Sciurus carolinensis (gray squirrel): 124964981
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Entry
124964981 CDS
T08117
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124964981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ncar04091
]
124964981
Lectins [BR:
ncar04091
]
C-Type lectins
Lecticans
124964981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
124964981
NCBI-ProteinID:
XP_047381734
LinkDB
All DBs
Position
14:55577467..55733592
Genome browser
AA seq
2188 aa
AA seq
DB search
MAGSKLAPVSMSSLGWGGPSALLLLLLLHRASPTFISLNQGMRVTKGSSAFLSGDDLKFA
IPKEKDACKVEVVMNEPITQRVGKLTPQVFDCHFLPNEVRYVHNGCPILDEDTVKLQLYR
FTETDTFTETFILRVYLLEPDCNIIRMSSNVLEVSEFYGLSRAIDKNLLRFDYERIPGLA
CTVRLDPLRTQLPAHGQMVVVEPRPEGPRGDQPHSFFPESQLGMELKCPGGSCTLELKKI
ASLKVSCEEFLLMGLRYQHMHPPSPNIDYISIQLDLTDSRSKIVYKSESAWLPVYIRAGI
PNQIPRAAFMAMFILEVDQFILTSLTTSVLDCEEDETPKHLLVFNITKAPLQGYMTHLLD
HTRPVSSFTWKDLSDMQIAYQPPNSSHPERRNYEVELEVYDFFFGRSAPVTVHISIRTAD
TNAPRVSWNTGLNLLEGQSRAITWEQFQIVDNDDIGAVQLVITDGLHHGRLTVRGGKGFL
FTVADLQTGVVRYHHDDSDSTKDFVVFRIFDGHHSIRHKFPINILPKDDSPPFLITNVVI
ELEEGQTILVQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVSGFLQRD
LFNGIIYYRHFGGEIFEDSFEFILWDSHEPPNLSVPQMVTIHITPVDDQLPKEAPGVSRH
LVVKETEVAYITKKHLHFLDTESYDRELLYTITTPPCFSFSDRHLDAGKLFMVDSIPKLT
KNPTALGLRSFTQHAVNYMKVAYMPPMQDIGPHLRHVQFTFSISNQHGGTLHGICFNITV
LPVDNQVPEVSTNPLRVAEGGQCVISTEHILVSDVDTKLDNIYLSLQRLPLHGRLELNGF
PLDAGGTFSWGDLHTLKVRYQHDGSEVLQDDICLEVTDGTNSAEFVLHVEVFPINDEPPV
LKADLIPMMHCSEGGEVVITPEHIFATDVDSDDLKLMVMIARGPQHGVVWKAGVQVDQFS
QEDVISGVVTYKHTGGEIGLVPCFDTITLVISDGEAGPFVNGCCYSGPNPSVPLHESFPV
YHLNITVHPVDNQPPSVAIGTMFFVDEGFSAALTINHLSTTDPDTPADDLEFVLVSPPQF
GYLENTLPAVGFEKSNMGVSIASFHWKNMKALHINYVQSRHLRMEPTTDQFVVYVTDGKR
RSLETPFYVIINPTNDEVPDFVVQNITVCEGQMIELDSSVINAADLDIPEDPLLFSITQK
PRHGLLINRVLSKDSPQNKQPANPDQKQELVHSFSMELFKTGMRLTYVHDGSESFDDDFT
IQLSDGKHKIFKTISVEITPVNDERPMLSKKAEIEMNMGDTRIISSAVLSAIDKDSPREK
IYYLFERLPQHGQLQLKIGRDWVALSPGMKCTQEEVDLNLLRYTHTGAVDSQNRDSFTFY
LWDGDNRSPAFDCHIIIKDMGKGDIVLLAKPLVVSKGNRGFLTTTSLLAVDGTDRPEELL
YAITSPPRYGQVEYVRYPGVPITSFSQMDIAGQMVCYIHKSRAAVPSDSFRFIVSNGLWT
KHGVFEITLETVDRALPVVTRNKGLRLAEGAMGLLSPDLLQLTDPDTPAENLTFLLVQLP
QHGQLYLRGTVLLQHNFTQWDVDSRNVTYQHSGGNSQIDRFTFMATDRTNQGFVVDGRVW
EEPVPFTIQVERLDKTAPRITLLRSPSQVGLLKNGCYGIYITSRVLMASDPDTEDHQIIF
KILRGPLHGHLENTTTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDIVEFQIMDPTGNS
ATPQILELKWSHIEWSQTEYEVCESVGMLPLEVTRRGYAMDSAFVGVKVNQVSAAIGKDF
TVTPSKLIQFDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKAAVKILDS
KGGQCRPSYSKQSKPNTGEKDIWHPLHPGSSSPTTSGSLHLERRPPPSSKQLATTRGDSL
QGFDSAAFSQRKLRTRLNGKAVRPSSVYRNRTDIIYNYHGIVSLTLEDDGAPPHRRKAKV
SIISQPQKTDKVTELSGADKVESTIESHFPRQDQLPLFPKNCTMELKGLFHFEESIQKLY
QCNGIAWKAWSPQIKEVEDKSCPVGWHLHSGYCHTWIPEQKGTWTMAIRTCREQHLGNLV
TIFSRQHMQWLWDISGRKPFWIGLNDRAHAGHWEWIGGEPVTFTNWRRELPQHSKPGRNC
VLVQRGGKWQTKNCMKGKPQNFMCSRKL
NT seq
6567 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagcaagttggcccctgtcagcatgagctctctgggttggggtggccccagc
gccctgctgcttctgctgctcctgcaccgggccagccccaccttcatcagcctgaaccaa
gggatgagggtgacaaagggcagctccgccttcctgtcaggagatgacctgaagtttgcc
atccccaaagagaaagatgcctgcaaagtggaagtcgtgatgaatgagccgataacccag
agggtcgggaaactcacgccacaggtctttgactgccatttccttcccaatgaagtcagg
tatgtccacaacggttgtccaattcttgatgaagacaccgtgaagcttcagctttacaga
ttcactgagacggacaccttcactgagacctttatcctgcgggtctatcttctggaacca
gactgtaatatcatccgcatgagcagcaatgtgctggaggtgtctgaattctatggcctg
tcccgagcaattgataagaacctgctcagatttgactacgagaggatcccaggcctggcg
tgcactgtcaggctggaccctttgagaactcagctgccagcccacggccagatggttgtg
gtggaacctcggccagaaggaccacgtggagatcagccacacagtttttttcctgagtct
caactgggaatggaactgaaatgtccaggtggaagctgtaccctggaattgaagaaaata
gcaagtctcaaagtgagctgcgaggagttcctgctgatggggcttcgttatcagcatatg
catcccccttctcccaacattgattatatctccatccaactggacctcacggacagcagg
agtaaaatcgtatacaagtcagagagtgcgtggttacccgtctacatcagagctggcatt
ccgaatcagattccaagggcagcattcatggccatgtttattttggaagtggatcagttc
atcctgacctctttaactacatcagttctggactgtgaagaggatgagacccccaaacac
ttgctggtgtttaacattactaaagccccactccaaggctacatgactcacttgttggat
cataccagaccagtctcctcattcacctggaaggacctcagcgacatgcagattgcctat
cagccacctaacagcagccatcctgagaggagaaattacgaggtggaattggaggtatat
gacttcttctttggaaggagtgcacctgtcacagtccatatctccatcagaacagcagac
accaacgccccccgagtgtcctggaatacaggtctgaatctcctggaggggcagtctcgg
gctatcacttgggaacagtttcagattgttgacaatgatgacattggtgctgtccagttg
gtcatcactgatggcctgcatcatggacggctcacagtgagagggggcaaaggatttctg
ttcaccgtggctgacctgcagactggagttgttcgctatcatcatgacgacagcgactcc
actaaagactttgtggtcttcaggatatttgatggccatcacagcatccgtcacaagttt
cctatcaacatcttgcccaaagatgacagtcctccctttctcataaccaatgtcgtgatt
gaactggaggaaggacagaccatcctggtgcagggttccatgctgagagcctcagacatg
gactccagcgatgactacatcttctttaatatcacaaaacccccacaggctggagagatc
atgaagaagccagggccagggttgataggctatcctgtttctggcttccttcagagggat
ctgtttaatggtatcatttactatcgtcattttggtggagaaatctttgaagattctttt
gaatttatcctgtgggacagccacgaacctccaaatctctcagtgccgcagatggtgacc
atccatatcactccagtggatgaccagcttccaaaagaggctcctggggtttctcggcat
ctggttgtcaaggaaacagaggtggcctacataacgaagaagcatctccatttcctagat
acagaatcttatgatagggagctgctctacaccataaccactcctccatgtttctctttt
agtgacagacatttggatgctgggaaattattcatggtggacagcataccaaagctaacc
aaaaatcctacagccctggggctaaggtcatttactcagcatgctgtgaactatatgaaa
gtagcctacatgccacccatgcaagatataggaccccatctccgacacgtccagttcacc
ttttccatcagtaaccagcatggtggcactttgcatgggatctgctttaacattacagtt
ctcccagtggacaatcaagttcctgaggtatccaccaaccctctgagagtggctgaggga
ggccagtgtgtcatcagcacagagcacattctggtttctgatgtggacaccaagttggac
aatatctacctttccctgcagaggctgcctctgcatggaaggctggagttgaatggattc
cctctagatgctgggggcacattttcttggggagacctccataccttaaaagttaggtat
caacatgatggatctgaggttcttcaggatgacatatgcttggaggtcacagatggcaca
aattcagcagaatttgttttgcatgttgaggtttttcctataaatgatgagccaccagtc
ctgaaggctgacctcatccccatgatgcattgctcagaaggtggggaggtggtcatcacc
cctgaacacatttttgctactgacgtggacagcgatgacttgaaactgatggttatgatt
gctcgaggtcctcagcatggggtggtgtggaaggctggcgttcaagtagaccagttctct
caggaagacgttatctcaggggttgtgacatataaacacacaggtggtgagattggcttg
gtgccttgtttcgacaccattactttggtgatttcggatggagaagctggcccttttgtg
aatggctgttgctacagcggacctaatccatctgttcctcttcatgagtcctttccagtg
tatcatctcaacatcacagtgcatccagtagacaatcagccaccttcagttgcaataggt
accatgttctttgtagacgaggggttctcagcagcccttaccattaaccatttgtctacc
actgaccctgacacgcctgcagatgacttggaatttgttttggtttctcctccccaattt
ggttaccttgaaaacacacttcctgctgtgggttttgagaaaagcaatatgggtgtaagt
atagcttcctttcattggaaaaatatgaaggctttgcacatcaactatgtgcagtctagg
cacctgaggatggaaccgactactgaccagtttgtggtgtacgtcacagatgggaagcga
cgctccttggagactccattttatgttataatcaaccccacaaatgatgaagttcctgat
tttgtagtgcagaatattactgtgtgtgagggtcagatgatagagctggattcttctgtc
atcaatgctgccgacctggacatccctgaggaccccttgctgttcagtatcactcagaaa
ccacgtcatggtctcctcatcaacagggtgcttagcaaagactctcctcagaataagcag
ccagccaaccctgaccagaagcaggaacttgttcacagcttttccatggaactcttcaag
actggaatgaggttgacctatgtacatgatggctccgagagctttgacgatgactttaca
atccagttgtcggatgggaaacacaagatatttaaaaccatttcggtagagatcaccccg
gttaacgatgagagaccaatgctaagcaagaaggctgaaattgaaatgaacatgggggat
actcgtattatttctagcgctgttctttctgccatagacaaagactcacccagggagaag
atttactatctgtttgaaaggcttcctcaacatggacaacttcagcttaagatagggaga
gactgggtggctctctccccgggcatgaaatgcacccaggaggaagtggatttgaacttg
ctgagatacacacacaccggggcagtggactcccagaatcgagatagctttaccttctac
ctctgggatggtgacaaccgatcacctgcatttgactgtcacatcatcatcaaggacatg
ggaaaaggtgatattgtccttcttgcaaaaccacttgtggtatctaaaggcaacagaggg
ttcttgacgactaccagtcttctagctgtggacggaacagacaggcctgaggaactgctg
tatgccatcacctcgccaccgcggtatggccaggtggaatatgtccgctatcccggagtc
cccattacaagcttcagccaaatggacatagcagggcagatggtctgctacatacataag
agcagggcagctgtgcccagtgacagcttcagattcatcgtcagcaatggactgtggacc
aagcacggagtgtttgagatcacactggaaactgtagacagagccttgcctgtggtgacc
aggaacaaggggctgaggctggctgagggggccatgggcctgctttctcctgacctcctc
cagctgactgaccctgacactcccgcagagaacctcaccttcctcctggtccagctccca
cagcatggccagctctacctgcggggaacagtactgcttcaacacaatttcacacagtgg
gacgtggacagcaggaatgtgacctatcagcactctggaggcaactcccagattgaccgc
tttactttcatggccacagataggacaaaccaaggctttgttgtggatgggagagtgtgg
gaagagcctgttccattcaccattcaggtggagcggttggataaaacagccccccggatc
acactcttgcgttcaccttctcaagtgggactcctgaaaaatggctgttacgggatttac
atcacttcccgagtgctgatggcatcggaccctgacactgaggaccatcagattatcttt
aagattttacgaggcccactacacggacatttggagaatacgacaacaggtgaatttatc
catgagaaatttagccaaaaggacttaaacagtaagaccattctttacatcataaatcca
tctttggaagtaaattcagatatcgtggaatttcaaatcatggaccccacagggaactct
gccactcctcaaattttggagttgaagtggtctcatattgaatggtcacaaactgaatat
gaggtctgtgagagtgtgggcatgttgcccttagaagttaccagaaggggatatgctatg
gactcagcctttgtgggtgtaaaggtcaaccaagtgtcagctgcaattggaaaagatttc
acagtgactccatccaaactgattcagtttgacccaggaatgtcaactaagatgtggaat
atagcaattacctatgacggattagaggaagatgatgaggtctttgaagtaattctgaac
tcccctgtgaatgcagttcttggcacgaagacaaaagctgcagtgaaaattttggactca
aaaggaggacagtgccgtccttcatactccaagcaaagcaagcccaacacaggggagaag
gacatttggcacccgctgcacccagggtcttcctcacccaccacttctggttcccttcat
ctggaaagacgaccccctccatcttccaagcagttggcgaccaccaggggagactcccta
cagggctttgattctgcagctttttctcaaagaaagcttaggacccgcttgaacggcaaa
gcagttcgtccatcttctgtttacagaaacagaacagacatcatctataattatcatggg
atagtttccttgacattggaagatgatggtgccccacctcacagaaggaaggccaaagta
tccattattagtcaaccacaaaagacagacaaagtgactgagctttctggagcagataag
gtggaatccacaattgagtctcactttcccagacaggaccagttacccttattcccaaag
aactgcactatggaattaaaaggactcttccactttgaagaaagcatccaaaagctgtat
caatgcaatgggattgcctggaaagcctggagtccccaaatcaaggaggtggaagacaaa
tcttgcccagttggatggcaccttcactcaggctactgtcacacctggatcccagagcag
aaaggaacctggaccatggctattcgaacttgcagggaacaacacctgggaaatctcgta
actatattctccaggcagcacatgcagtggctctgggacatcagtggaagaaagcccttc
tggataggtttgaatgaccgagcgcatgctggccattgggaatggattggtggtgaacct
gtcaccttcaccaactggaggagagagctccctcaacactcaaagcctggaaggaactgt
gttttggttcaaagaggagggaaatggcaaacaaagaactgtatgaagggcaaacctcaa
aatttcatgtgctccaggaaactctaa
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