Sciurus carolinensis (gray squirrel): 124964914
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Entry
124964914 CDS
T08117
Name
(RefSeq) laminin subunit gamma-3-like isoform X1
KO
K06247
laminin, gamma 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar05145
Toxoplasmosis
ncar05146
Amoebiasis
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124964914
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124964914
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124964914
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124964914
09162 Cancer: specific types
05222 Small cell lung cancer
124964914
09172 Infectious disease: viral
05165 Human papillomavirus infection
124964914
09174 Infectious disease: parasitic
05146 Amoebiasis
124964914
05145 Toxoplasmosis
124964914
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
124964914
NCBI-ProteinID:
XP_047381626
LinkDB
All DBs
Position
14:complement(5106140..5156572)
Genome browser
AA seq
1585 aa
AA seq
DB search
MAAAALLLGLALAAPRAGAGMGACYDGAGRPQRCLPEFENAAFGRRAEASHTCGSPPEDF
CPHLGAPRAGPQCQRCDAADPRLHHNASYLTDFHSQDESTWWQSPSMAFGVQHPTSVNIT
LRLGKAYEISYVRLKFHTSRPESFAIYKRSRAGGPWEPYQYYSASCLRTYGRPEGHHLLP
GQDERLAFCTSEFSDISPLSGGNVAFSTLEGRPSAYNFEQSPGLQEWVTSTELLISLDRL
NTFGDDIFKDPKVLQSYYYAVSDFSVGGRCKCNGHASSCGPDEAGTLACRCQHNTTGTDC
ERCLPFFQDRPWARGTAEAANECLPCNCSGRSEECTFDRELFRSTGHGGRCHRCRDHTAG
PHCEHCEENFYHWDARQPCRPCDCHPAGSLHLQCDASGTCLCKPTVTGWKCDRCLPGFHS
LSEAGCRPCTCNAAGSLGTCDPHSGRCPCKGNVEGDLCDRCRPGTFNLQPHNPVGCSSCF
CYGHSKVCGTTAGFQELRVLSNFRQGPGGWRVRSKRGSERPPRWNPGGILLGPEDEEELA
APERFLGDQRFSYGQPLTLTFRVPRGGSVPSVQLRLEGAGLALALRHSSLSGPQDAGQPG
QAQLRFLLQETSEDTESPLPAFHFQRLLANLTTLSIRASGRGPSPSGQLLLREVWLTSAQ
PQRGRSPTASWVETCSCPQGYTGQFCESCAPGYKRETPQGGPYANCVPCTCNQHGTCDPN
TGICLCGHHTEGLFCEHCLPGFYGNAFAGHAEDCQPCPCPGQSPCTIIPENGEVVCTHCP
PHQRGRRCESCDDGFFGDPLGLSGAPQPCRQCQCSGNVDPNAVGNCDPLSGRCLRCLHGT
TGHHCERCREGFYGSALAPRPAGSCAPCSCNPGGLDSGQTPCDPVTGQCSCLPHVTGRDC
SRCSPGFYNLQPGRGCQSCKCHPLGAREYQCHPKTGQCPCRPGVTGQACDRCQQGFFGFS
IKGCWACRCSPVGSSSAQCHENSTCVCRPGFAGYKCDRCQENFFLTADGTRCQECPTCYA
LVKGEVAKLKARLTLMDGWLQGSNCGPWGPLDILQEEAPRGDIYQGHRLLRGAREAFLEQ
MTGLEGAVKAVREQLRRLSRSTRCTQAGTRKTCIQLADLGAALASSEEEILHAASVLVSL
VIVQEGPSQPTNWTHLATEARALSRSHRDAAAQIEAAARRALLASNRSYMQLWSLLDGRE
ALETQQELEDRYQEAQAAQKALGTAVAETLPEAERALAAAVNDAALRGAWLAVPGALVSS
VTLKALHGGPLKSQAGDLDLKVQDLGKTVASGERVATEAIGALQARARAVLQKTEPLTQL
RQEATAALARASSSVQAATVTVAGAKTLLADLEGMKVQFPRPQDQAALQRKAGVVRDRLL
ADTERKTKQAERMLGNAAPLSSSSRKKSREAELSAKDNAELARTLLREGKQGYRHANRLA
SQTQATLHQASQLALASGARSQELKEAKLVGAGLSTVERQIQESRVSLEKDIKALSELLA
RLGSLDAHQAPAQSLNETQWALEGLRLQLDSRGALQQKLRLLEQESEQQELQIQGFENDL
AEIRADKQNLEAILHSLPEHCASWQ
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgctcctgctgggcctggcgctggcggcgccgcgggcgggcgcgggc
atgggcgcgtgttacgacggcgcggggcgcccgcagcgctgcctgcccgagttcgagaac
gcggccttcgggcggcgcgccgaggcctcgcacacgtgcggcagcccgcccgaggacttc
tgcccgcacctgggcgcgccgcgcgccgggccgcagtgccagcgctgcgacgccgccgac
ccccggctgcaccacaacgcctcctacctcaccgacttccacagccaggacgagagcacc
tggtggcagagcccgtccatggccttcggcgtgcagcaccccacctccgtcaacatcacc
ctgcggctggggaaggcttacgagatcagctacgtgaggctcaagttccacaccagccgg
cccgagagcttcgccatctacaagcgcagccgagctgggggcccctgggagccctaccag
tactacagcgcctcctgcctgaggacctacggccggcccgagggccaccacctgctgccg
ggccaggacgagcgcctggccttctgcacctcggagttcagcgacatctccccgctgagc
gggggcaacgtggccttctccaccctggagggccggcccagcgcctacaactttgagcag
agccccgggctgcaggagtgggtcaccagcactgagctgctcatctctctggaccgcctc
aacacgtttggggacgacatcttcaaggaccccaaggtgctgcagtcctactactacgcc
gtgtctgacttctccgtgggcggcaggtgcaagtgcaacgggcacgccagctcctgcggc
cccgacgaggcgggcacactggcctgcaggtgccagcacaacaccacaggcaccgactgc
gagcgctgcctgcccttcttccaggaccgcccctgggcccgcggcacggccgaggccgcc
aacgagtgtctgccctgcaactgcagcggccgctccgaggaatgcacgttcgaccgggag
cttttccgcagcacaggccacggcgggcgctgtcaccgctgccgtgaccacactgcgggg
ccacactgcgagcactgtgaggagaacttctaccactgggacgcgcggcagccctgccgg
ccctgcgactgccacccggcaggctccctgcacctccagtgcgacgcctccggcacctgc
ctctgcaagcccacggtgaccggctggaagtgcgaccgctgcctgcccggcttccactcc
ctcagcgaggctggctgcagaccctgcacctgcaatgctgctggcagcctgggcacttgt
gacccccacagtgggcgctgcccctgcaaagggaacgtggagggagacctgtgtgacaga
tgtcgcccggggacattcaacctgcagccccacaatccggtgggctgcagcagctgcttc
tgctacggccactccaaggtgtgtgggaccaccgctgggttccaggagctccgcgtcctc
tccaacttccgccagggccctggaggctggcgggtcaggagcaagagaggctcagagcgc
cccccacgatggaacccaggtgggatcctcttgggcccagaagatgaggaggagctcgca
gcaccagagcgcttcctgggagaccagcggttcagctatggacagcccctcacgctgacc
ttccgtgttccccgtggtggctctgtgccctcagtgcagctgaggctggaaggggcgggc
ttggccctggctctgaggcactccagtctgtcgggtccccaggacgctgggcagccaggg
caggcacagctcaggttccttttgcaagagacctccgaggacactgagtccccgctgcct
gccttccatttccagcgtctcctcgccaatctgaccactctgagtatccgggccagtgga
cgaggcccaagcccttccggccagctgctcctgagagaggtctggctcacatcggcccag
ccccagcggggacgctcccccacagcctcctgggtggagacctgctcatgtccccagggc
tacacaggccagttctgtgaatcctgcgctccaggatacaaaagggagacaccacagggg
ggtccctatgccaactgtgtcccgtgcacctgtaaccagcatggcacctgtgaccccaac
acagggatctgcctgtgtggccaccacactgagggcctgttctgtgagcactgcttgcct
ggtttctatggcaacgccttcgcaggccatgctgaggactgccagccctgtccctgccct
ggacaatcgccctgcaccatcatcccagagaacggggaggtggtgtgtacccactgtccc
ccacaccaaagagggcggcgctgcgagagctgtgacgatggcttcttcggggacccgctg
gggctctctggagccccccagccctgccgccagtgccagtgcagcgggaacgtggacccc
aacgccgtgggcaactgcgaccccctgtctggccgctgcctgcgctgcctgcacggcacc
acggggcaccactgcgagcgctgtcgggagggcttctacggcagcgccctggccccgcgg
cccgccggcagctgcgcaccctgcagctgcaaccctgggggcctggacagtgggcagaca
ccctgcgacccagtgactggccagtgctcctgcctgcctcacgtgactgggagggactgc
agccgctgcagcccgggcttctacaacctgcagccggggaggggctgccagagctgcaag
tgtcacccactgggggcccgggagtaccagtgccatcccaagaccgggcagtgtccctgc
cgccccggtgtcacggggcaggcgtgtgacagatgccagcagggtttctttggcttctcc
atcaagggctgctgggcctgcaggtgctccccggtgggctccagctcggcccagtgccac
gagaacagcacgtgcgtgtgcaggcccggcttcgcgggctacaagtgcgaccgctgccag
gagaacttcttcctcacggcggacggcacgcgctgccaggagtgcccgacctgctacgcc
ctggtgaagggggaggtggccaagctgaaggccaggctgaccttgatggacggatggctg
caaggctccaactgtggcccctgggggccgctagacattctgcaggaagaagccccacgt
ggcgacatctaccagggccaccgcctgctgcgaggggcccgggaagccttcctggagcag
atgacaggccttgagggtgctgtgaaggccgtgcgggagcagctgcggaggctgagcagg
agtacacgctgcacccaggccggaacccggaagacctgcatccagctggctgacctgggc
gcagcactggcgtcctcagaagaggagattctgcacgcagcctctgtcctcgtgtctctg
gtgattgtgcaggaagggcccagccagcccaccaactggacccatctggccacagaggcc
cgtgccctctccaggagccacagggacgctgctgcccagatcgaagctgctgctcggcgt
gccctgctggcctctaacagaagctacatgcagctctggagtctgctggatggcagagag
gccctggagacccagcaggaactggaggacaggtaccaggaggcccaggcagcccagaaa
gcgctgggcacggctgtggcagagacgctgcctgaagctgagagagctcttgctgccgcc
gttaacgatgcagccctgcgcggggcctggttggctgtgcctggagcgctggtcagctcg
gtcaccctcaaagctctgcatggcgggcctctgaagtcccaggctggggacctggacttg
aaagtgcaagacctggggaagacagttgcatcaggagaacgtgtggccaccgaggctatt
ggagcccttcaggccagggcccgggcagtgctgcagaagacggagcccctcacccagctg
cgccaggaggccacagctgccctggcccgggcttcctcgtctgtccaggctgccacagtg
accgtcgcgggagccaagaccctgctggctgacctggaagggatgaaggtgcagtttcct
cggccccaggaccaggccgccctgcagaggaaagcgggtgtcgtccgggacaggctcctt
gcagacacggaaaggaagaccaagcaggcagagaggatgctgggcaatgctgctcccctt
tcctccagctccaggaagaagagcagagaggcagagctgtcggccaaggacaacgccgag
ctcgccaggaccttgctgagggagggaaagcagggctaccgccatgccaaccgacttgcc
agccagacgcaggccaccctccatcaggcctcccaactggcgctggcctcaggagcgcgc
agtcaggagctgaaggaagcgaaactggtgggtgccgggctgagcacggtggagcggcag
atccaggagtcacgtgtctccctggagaaggacatcaaggccttgtcggagctacttgcc
aggctggggtcactggatgcccatcaggccccagcccagtccctgaatgagacccagtgg
gcactggaaggcctgcggttgcagctggactcacggggggccctgcagcagaaactgagg
ctgctggagcaagagtcggagcagcaggagctgcagatccagggcttcgagaatgacctc
gctgagatccgtgcagacaagcagaacttggaggccattctgcacagcctgcccgagcac
tgtgccagttggcaatga
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