KEGG   Sciurus carolinensis (gray squirrel): 124964989
Entry
124964989         CDS       T08117                                 
Name
(RefSeq) nucleolar protein 6 isoform X1
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    124964989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncar03009]
    124964989
Ribosome biogenesis [BR:ncar03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    124964989
SSDB
Motif
Pfam: Nrap_D4 Nrap_D5 Nrap Nrap_D2 Nrap_D3 Nrap_D6 UT
Other DBs
NCBI-GeneID: 124964989
NCBI-ProteinID: XP_047381744
LinkDB
Position
14:38709955..38724803
AA seq 1145 aa
MGPAPTGEQLRGASGGPEVIPSLEGTGKKGKKASSRKRVVTGSQAENLLQPVKLSRAELY
KDPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLLEVNHRIKRVPS
TSESELTDQAWLPAGIQVPFHQVPYTVKGSFHFLPPAQVTVVGSYLLGTCIRPDINVDMA
LIMPREILQDKDLLNQRYFRKRALYLAHLAHHLARDPLFGSVRFSYINGCHMKPSLLLRP
HGKDEHLVTVRLHPCPPSDFFRPCRLLPTKNNVRSSWYRGQNPQEDGKLEPPTPHYNTWI
LQDTALGSHVQLLSNVLGSALGLKDGVALLKVWLRQRELDKGLGGFSGFLVSMLVAFLVS
TRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFQQAFPVVFLDPSG
RLNLCADVTASTYHQVQHEARLSMALLDSKTDDGFQLLLMTPKPMIRAFDHVLHLRPLSR
LQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGSRLQLLAHSRPPVPEWDISQDP
PKHKDSGTLTLGLLLQPEGLNSVLELGPEADQPEAADFRQFWGSRSELRRFQDGAIREAV
VWEAASLSQKRLIPHKVVTHLLALHADIPDNCVHYVGGFLDALIQGLKETSSTGEEALAV
AVRCYDDLSRMLWGLEGLPLTVSAVQGAHPVLRYTEVFPPSPVQPACSFYEQLREQASLL
PRLDKPCPAYVEPMTMVCHLEGSGQWPQEAEAIRRVRAAFQLRLAELLTQQHGLQCRATA
THTDVLKDGFVFRIRVAYQREPQILREVRSPQGMISLRDTPASLCLERETRHLPLLTSAL
HGLHQQHAAFSGVARLAKRWVRAQLLGEGFTDESLDLVAAALFLHPEPFTPPSSPQVGFL
RFLSLVSTFDWKNNPLIVNLNNELTVEEQVEIRSSFLAARTRLPVMVIITPQDCKNSVWT
QDGPSAQILQQLVILAAKALPVLEKQLMDPWGPGDIRTVFRPPLDIYDVLIHLSPRHIPR
HRQAVDSPAASFCRGLLNKLGTSSLMPVLGYDPPQLYLAQLREVFGDLALFFYDQHGGEV
IGVLWKPTSFQPQPFKASSTKGHMVVSQGGELVMLPNIEAILEDFAVMGEGLVQAVEVRS
ERWTV
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggggccagcccctacaggagagcagctccgcggagcgtctgggggcccggaggtgata
ccatccttggaaggcacaggcaagaaagggaagaaggcatcctcaagaaagcgtgtagtg
actgggtcccaagcagagaaccttctgcagccagtgaagctcagcagggcagaattgtac
aaggaccctaccaacgaggagctgaatcgccttcgggagactgagatcctgttccactcc
agtttgcttcgtttacaggtagaggagctactaaaggaagtgaggttgtcagaaaagaag
aaagatcgaattgatgccttcctgttggaggtcaaccatcggatcaagagggtgccctca
acttctgagtcagaactcactgaccaggcatggctccctgctggaattcaagttcccttc
catcaagtgccctatactgtgaagggctctttccacttcctgcctccagcccaggtcact
gttgtgggcagctaccttctgggcacctgcattcgaccagacattaatgtggatatggca
ctgatcatgcccagggaaatcctacaggataaggacctgttgaaccagcgctatttccgg
aagcgtgctctttacctggcccacttggctcaccacctggcccgagaccccctctttggc
agcgttcgcttctcctacatcaatggctgccacatgaaaccctcactgctgctgcggcca
catgggaaggatgagcacttggtcactgtacgtctgcatccatgccctccatctgatttc
ttccgcccatgccgcttgctgccaacgaagaacaatgtgcgttcttcctggtaccgaggg
cagaatcctcaagaggatggtaaactagagccccctactccccactacaacacgtggatt
ctgcaggatacagctctaggatcccatgtgcagctgctatcaaatgtgctaggctctgcc
ctaggactgaaagatggtgtggctcttctgaaggtctggctgaggcagagggagctggac
aagggcctgggtgggtttagtggattcctggtctccatgttggttgccttcctcgtgtcc
acacgtaagatccacactaccatgagcggctaccaagtcctaagaagtgtcttgcagttt
ctggctaccacagatctgacagtcaatgggatcagtttatgtctcagctcagatccctcc
ttgccagccctggctgacttccagcaggcctttcctgttgtcttcttggacccctcaggc
cgtctcaacctctgtgctgatgtaactgcctccacttaccaccaggtgcagcatgaggca
cggctgtctatggcattgctggacagcaaaactgatgatggattccagctgctgttgatg
acccccaaacccatgatccgggcttttgaccacgtcctgcatctccgtccactgagtcgc
ctgcaggctgcgtgtcaccggctgaagctctggccagagctgcaggacaatggtggtgat
tatgtctctgctgctttgggtccactaactaccctcctggagcagggtctggggtcccgg
ctgcagctgctggcccactctaggcccccagtcccagagtgggacatcagtcaagatcca
ccaaagcacaaagactctgggaccctgaccctgggattgctcctccagcctgagggactg
aacagtgtccttgaactgggtccagaggctgaccagcctgaggctgctgacttccgccag
ttctggggatcccgttcagagcttcggcgtttccaggatggagccattcgggaagctgtg
gtctgggaggcagcctctctgtcccaaaagcgccttatcccccacaaagtggtcacccac
cttttggcactccatgctgacatcccagataactgtgtccactatgtggggggcttcctg
gatgcactgatccaaggcctgaaagagacctctagcacaggtgaggaggccctggcagtg
gcagtacgttgctacgacgacctcagccgcatgctgtgggggttggaaggtctcccactg
actgtgtctgctgttcagggagctcacccagtattgcgctacacagaggtattcccacca
agcccagtacaaccagcctgctccttctatgagcaactccgggaacaggcatctctgttg
ccccggctggataaaccctgcccagcgtatgtggagcccatgaccatggtttgtcacctg
gaaggcagtggtcagtggccacaggaagccgaggccatacgccgggtccgagctgccttc
cagctgcgcctggcagagctgctgacacagcagcatgggctgcagtgccgtgccactgcc
acacatactgatgtccttaaggatggatttgtgttccgaattcgtgtggcctatcagcgg
gaacctcagatcctgagggaggtgcggagccctcaggggatgatctcgctgagggacaca
cctgcctctctctgtcttgagagagagacaaggcacttgcccctgctcaccagtgccctg
catggactccaccagcagcacgctgctttctctggtgtggctcgactggctaagcggtgg
gtacgagcccagcttctaggtgaggggttcactgatgagagcctggatctggtggctgct
gcccttttcctgcaccctgagccttttacccctcctagctccccgcaggttggattcctt
cgattcctttccctggtatcaacctttgattggaagaacaaccccctcattgtcaatctc
aacaatgaacttactgtggaggagcaggtggagattcgtagtagcttcttggcagctcgg
acacgacttcctgttatggtcattattactccccaggactgcaaaaactctgtgtggaca
caagatggaccctctgcccagatccttcagcagcttgtgatcctagcagccaaggctctg
cctgtcctagagaagcagcttatggatccttgggggcctggggacatcaggacagtgttc
cgaccacccttggacatatatgatgtgctgatccacctgtctccacgccatattccccgg
caccgccaggctgtggactctccagctgcctccttctgtcgtggccttcttaataagcta
gggacctcgtccctgatgcctgtgttgggctatgatcctcctcaactctatctagcacag
ctcagggaggtgtttggggatctggcccttttcttctatgaccagcatggtggagaggtg
attggtgtcctctggaagcccacaagcttccagccccagccgttcaaggcttccagcaca
aagggacacatggttgtgtctcaaggtggcgagttagtgatgctgcccaacatagaagcg
atcctagaggactttgctgtgatgggagaaggcctggtgcaggctgtggaggtccgaagt
gagaggtggactgtgtga

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