Sciurus carolinensis (gray squirrel): 124964989
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Entry
124964989 CDS
T08117
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124964989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncar03009
]
124964989
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124964989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap
Nrap_D2
Nrap_D3
Nrap_D6
UT
Motif
Other DBs
NCBI-GeneID:
124964989
NCBI-ProteinID:
XP_047381744
LinkDB
All DBs
Position
14:38709955..38724803
Genome browser
AA seq
1145 aa
AA seq
DB search
MGPAPTGEQLRGASGGPEVIPSLEGTGKKGKKASSRKRVVTGSQAENLLQPVKLSRAELY
KDPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLLEVNHRIKRVPS
TSESELTDQAWLPAGIQVPFHQVPYTVKGSFHFLPPAQVTVVGSYLLGTCIRPDINVDMA
LIMPREILQDKDLLNQRYFRKRALYLAHLAHHLARDPLFGSVRFSYINGCHMKPSLLLRP
HGKDEHLVTVRLHPCPPSDFFRPCRLLPTKNNVRSSWYRGQNPQEDGKLEPPTPHYNTWI
LQDTALGSHVQLLSNVLGSALGLKDGVALLKVWLRQRELDKGLGGFSGFLVSMLVAFLVS
TRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFQQAFPVVFLDPSG
RLNLCADVTASTYHQVQHEARLSMALLDSKTDDGFQLLLMTPKPMIRAFDHVLHLRPLSR
LQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGSRLQLLAHSRPPVPEWDISQDP
PKHKDSGTLTLGLLLQPEGLNSVLELGPEADQPEAADFRQFWGSRSELRRFQDGAIREAV
VWEAASLSQKRLIPHKVVTHLLALHADIPDNCVHYVGGFLDALIQGLKETSSTGEEALAV
AVRCYDDLSRMLWGLEGLPLTVSAVQGAHPVLRYTEVFPPSPVQPACSFYEQLREQASLL
PRLDKPCPAYVEPMTMVCHLEGSGQWPQEAEAIRRVRAAFQLRLAELLTQQHGLQCRATA
THTDVLKDGFVFRIRVAYQREPQILREVRSPQGMISLRDTPASLCLERETRHLPLLTSAL
HGLHQQHAAFSGVARLAKRWVRAQLLGEGFTDESLDLVAAALFLHPEPFTPPSSPQVGFL
RFLSLVSTFDWKNNPLIVNLNNELTVEEQVEIRSSFLAARTRLPVMVIITPQDCKNSVWT
QDGPSAQILQQLVILAAKALPVLEKQLMDPWGPGDIRTVFRPPLDIYDVLIHLSPRHIPR
HRQAVDSPAASFCRGLLNKLGTSSLMPVLGYDPPQLYLAQLREVFGDLALFFYDQHGGEV
IGVLWKPTSFQPQPFKASSTKGHMVVSQGGELVMLPNIEAILEDFAVMGEGLVQAVEVRS
ERWTV
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggggccagcccctacaggagagcagctccgcggagcgtctgggggcccggaggtgata
ccatccttggaaggcacaggcaagaaagggaagaaggcatcctcaagaaagcgtgtagtg
actgggtcccaagcagagaaccttctgcagccagtgaagctcagcagggcagaattgtac
aaggaccctaccaacgaggagctgaatcgccttcgggagactgagatcctgttccactcc
agtttgcttcgtttacaggtagaggagctactaaaggaagtgaggttgtcagaaaagaag
aaagatcgaattgatgccttcctgttggaggtcaaccatcggatcaagagggtgccctca
acttctgagtcagaactcactgaccaggcatggctccctgctggaattcaagttcccttc
catcaagtgccctatactgtgaagggctctttccacttcctgcctccagcccaggtcact
gttgtgggcagctaccttctgggcacctgcattcgaccagacattaatgtggatatggca
ctgatcatgcccagggaaatcctacaggataaggacctgttgaaccagcgctatttccgg
aagcgtgctctttacctggcccacttggctcaccacctggcccgagaccccctctttggc
agcgttcgcttctcctacatcaatggctgccacatgaaaccctcactgctgctgcggcca
catgggaaggatgagcacttggtcactgtacgtctgcatccatgccctccatctgatttc
ttccgcccatgccgcttgctgccaacgaagaacaatgtgcgttcttcctggtaccgaggg
cagaatcctcaagaggatggtaaactagagccccctactccccactacaacacgtggatt
ctgcaggatacagctctaggatcccatgtgcagctgctatcaaatgtgctaggctctgcc
ctaggactgaaagatggtgtggctcttctgaaggtctggctgaggcagagggagctggac
aagggcctgggtgggtttagtggattcctggtctccatgttggttgccttcctcgtgtcc
acacgtaagatccacactaccatgagcggctaccaagtcctaagaagtgtcttgcagttt
ctggctaccacagatctgacagtcaatgggatcagtttatgtctcagctcagatccctcc
ttgccagccctggctgacttccagcaggcctttcctgttgtcttcttggacccctcaggc
cgtctcaacctctgtgctgatgtaactgcctccacttaccaccaggtgcagcatgaggca
cggctgtctatggcattgctggacagcaaaactgatgatggattccagctgctgttgatg
acccccaaacccatgatccgggcttttgaccacgtcctgcatctccgtccactgagtcgc
ctgcaggctgcgtgtcaccggctgaagctctggccagagctgcaggacaatggtggtgat
tatgtctctgctgctttgggtccactaactaccctcctggagcagggtctggggtcccgg
ctgcagctgctggcccactctaggcccccagtcccagagtgggacatcagtcaagatcca
ccaaagcacaaagactctgggaccctgaccctgggattgctcctccagcctgagggactg
aacagtgtccttgaactgggtccagaggctgaccagcctgaggctgctgacttccgccag
ttctggggatcccgttcagagcttcggcgtttccaggatggagccattcgggaagctgtg
gtctgggaggcagcctctctgtcccaaaagcgccttatcccccacaaagtggtcacccac
cttttggcactccatgctgacatcccagataactgtgtccactatgtggggggcttcctg
gatgcactgatccaaggcctgaaagagacctctagcacaggtgaggaggccctggcagtg
gcagtacgttgctacgacgacctcagccgcatgctgtgggggttggaaggtctcccactg
actgtgtctgctgttcagggagctcacccagtattgcgctacacagaggtattcccacca
agcccagtacaaccagcctgctccttctatgagcaactccgggaacaggcatctctgttg
ccccggctggataaaccctgcccagcgtatgtggagcccatgaccatggtttgtcacctg
gaaggcagtggtcagtggccacaggaagccgaggccatacgccgggtccgagctgccttc
cagctgcgcctggcagagctgctgacacagcagcatgggctgcagtgccgtgccactgcc
acacatactgatgtccttaaggatggatttgtgttccgaattcgtgtggcctatcagcgg
gaacctcagatcctgagggaggtgcggagccctcaggggatgatctcgctgagggacaca
cctgcctctctctgtcttgagagagagacaaggcacttgcccctgctcaccagtgccctg
catggactccaccagcagcacgctgctttctctggtgtggctcgactggctaagcggtgg
gtacgagcccagcttctaggtgaggggttcactgatgagagcctggatctggtggctgct
gcccttttcctgcaccctgagccttttacccctcctagctccccgcaggttggattcctt
cgattcctttccctggtatcaacctttgattggaagaacaaccccctcattgtcaatctc
aacaatgaacttactgtggaggagcaggtggagattcgtagtagcttcttggcagctcgg
acacgacttcctgttatggtcattattactccccaggactgcaaaaactctgtgtggaca
caagatggaccctctgcccagatccttcagcagcttgtgatcctagcagccaaggctctg
cctgtcctagagaagcagcttatggatccttgggggcctggggacatcaggacagtgttc
cgaccacccttggacatatatgatgtgctgatccacctgtctccacgccatattccccgg
caccgccaggctgtggactctccagctgcctccttctgtcgtggccttcttaataagcta
gggacctcgtccctgatgcctgtgttgggctatgatcctcctcaactctatctagcacag
ctcagggaggtgtttggggatctggcccttttcttctatgaccagcatggtggagaggtg
attggtgtcctctggaagcccacaagcttccagccccagccgttcaaggcttccagcaca
aagggacacatggttgtgtctcaaggtggcgagttagtgatgctgcccaacatagaagcg
atcctagaggactttgctgtgatgggagaaggcctggtgcaggctgtggaggtccgaagt
gagaggtggactgtgtga
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