDAAAAAHAAGIR IFAVGVGAALKEELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGD RFKHTNGGTKEITGFDLMDLFSVKEILGRRENGAQSSYVRMGSFPVVQRTEDVFPQGLPD EYAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYSAVGAMTDAVRVVF RGPRVSHLFDRDWHKVALSIQAQNVSLYIDCALVQTLPIQERENIDIQGKTVIGKRLYDS VPIDFDLQGIVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPQPLQSPTPGNEQIGFLKT INCSCPPGEKGEKGADGPVGLPGLKGDMGATGPLGAPGPKGEKGDMGRGSFVQGEKGEKG SLGLPGPPGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGQVGVPGLQGERG ERGPHGEKGERGLDGFPGKPGEAGEQGRPGPPGVAGPQGEKGDMGPAGPPGVPGSVVQRE GLKGEQGAPGPRGHQGPPGPPGAPGLMGPEGRGGPPGLQGLRGKKGDVGPPGTPGSLGLQ GPPGPPGVPGPPGPGGPPGLPGEIGFPGKPGPPGHAGSPGQDGPSGPPGLPGSKGDPGER GEGGLPGKPGPRGEVGEQGLAGHPGEKGEAGLPGAPGFPGVRGEKGNQGEKGELGLPGPK GDPGEKGEAGPAGPPGLPGTTSLFTPYPRMPGEQGPKGEKGDPGVPGEPGPQGRPGELGP RGPIGPPGGKGQDGTHGAPGAAGNPGAPGPAGPPGPSGPPGILGSTGLRGPPGKDGERGE KGAAGEEGSPGPAGPRGDPGAPGLPGPPGKGIDGEPGLRGSPGAPGPPGTKGDRGAPGIP GSPGSRGDPGIGVAGPPGPSGPPGDKGPPGLRGLPGFPGPQGPAGQDGTPGNPGERGPPG KPGLSSLLSPGDINLLVKDVCNDCPPGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDAG PQGLPGPPGVAGPQGSQGERGADGEAGQKGDQGHPGVPGFMGPPGNPGPPGADGVAGAAG PPGIQGPPGKEGPPGPQGPSGIPGVPGEEGKQGRDGKPGPPGEPGKAGEPGLPGAEGSRG PPGFKGHTGDSGAPGPRGEPGATGPPGREGAPGKDGDAGPAGPQGPRGPRGPPGNSGSPG SPGDPGRPGSPGQKGNKGENGSPGLPGFLGPRGPPGEPGEKGVPGKEGAPGKPGEPGSKG ERGDPGIKGDKGLPGGKGQPGDPGIPGHKGHTGLMGPQGPPGESGAAGPPGPPGQPGFPG LRGESPSMDTLRRLIQEELGKQLETKLAYLLAQLPPAHVKASQGRPGPPGPPGKDGLPGR AGPMGEPGRPGQGGLEGPSGPMGPKGERGSKGEPGTPGVGLRGEMGAPGIPGQPGEPGYA KDGIPGSPGPQGETGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPGNVKGP NT seq 4842 nt NT seq  +upstreamnt  +downstreamnt atgcttgtcgccaagagcaagagagccaccataagcctccaagggaacgccgcggcctgc ctcctctggacgctgctgctgtggagtggagatggcggctgccaggcccagcgggcaggc tgcaagactgtgcactacgatctggtgttcctcctggatacctcctccagcgtgggcaag gaggactttgagaaggtccggcagtgggtagccaatctggtggacaccttcgaggtgggc ccggaccgcacccgtgtgggtgtggtgcgctacagcgacgggcccatcactgccttcgag ttgggccgcttcagttcgcgtgaggaggtcaaggctgcagcccggcgcatcacctaccat ggtggcaacaccaacaccggcgacgcgctgcggtacatcaccagccgcagcttctccccg caggccggcgggcggcccggagaccgcgccttcaagcaggtggccatcctgctgaccgac ggccgcagccaggacctggtgctggacgccgcggccgccgcccacgcagcgggcatccgc atcttcgcggtgggcgtgggtgcggcgctgaaggaggagctggaggagattgcctcggag cccaagtctgcgcatgtcttccacgtgtccgacttcaacgccatcgacaagatccgcggc aagctgaggcgccgcctctgtgaaaatgttctctgccctagtgtccgagtggaaggagat cgcttcaagcacaccaatggaggcaccaaggagatcacaggttttgacctgatggatttg ttcagtgtgaaggaaatcttggggaggagagagaacggagcacagagttcctacgttcgg atgggatcctttcctgtggtgcagaggacagaggatgtgtttccccaaggtcttcctgat gagtatgcctttgtcacaaccttccggttcaggaaaacatctcggaaagaagactggtat atctggcaggtcatcgaccagtatggcatcccgcaggtctccatccgtctggatggtgag aacaaggctgtggagtacagcgctgtgggcgccatgacagacgccgtcagggtggtcttc cgaggtccccgtgtcagccacctctttgaccgggactggcacaaggtggccctgagcatc caggcccagaatgtctccctctacatcgactgtgcactggtgcagacactgcccatccag gagagagagaacatcgacatccagggcaagactgtgattggcaagcgcctgtatgacagc gtgcccattgactttgacctacaagggatcgtgatttactgtgactcaagacatgcagag ctggagacttgctgcgacatcccctcagggccgtgccaggtgaccgtagtgacagagcct ccgccccaaccccttcagtcacccacgcctggcaatgaacagattgggttcttgaagacc atcaactgctcctgcccacctggagaaaagggcgagaagggtgcagatggccctgtggga ctccctggtctgaagggagacatgggagccactgggccactgggtgctcctggacccaag ggagaaaaaggggacatgggcagaggatcatttgtccaaggagaaaagggtgaaaagggt tccctgggcctgccaggtcctcctgggagagatggcagtaaaggcatgagaggggagcca ggagagctgggagagcccgggctgcctggagaagtgggcatgcggggcccccaaggacca cctgggcttccgggacctcctgggcaggttggagttcctggtctccaaggagaacgtggg gaaagaggaccgcatggagaaaagggagagcgaggcctggatggatttccagggaagcca ggggaggcaggcgaacagggcagacctggccctcctggtgtggcaggaccccagggagag aagggagacatgggacctgcaggacctcctggtgtgccaggctctgtggtgcagagagaa ggcctgaagggagagcagggagctccgggaccaagaggtcaccagggcccacctggaccc ccgggagctccgggtctgatgggtccagaaggcaggggtggaccccctggtttgcaaggt ctccgagggaagaaaggcgatgtgggtccaccaggaacccctggatcgctggggctgcag ggcccccctggaccacctggtgtcccaggaccccctggaccaggaggtcccccgggttta cctggagagattggcttccctgggaaacctgggcctcctggccatgcggggtcacctgga caggacgggccgagtgggccaccaggcctgccaggatccaagggagaccccggggagaga ggggaaggcggcctgcctgggaagcctggacctcggggtgaagttggggagcagggcctg gcaggccaccctggagagaagggagaagcaggcctcccaggtgctccaggcttcccaggt gtgcgtggagaaaaaggaaaccagggagaaaagggtgaactgggacttcctggcccgaaa ggtgacccgggtgagaagggtgaagccggccctgcaggtccccctgggctacctggaaca acctccctgttcacaccatatccaaggatgccaggagaacaagggccaaagggagagaaa ggcgatccgggagtgcctggggagccgggaccacagggacgtcctggagagttgggcccc cggggacccattggacctccgggtggcaagggacaagatggcacccatggggctcctgga gcagctggaaaccctggtgctccaggacctgcagggcccccgggccccagcggcccccct ggaatcctgggctccactggcctcagaggtccccctgggaaagacggggagcgtggtgag aagggagcagcaggggaagaaggaagcccaggacctgcaggccccaggggtgatcctggt gctcctgggcttcctgggccgcctggaaaagggatagatggcgagccgggtctgcgtgga tcacctggagcacctgggcccccaggaaccaagggggaccgaggagcacctgggatccct ggctctcctggtagtcgtggtgacccaggcatcggggttgctggccctcccggcccttcc ggaccaccaggagacaaagggcccccgggattgcgaggcttacctggatttcccggcccc cagggaccagctggtcaggatggcacaccagggaatccaggagaaagagggcctcctgga aagccaggcctttcttcactactgtctccaggggacataaatctcttagttaaggacgtg tgcaatgactgccctcctggccccccaggcctccctggtctgccaggatttaaaggggac aaaggtcttccgggaaagccagggagagaaggcacggaagggaaaaagggagatgctggg ccccaaggcctccctgggcccccaggagtagctggaccacaggggagccaaggagagcgt ggtgcggatggcgaggctggacagaaaggcgatcagggtcatcctggagttccaggcttc atggggcctccagggaatcctgggccaccaggagcggatggagttgcaggagctgctgga ccaccaggaattcaagggccaccagggaaagaaggtccacctggaccccaaggcccatct ggaatacctggagtcccgggtgaagaaggcaagcagggcagagatggaaagccaggtccc cctggagagccaggcaaagccggagagccaggtctaccaggagcagagggttcccgaggc ccgcctggcttcaagggacacactggtgattcaggagcacctggtccccggggagagcct ggtgccacaggtccccctggccgggaaggagcaccagggaaagatggtgatgctggacct gcagggccacagggtccccgagggccaaggggcccaccgggtaacagtggatccccaggc tctccaggagaccctggtcgcccaggaagcccaggccagaaggggaacaaaggagaaaac ggcagccctggacttcctggcttcctgggtccccgggggcctccgggagaaccgggagag aaaggagtgccaggcaaagagggcgcccctggcaagcctggagaacccggatccaaaggc gaaaggggagatcctgggatcaaaggggacaaaggtctgcctggtgggaagggccagcct ggggaccctggaattccaggccacaaaggccacacaggcttgatgggcccccaaggacct cctggggagagtggagcagcagggcccccagggcctccaggccagccaggctttccagga ctgaggggggagtctccgtccatggacaccctgcggcggctcatccaggaagagctgggg aagcagctggaaaccaaactcgcctacctcctggcccagctgcccccggcacacgtgaag gcatctcaaggcagacctgggcccccaggacccccaggaaaagatggacttccgggtcgg gcagggcccatgggagagccaggacgccctggccaggggggtctggaaggaccctctgga ccgatgggtcccaaaggtgaacgaggatccaaaggtgagccaggtacacctggagttggc ctccgaggagagatgggagcccccggaattccaggtcaacctggagaacctggctatgct aaagatggaatcccggggagccctggccctcaaggagagacaggaccagctggacaccct ggccctccaggcccacctgggccccctggccagtgtgacccttcccagtgtgcctacttc gccagccttgctgcccggccgggaaatgtgaaaggcccctag

DBGET integrated database retrieval system