Sciurus carolinensis (gray squirrel): 124965237
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Entry
124965237 CDS
T08117
Name
(RefSeq) activity-dependent neuroprotector homeobox protein 2-like
KO
K24878
activity-dependent neuroprotector homeobox protein 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124965237
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
124965237
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ADNP_N
zf-C2H2_4
Zf-C2H2_ZNF451_C
Homeodomain
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
124965237
NCBI-ProteinID:
XP_047381966
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Position
15:82826483..82859526
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AA seq
1134 aa
AA seq
DB search
MFQIPVENLDNIRKVRKRVKGILVDVGLDSCRELLKDLKGFDPGEKFFYNTSWGDVSLWE
PSGKKVRYRTKPYCCSLCRYSTKVLASLKNHLHRHHEDEADQELVIPCPNCTFASQPKVV
GKHFRMFHAPVRKVQNYTVNILGETKSSRSDVISFTCLKCSFSNTLYYSMKKHVLVAHFH
YLINSYFGLRTEEAGDQQKAGDAASEDRTPPPDRYYCKKCSANASSQDALMYHILTSDLH
RDLENKLRSVISEHIKRTGLLKQMHIAPKPAARVAIPPSSGAPGIPAPPPCFRLTLPQSG
QSPAVVQPVTVAPGSAGSLTHSPPAVAQSHVTLVSSPLPVCQSGLSLQPSAPQPVLLSHG
VPLSQPVNPPVLPLTQPVGPMNKPVGKSVLPVSQAVRPGVLPLTQPVGPISRPVGPGVLP
ASPSVTPGVLQAVSPGVISVGRAAPSGVLPAGQMTPAGVIPGQTATSGVLPTGQVAQSGA
LPVGQTAPSRVLPPGPTVPLRVLPAGQVVPSGLLSPSQAVPAGVVPVNQGVSSGVLQLSP
SVSTGVLPVSPPVRAGASQSTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPPG
TSMATVAPPQVPVQLLPSGTGTHGASSLPSLPSPPVLVSTAQSVFVQAAPSAADANQVLR
QAKQWKTCRVCNELFPSNVYQVHMEVAHKHGESKLCRVCNELFPTNVYQVHVEVAHKHGE
SKASEKLEPEKLAACAPFLKWVRERAVRCLSCKCAVSEEELMRHLLMHGLGCLFCPCTFH
DIRGLLEHSRTKHLGKKKLPLDYSNRGFQLDLDASGNLLFPHLDFSTILPREKLGEREVY
LAILAGIHSKSLVPVYVKVRPQPEALPRAPSRQKLTCPFCFGTFLTAEAYELHLKDRHHV
MPTVHTMLRSPAFKCIHCCGVYTGNMTLAAIAVHLLRCRSAPKDSSSGLQIQPGFIESSE
LLLVNGEVIPDSTFPVKRKLPDGHVGTDDQLEREEPLLVLNTEVAPGPEKGTSVVPLKRQ
RNEGRTEGLTAGDDMLQVLVLDPKKYEGRSYEDKKQFLRDYFHKRPYPSRKEVELLSSLL
WVWKIDVAAFFGKRRYICMKAIKNHKPSVLLGFDMSELKNVKHRLNFEYEPQHS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaattcctgtggaaaatcttgacaacatcagaaaggtgcggaaaagggtgaaa
ggcattcttgtggatgtcgggcttgacagctgcagggagttgctgaaggaccttaaaggc
tttgatccaggagagaagttcttctataacacgtcatggggagatgtttctctctgggaa
ccttctggaaagaaagtgagataccgaacaaagccatactgttgtagcctgtgcagatac
tcaacaaaggtgcttgcttcgctcaaaaaccatttacatcgtcaccacgaagatgaggct
gaccaggagctggtgatcccatgccccaactgcacctttgcctctcagcccaaggtggtg
ggcaagcacttcaggatgttccacgcacctgttcgaaaggtccagaactacacagtgaac
attttaggtgagactaagtcatctagaagcgacgtgatcagtttcacatgtttgaagtgt
agcttttcgaacaccttgtactacagcatgaagaagcacgtgctagtggctcattttcac
tacttgatcaactcttactttggcctgagaactgaggaggcaggggaccaacagaaagca
ggcgatgctgcttctgaggacaggacccccccgcccgaccggtactactgtaaaaagtgc
agtgccaatgccagcagccaggacgctctgatgtaccacatcctgacatccgacttgcac
agggacttggagaacaagctgaggtctgtgatttcagagcacatcaagaggacggggctc
ttaaagcagatgcacattgccccaaagccagctgcccgggtggccataccacccagcagc
ggcgcccctggcatcccggcaccgccaccttgctttcgtcttaccttgccacagagcggc
cagagcccggccgtggtgcagccagtgacagtggccccgggttctgctgggagcctgacc
cactccccgcctgcggtggcccagtcccatgtgaccctggtctccagccctctgcctgtg
tgccagagcggcctctccctgcagccctccgccccccagcctgtcctcctgtctcacggg
gtgccactcagccagcccgtgaacccccctgtgttgcccctcacccagcctgtggggccc
atgaataagcctgtcgggaagagcgtcctccccgtgagtcaggctgtccgccccggggtc
ttgcccctcacccagcctgtgggacccataagccgacctgttgggcctggtgtcttgcct
gccagtccctcggtcacccccggggttctgcaggctgtctcaccaggggtgatttctgtg
ggtagagcagcgccatcgggggtccttcctgcaggccaaatgacccctgcgggggtcatc
cctgggcagacagcgacttctggggttctccccactggccaggtggcccagtcaggagct
ctccctgttggccagacagccccttctcgggttcttccccctggtccgacggtgcccttg
agagttctccctgcaggccaggtggtcccatctggcctgctctctcccagccaggccgtc
cctgcgggggtggtccctgtgaaccagggtgtgagttctggtgtgctgcagctcagtccg
tcagtcagcacgggtgtcctgcccgtgagccccccggtgagggccggggcctcgcagagc
accaccttcctcacgtcaggctccattctcaggcagctcattcccactgggaagcaggtg
aatgggatccccacctacaccctggctccggtgtctgtcactctgcctgtgccccctggc
accagcatggccactgttgcccccccgcaggttcccgtccagctcttaccctcgggcaca
ggtacgcacggggccagttccctgcccagtctgccctccccaccggtgctggtgagcact
gcccagagcgtgttcgttcaggccgccccgtccgcagcggatgccaaccaggtgctcaga
caggccaagcagtggaaaacctgccgggtgtgcaacgagctcttcccgtccaacgtctac
caggtgcacatggaggtggctcacaagcacggcgagtccaagctctgccgggtgtgcaat
gagctctttccgaccaacgtctaccaggtgcatgtggaggtggctcataagcacggcgag
tccaaggcaagcgagaagctggagcccgagaagctggctgcatgcgcacccttcctgaag
tgggtgcgggagagggccgtgcggtgcctgtcctgcaagtgtgcggtctcggaggaggag
ctcatgcgccacctgctcatgcatggcctgggttgcctgttctgcccctgcaccttccac
gacatccggggcctcctggagcacagcaggactaagcacctgggcaagaagaagctgccc
ctggactacagcaacaggggcttccagctggacctggacgccagtggcaaccttctgttc
ccccatctcgacttcagcaccatactgccacgggagaagctgggggagcgggaggtctac
ctggccatccttgccgggatacactccaagtccctggtgcccgtgtacgttaaggtgagg
cctcagccggaggctctgcccagggcccccagcagacagaagctgacctgtcccttctgc
tttggcaccttcctgacagctgaggcctatgagctgcacctcaaggacaggcaccatgtg
atgccgaccgtccacacgatgctcaggtctccagccttcaagtgtatccactgctgtggg
gtctacactggaaacatgaccctggcggccatcgctgtgcacttgctgcgctgcagaagt
gctcccaaggacagcagctcgggtctgcagatccagccaggttttattgagagcagcgag
ctgctgttggtcaatggggaagtgattcctgattctacttttcctgtaaagaggaagttg
ccagatggccatgtgggaacagatgaccagctggagcgggaggagcctctgcttgtccta
aacactgaggtagcgccaggtccagagaaagggacaagtgttgtgcctctgaagagacag
aggaacgaaggcaggacagagggactcacggctggcgatgacatgctccaggtcttggta
ttagaccctaagaaatatgaaggccgttcctacgaggacaaaaagcagtttcttagagat
tatttccataagaggccctatcctagcagaaaagaagtagaattgctgtcctcgctctta
tgggtgtggaaaatcgatgtggctgcgttttttgggaaaaggagatatatttgcatgaaa
gcaataaaaaaccacaagccctctgtgcttctaggctttgatatgtctgaacttaaaaat
gttaagcacaggttgaactttgaatatgaaccacagcattcatag
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