Sciurus carolinensis (gray squirrel): 124965238
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Entry
124965238 CDS
T08117
Name
(RefSeq) partitioning defective 6 homolog gamma
KO
K06093
partitioning defective protein 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04015
Rap1 signaling pathway
ncar04144
Endocytosis
ncar04360
Axon guidance
ncar04390
Hippo signaling pathway
ncar04530
Tight junction
ncar05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
124965238
04390 Hippo signaling pathway
124965238
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124965238
09144 Cellular community - eukaryotes
04530 Tight junction
124965238
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124965238
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124965238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124965238
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
124965238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
124965238
NCBI-ProteinID:
XP_047381969
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All DBs
Position
15:complement(82868357..82924020)
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AA seq
383 aa
AA seq
DB search
MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLNRHKPGKFEDFYQLVVHTHHISNTEV
TIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKKKVLVT
LRDEGPRRRAHLDIGLPHDFRPVSSIIDVDILPETHRRVRLYRHGCEKPLGFYIRDGTSV
RVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANS
HNLIVTVKPANQRNNVVRSSRTSGSSGQSTDSTTSHHSSPATHVLQNFHPDEMESDEEAD
IVIEGTLEPQNVPKMQGTASGSLSRANGSNLTLRLQRDLALHGAGRESNGSIHRLLCSLK
ADPRHSLVLPQGGVEEHGPAITL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggagttttcacaagtctcagaccctgcgcttctacgactgcagcgcggtggaa
gtcaagagcaagtttggggccgaattccgaaggttctccttgaaccgccacaagcccggg
aagtttgaagatttctaccagctggtcgtgcacacccaccacatctctaacactgaggtg
accatcggctatgcagacgtgcatggggacctgcttcccatcaacaacgatgacaacttc
tgcaaggcagtctccagcgccaaccccctgctcagggtcttcatccagaaacgagaagag
gcagaccactacagcttcggggctggcaccctatccaggaagaagaaggtgctggtgacg
ctgagggacgagggcccgcgccggcgtgcccacctcgacattggcctgccccacgacttc
cgccctgtgtcctccatcatcgacgtggacatcctccccgagacgcaccgccgggtgagg
ctctacaggcacggctgcgagaagcctctgggtttctacatccgcgacggcaccagtgtg
cgggtcaccccccacgggctcgagaaggttccaggcatcttcatttcccgcatggtccct
gggggcctcgcagagagcaccgggctactggcagtgaatgacgaagtcctggaggtgaac
gggatcgaggtggcagggaagacactggaccaggtcacggacatgatgatcgccaacagc
cacaacctcatcgtcaccgtcaagcctgccaaccagaggaacaacgtggttcgcagcagc
cgcacgtccgggagctccggccagtccacggacagcaccaccagccaccacagctcgcca
gccacccacgtcctgcagaacttccaccctgatgagatggagagtgacgaggaggccgac
atcgtcatcgagggcactttggagcctcagaatgtccccaagatgcagggcacagcttcg
ggcagcctctcccgggccaacggcagcaacctcacactcaggctgcagcgggacctggcg
ctgcacggggccgggcgggagagcaacggcagcatccacagacttctctgctccctgaag
gcagacccccgccacagtctggtcctgccacagggcggggtggaagagcacgggccggcc
attactctctag
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