Sciurus carolinensis (gray squirrel): 124964847
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Entry
124964847 CDS
T08117
Name
(RefSeq) snRNA-activating protein complex subunit 4-like isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124964847
03021 Transcription machinery [BR:
ncar03021
]
124964847
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
124964847
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
124964847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
124964847
NCBI-ProteinID:
XP_047381495
LinkDB
All DBs
Position
14:1291402..1315626
Genome browser
AA seq
1441 aa
AA seq
DB search
MDVDAEREKITKEIKKLERILDPSSSSIHVEVSESSLDSDSDADSLPSEDLDAAVPPILE
EERWGEASNDEEDPKDKALPEDPETCLQLNMVYQEVIQEKLAEVSLLLAQNREQQEEILW
DLAGSRGPRVKDGKSLPPNMYIGHFMKPYFKDRVTGVGPPANEETREKAAQGIKAFEELL
VTKWKHWEKALLRKSVVSDRLQRLLQPKLLKLEYLHQKQSRVSSESERQALEKQVRETEK
EIQDINQLPEEALLGNRLDNHDWEKISNVHFEGGRSAEEIQKFWQSSEHPSINKQEWSVE
EVERLRAIAATRGHLEWHLVAEELGTSRSAFQCLQKFQQHNKALKRKEWTEEEDRMLTQL
VQEMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPNLKKGFWAPEEDAKLLQAVAKYG
EQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGRWNAKEEEQLMELIEKHGVGHWAKIA
AELPHRSGAQCLSKWKVMAGKKSLQRRRRRPCRRVRWSSGSSSSSGSYSSGGSSSSSSED
PETELEETQKGHRVLLPPQYMVPDMDLWVPARQNTNQLWSGGARGCSGHPAAFPGPSKES
DATQGDNRAMSTLALAPRELSQREAPSRTHSTILRGAQDPHSADTHPANLEELAFKGGQH
LLKVPLATVQRVLRTNTAVHDRALKERLRQPAPPDAPPGPGPGDSMAGPYLWQLRHGTFQ
NGQQRRKYTLHRRLLERRLLFAVTPWVGDITLPSTQAPSTPAAVLTRADGIRMQLEHARL
ASTPVFTLLIQLLQIDTAGCMDVVRERKAQTPTPLRPGTRGLPACLPQAPSCAQSTPGCL
FPNMPTWNATKSASHKGSTGLESRQATFTSSQVPAPVPRGPRPKPKTVSELLREKRLREA
RVRKATQGPPLPPQLLVSPVILRPPILPAPRPQGPLATGPVSSTDCSGPGASMAASACPS
GSWQETGVSAKDKGLPTLQALPLSPAPSPGPVPVVCPLSSLGQSQAPTTSRKQGLPEAPP
FFPAAPSPTQLPIQPLNLTPALGTHTSGPPLAASIPLPVTWVLTAQGLLPVPVPAVVGLP
GPVKTPGSTGLPAELPPPPTESAACSSQLHASADTEPVPSNKTDPSASPTCPPSQSAVEV
GSHVPGAPVEAQVVREASVPRTHSQTNDPEAEPPWHSQLPASVGTGPTNDSGGTRETGEP
LGLEKPQLPGPEKGALELGLLSQESEAAIRQWLRGQEGVRVPPLGNRLPYQPPTLSSLRA
LSNLLVHKKALEHKAASLVASGAAGALQASLELVRRQLQDNPAYLLLKARFLAAFTLPAL
LATLAPHGIRTTLSMATRATLSQSEEEEDLSERELQDSDSWLGCESSGTQACPAGTVPIQ
GALDSGEGSVPSHLDTSDDLDVLRTRRARHTRKQRPLREQQDKDAGPMLAPRIHHPPCRR
K
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagacgctgaaagagagaaaataacaaaggagataaagaagctggaaagaatt
ttggatcccagttcctctagcatccatgtggaggtttcagaatcaagtcttgattcggat
tctgatgcagattcgctgcccagcgaggacttggatgctgctgtgcccccgatcttggaa
gaagaaaggtggggtgaggccagcaatgacgaggaggaccccaaggataaagccctccct
gaagaccccgagacctgtctgcaactgaacatggtctaccaggaagtcatccaagagaag
ctggcagaggtcagcctgctgttggcccagaacagggaacaacaggaggagatcctatgg
gatctggctgggtccagaggccccagggtgaaggatggcaagagcctgcccccaaacatg
tacattgggcacttcatgaagccatacttcaaagacagggtcactggagtggggcctcct
gccaatgaagagacgcgagagaaggctgcccagggaatcaaggctttcgaggagctcctg
gtgaccaagtggaaacactgggagaaagctttgctcagaaagtcagtggtgagtgaccgc
ctgcagcgcctgcttcagcccaagttactcaagctcgagtacttgcaccagaagcagagc
cgggtctccagtgagtcggagcggcaggccctggagaagcaggtcagggagacggagaag
gagatccaggacatcaaccagcttccagaggaggccttgttgggaaacaggctggacaac
catgactgggagaagatttccaatgtccactttgaaggaggccgtagcgcagaggagatc
cagaagttttggcagagctctgagcatccaagcatcaacaagcaggagtggagtgtggag
gaggtggagcggctgagggccattgcggccacacgtggccacctggagtggcacttggtc
gcagaggagctggggaccagccgcagtgccttccagtgcttgcagaaattccagcagcac
aacaaagccctgaagcgcaaggagtggacagaggaggaggaccgaatgctcacccagctg
gtccaggagatgcgcgtggggagtcacatcccctatcgcagaattgtctactacatggag
ggcagagactccatgcagctgatctaccggtggaccaagagcttggatcccaacctgaaa
aaggggttctgggccccagaggaagatgctaaattgcttcaagctgttgccaagtatggg
gagcaggattggtttaagatccgagaagaggtgcctggtaggagcgacgcccagtgcaga
gatcgatatctcagaagattacatttcagcttgaaaaaggggcgatggaatgcaaaagag
gaggagcagttaatggaattaatagagaaacacggcgttggtcactgggcaaagatagct
gccgaactgccccaccgctcgggtgcccagtgtctgagcaagtggaaggtcatggcgggg
aagaagagtctccaaaggaggcgacggaggccctgtcgcagagtccgctggagctctggc
agcagcagcagcagcggcagctatagcagtgggggcagcagcagcagcagcagtgaggat
ccagagacagagctggaagaaacccagaagggccacagagtgctgctgcccccacaatac
atggtgccagacatggacctctgggtccctgccaggcagaacaccaaccagctgtggagt
ggaggggccaggggctgctcaggacaccctgctgctttccctggcccttccaaggagtct
gatgccacccaaggtgacaacagggcaatgtccaccctagccttggctcctcgagagttg
agccagagagaggccccctccaggacccacagtaccatcctgagaggtgcccaggaccca
cattcggcagatactcacccagcaaacctggaggagctggcctttaagggtggacagcat
ctgctgaaggtacccctagcgacggtgcagagggtactgaggaccaacacagccgtccat
gaccgtgcactgaaggagaggctgaggcagccagccccacctgacgcacccccagggcct
ggccctggtgacagcatggctgggccttacctatggcagctgaggcatggaaccttccag
aatggacagcagcgccggaaatacactctgcaccggaggctcctcgagcgcaggcttctg
tttgctgttacaccctgggtgggtgacatcaccctcccctccacacaggccccctccacg
cctgcagcagtgctcactagagccgacggcatcaggatgcagttagagcacgcccggctg
gccagcaccccagtgttcacgctgctgattcagctgttgcagatcgacactgctggctgc
atggatgtcgttcgagagaggaaggcccagacacccacaccactccgacctggcacccgg
ggcctgccagcttgccttccacaggctccctcctgtgcccagagcaccccaggatgcctc
ttcccaaatatgccgacttggaatgctacaaagagtgctagtcacaaagggagcacagga
ctggagtcccgccaggctactttcacctcatcccaagtgcctgcaccagtcccacgcggc
ccccgccccaagcctaagactgtatcagagctgcttcgggagaagcggcttcgggaggca
cgtgtgaggaaggccacccagggcccccctctgcctccccagctgctggtctcacctgtg
attcttcgaccccctatcctgccagcccctcggcctcagggtcccctagccacaggtcct
gtgtccagcacagattgctctgggcctggggcctccatggcagccagtgcatgcccttct
ggctcctggcaggagactggggtttcagccaaggacaagggactccctaccctccaagcc
ctgcctctcagtcctgccccaagccctggcccggtccctgtggtctgccctctgagcagt
ctgggacagtctcaggcccctaccacgtcccggaagcagggcctgcctgaggctccgccc
tttttccctgcagcccccagccccactcagctccccattcagcccctcaacctgacacct
gctctgggcacacacacaagtgggcccccactggcagccagcatccccttgcctgtcacc
tgggtgctcacggcccaggggctgctccccgtgcccgtgccagcagtggtgggcctccct
gggccagtgaagacccctggttccacggggctcccagcagagctgccaccgcccccgacg
gagtctgcagcttgctcttcgcagctccacgccagtgcggatacagagccagttccttct
aacaagactgacccctcagcttccccaacgtgccccccatcccagagtgctgtagaagta
ggtagtcatgttcctggtgcccctgtagaggcccaggtggtcagggaggcctcagtgcca
aggacacattcccagaccaatgaccctgaagcagagcccccctggcacagccagctccct
gcctctgtcggcactggtcccacaaatgattcaggagggacacgggagactggggaacct
ctgggtctagagaagccacaattgcctgggcctgagaagggggccttggagctgggcctg
ctctcccaggagagtgaagcggccatacgacagtggctgagaggacaggaaggggttcgt
gtgcccccactggggaacaggctgccctaccagccccccaccctgtccagcctgcgagca
ctgtccaacctcctggtccacaagaaggccttggagcacaaggctgcctccctagtagcc
agtggggcagctggggccctgcaggcttcactggagctggtgcgaaggcagctgcaggac
aacccagcctacctcttgctgaaggcacggttcctggctgccttcaccctgcccgccctc
ctggccaccctggccccccacggcatccgcaccaccctgtccatggccacaagggccact
ctctctcagagtgaggaggaggaggacctgagtgagcgggagctccaggacagcgacagc
tggttaggctgcgagtctagtggaacacaggcgtgtccggcgggcacagtccccatccag
ggagccctggattctggcgagggctctgtcccctcccacttggatacctctgatgacctc
gatgtgctcaggactcggcgtgcccggcacacccggaagcagagacctctgcgtgagcag
caggacaaggacgcagggcccatgcttgccccaagaatccaccacccaccctgcaggaga
aaatag
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