Sciurus carolinensis (gray squirrel): 124965020
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Entry
124965020 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: rab GTPase-activating protein 1-like
KO
K20284
Rab GTPase-activating protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124965020
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124965020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
124965020
NCBI-ProteinID:
XP_047381799
LinkDB
All DBs
Position
14:complement(11365874..11516921)
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AA seq
1069 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QKELADVLMDPPMDDQPGDKELVERSQLDGEGDGPLSNQLSASSTINPVPLVGLQKPEMS
LPVKPGQGDSEVSSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQI
SLDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATAAPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGVLLSPGKDVRNS
DMHLLDLESMGKSSDGKSYVITGSWNSKSPHFQAVNEETPKDKVLFMTTAVDLVITEVQE
PVRFLLETKVRVCSPNERLFWPFSKRSTTENFFLKLKQIKQKERKNNTDTLYEVVCLESE
SERERRKTTASPSVRLPQSGSQSSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGELLSKWHLNLSVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFSQLERLMQEYIPDLYNHFLDISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGAL
KFFRVQLPXRYRSEENAKKLMELACNMKIGQKKLKKYEKEYHNMREQQAQREDPIERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEE
EKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTTNKVEIE
KIRQKVDDCERCRELFNKEGRVKGISSTKEVLDEDTDEEKETLKNQLREMELELAQTKLQ
LVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIKTATGVQGKETC
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcagtgtctactctt
aatagtgaagattttgtcttggtttccaggcaaggagatgagacaccatctacaaataat
ggaagtgatgacgagaaaacgggactcaagattgtagggaatggaagtgagcaacagctg
cagaaagagctagcagatgtgctgatggatcctcccatggatgaccaaccaggggacaag
gagcttgtggaaaggtcacaactagatggtgaaggagatggacctctttctaatcagctc
tcagcttcatccaccattaaccccgtgccattagtagggctccagaaaccagagatgagc
ctgccagtgaaacctggacaaggagattctgaagtgtcaagtccttttacaccagtggct
gatgaggacagtgtagttttcagtaaactaacttatttaggctgtgcctcagtaaatgct
cccaggagtgaagtagaagccttgaggatgatgtccatcttaagaagccagtgtcagatt
tcactagatgtaaccctctcagtgcctaatgtatctgaaggaactgtgagactcttagat
cctcagacaaacactgaaatagcaaactaccctatctacaaaatcctcttctgtgtcaga
gggcatgatggaactcctgagagtgactgttttgctttcaccgaaagtcattacaatgca
gagctcttcagaatacatgtctttcgatgtgaaatacaagaagctgtaagccggatactt
tacagttttgccactgccttccgccgttctgccaagcaaaccccactttcagccactgct
gcaccgcagactcctgacagtgatatctttaccttctctgtgtctttagaaataaaagaa
gatgatggcaaaggttattttagtgctgttcccaaagacaaggacagacaatgctttaaa
ctacgccaaggaattgataagaagattgtcatctatgtacaacaaacaactaataaagaa
cttgccattgaaagatgttttggagttctcctcagcccgggaaaagatgtacgaaacagt
gatatgcatttgttagatttggagtctatgggtaaaagttcagatggaaaatcatatgta
attactggtagctggaattcaaaatccccacattttcaagctgtaaatgaagaaactcct
aaagataaagtgctatttatgaccacagctgttgatttggtgataacagaagtgcaggaa
cctgttcgatttctcctagagacaaaagttcgagtttgctcacctaatgaaagattattc
tggcccttcagcaaacgtagtactactgaaaatttttttttgaaactaaagcagataaag
cagaaggagagaaaaaataatactgacactttatatgaagttgtgtgcttggaaagtgaa
tcagaaagagaaaggaggaaaactacagccagtccttcagttcgcttgccacagtctgga
tctcagagctcaatgatcccttctcctccagaagatgatgaagaggaagataacgatgaa
cctctcttgagtggatctggtgatgtatccaaagagtgtgcagaaaaaattcttgaaaca
tggggagaactgctgtcaaagtggcacctcaacttgagtgtaagaccaaagcagttgtca
tccttagtacgaaatggtgtccctgaggctcttcgaggagaagtctggcagttgctggca
ggctgtcacaacaatgaccacctggtagaaaaataccgaattcttatcacaaaggagtct
ccccaggacagtgctatcacccgggatattaatcggacatttccagctcatgactatttc
aaggatacaggaggagatggacaagattccttatataaaatatgcaaggcttattctgta
tatgatgaagagattggctattgtcagggccagtcatttcttgctgctgtgctgcttctc
catatgcctgaagaacaggcattcagtgttctggtcaagatcatgtttgactatggtctc
agggaacttttcaagcaaaactttgaagatttgcattgcaaattttcccagttggaacgc
ctcatgcaggaatacatccctgacctgtacaaccacttcctggatatcagccttgaagca
cacatgtatgcctcccagtggtttcttacacttttcactgcaaaattccctctctacatg
gtcttccatatcatcgacctgcttttatgtgagggcataagtgttatttttaatgtggcc
cttggattattaaagacttccaaggacgacctgctattgacagactttgaaggtgccttg
aagttcttcagagttcagcttcctnaaagataccgctcagaagaaaatgcaaagaaacta
atggaattagcttgcaacatgaagattggtcagaagaagctgaaaaaatatgaaaaagaa
tatcacaacatgagagaacagcaggcccagcgggaagaccccattgaacgatttgagcga
gagaataggcgtctacaagaagctaacatgaggttggaacaggaaaacgatgacttggct
catgagctggtgactagcaagattgcactgcggaaggacctggataacgctgaggaaaag
gcagatgcactgaataaggaactgctgatgacgaaacagaagttaattgatgcagaggaa
gagaagagacggctggaagaggagtctgctcagttaaaggaaatgtgccgtcgggaactt
gacaaggcagaatctgagattaaaaaaaacagttctatcatcggtgactacaagcagatt
tgttctcagttgagtgaaagactggagaagcagcagaccactaataaagtagaaattgag
aaaattcggcaaaaagtggatgactgtgagcgctgccgggaacttttcaacaaagaagga
cgtgtgaagggcatcagctcaaccaaggaggtgttagatgaagacacagatgaagagaag
gagacactcaagaaccagctgagagagatggagctggaactggcacaaaccaagctccag
ttggtggaagctgaatgcaagatccaggacttggagcaccacttaggcctcgctctcaat
gaggtacaggcagccaagaagacctggtttaaccgaacactgagctccataaagacagca
accggtgttcaagggaaagagacttgctga
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integrated database retrieval system
