Sciurus carolinensis (gray squirrel): 124964964
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Entry
124964964 CDS
T08117
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
124964964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124964964
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncar03310
]
124964964
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124964964
Nuclear receptors [BR:
ncar03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124964964
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124964964
NCBI-ProteinID:
XP_047381716
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Position
14:75314367..75501992
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AA seq
459 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSISNGLSNLSNETSGTYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcctccgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattcttcaggaggagccagcagaac
aatgcctcttattcctgcccaaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgctgtg
aaatttgggaggatgtccaagaagcagagggacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagtggggaggcggaagccctggccagg
gtgtatagcagcagcatcagcaacggcctgagcaacctgagcaatgagaccagcggcact
tacgccaatgggcatgtcatcgacctgcccaagtctgaaggttactacagcgtagattct
ggtcagccatcccccgatcaatcaggacttgacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctatagctctttcaacaac
gggcagttagcaccagggataacaatgacagaaatcgatcgaattgcacagaacatcatt
aagtcccacctggagacatgtcagtacaccatggaagagctgcaccagctggcttggcag
acccacacctatgaagaaattaaagcctatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagatcactcacgccatccagtatgtggtggagtttgcaaaacggata
acaggcttcatggagctctgtcagaatgatcagatactgcttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaagccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgaccgaagaggagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaaacttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaaattaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaagctgcaggtatttaagcaatctcatcctgacatagtgaataca
ctgtttcctccattatacaaggagctctttaaccctgactgtgccaccgtctgcaaatga
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