Sciurus carolinensis (gray squirrel): 124965253
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Entry
124965253 CDS
T08117
Name
(RefSeq) desmoglein-3-like isoform X1
KO
K07598
desmoglein 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04382
Cornified envelope formation
ncar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
124965253
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124965253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124965253
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124965253
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
124965253
NCBI-ProteinID:
XP_047382044
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All DBs
Position
15:41070449..41100715
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AA seq
987 aa
AA seq
DB search
MTWLFPRTTEALAILMVVVLVHGELRIETKGHHGEDETAVQQTKRRYKREWVKFAKPCRE
REDNSKRNPIAKITSDFQATQKITYRISGVGIDQPPFGIFLVDPNTGDINITAIVDREET
PSFLITCRALNVLGQDVEKPLILTVKILDVNDNAPVFSQSIFKGEIEENSASNSLVMILN
ATDADEPNHLNSKIAFKVVSQEPSGMPMFLISRNTGEVRTLTNSLDREQVSSYHLVVSGT
DKDGEGLSTQCECNIKVKDVNDNFPVLTDSQYSASIKENTLNSELLRFQVTDWDEEYTDN
WLAVYFFTSGNEGNWFEIETDPRTNEGILKVVKPLDYEQMQSMQFSIAVKNKAEFHQSII
SHYQVRSTPVTIQVVNVKEGISFRPASKTFTVQKGISSKKLIDYVLGTYQAIDEDTGKAA
SFVRYAMGRNDGGLLIIDPKTAQIKFVKNIDRDSSFIVNKTITAEVLAIDENTGKTSTGT
VHVEVPGFNENCAPVVLEKEEVCGPSPSVVVSAQNLKGNRYTGPYTFALEEKLQKLPAVW
TITALNATSALVRAQEKVSPGVYTIPLVVMDNQNMQCETPESLTLTVCDCDNRGICGTSA
PNKNPDIKYRNQPSRLGPDAIGLLLLGLLMLLLAPLLLLTCSCGTGPIGGGTGGFIPVPD
GSEGTIHQWGIEGAQPEDKEITNICVPPITANGADFMESSEVCTNTYAGGTVVEGASGME
MTTKLGAATGSGAAMGFGAASGLGAYSSGQSGTMRTRHSTGGTNKDYADGTINMNFLDSY
FSQKAFACAEEEDTQEASDCLLIYDNEGVDDAPGSPVGSLGCCSFIADDLDDSFLDSLGP
KFKKLAEISLGIDEEAKQAQPRTKDTGSATDPCGRTMEVQQPGSDRGQTLSGSQGAPAWS
ASGSFQPAISIPDPLQHGNYLVTETYSASGSFVQPTTAVFDPLLTQNVIVTERVICPLSS
VPGNTAVPTELRGSRNMLCTEDPCSHL
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacttggctcttccccagaaccacagaggctctggccattttaatggtggtggtattg
gttcatggagaattgcgaatagagacaaaaggacatcatggagaagatgagacagcagtt
caacaaaccaaacgaagatataaacgtgaatgggtgaaatttgcaaaaccctgcagagaa
cgagaagacaactcaaaaagaaacccaattgccaagattacttcagatttccaagcaacc
cagaaaattacctaccgaatttccggagtgggaattgatcagcccccgtttggaatcttt
ctcgttgacccaaacactggtgatattaacataacagccatagttgatcgagaggaaact
ccaagcttcctgatcacgtgtcgagctctaaatgtcttaggacaagatgtagaaaaacca
cttatattaacagtcaaaattttagatgttaatgataatgctccagtgttttcacaaagc
atattcaagggagaaattgaagaaaacagtgcttcaaactcactggtgatgatattgaat
gccacagacgcagatgaaccaaaccacttgaactctaaaattgccttcaaagttgtctcc
caggaaccttcaggcatgcccatgtttctcatcagcagaaacactggagaagtccgtact
ttgaccaattctctggatcgagagcaagtcagcagctaccatctggttgtgagtggcaca
gacaaagatggagaagggctgtcgactcaatgcgaatgtaatattaaagtgaaagatgtc
aatgataacttcccagtgcttacagactctcagtattcagcaagtattaaagaaaatact
ttaaattctgagttgcttcggtttcaagtgacagactgggatgaagagtacacagataat
tggctggccgtgtatttctttacctctggaaatgaagggaattggtttgaaatagaaact
gatcccagaaccaacgaaggcatcctgaaggtggttaagcctcttgattatgaacaaatg
caaagcatgcaatttagtattgctgtcaaaaacaaagccgaattccaccagtcaataatc
tctcattatcaagttcggtcaacccccgttacaatccaggttgtaaatgtcaaagaagga
atttcattccgccctgcttccaagacattcactgtgcaaaaaggcataagtagtaaaaaa
ctgattgattacgtcctgggaacatatcaagccattgatgaagacactggcaaagctgcc
tcatttgtcagatatgccatgggtcgtaatgatggtggcttgctaattattgatccaaaa
acagctcaaatcaaatttgtcaaaaacattgaccgggattcttctttcattgttaacaag
acaatcacagctgaagttctggccatagatgaaaacacgggcaaaacttccacaggcact
gtgcatgttgaagtacctggttttaatgaaaattgtgcaccagtggtcctggagaaggaa
gaagtctgtggaccctcaccttctgtggttgtctctgctcagaacctgaaagggaacaga
tacactggtccctacacctttgcactggaggagaaactgcagaagttgccagctgtgtgg
accatcacagcactcaacgctacctctgctcttgtgagagcccaggaaaaggtatctcct
ggagtctacacaattcccctcgtagttatggacaatcagaacatgcaatgtgagacacca
gagagcttgacactgacagtctgtgactgtgacaacagaggcatctgtggaacttctgcc
ccaaacaaaaaccctgatatcaagtacagaaatcagccctcaagactgggacctgatgcc
attggcctgctcctccttggactcttgatgttgctattggccccccttctgctgctgacc
tgttcctgtgggacaggtcccattggaggggggacaggtggttttatcccagttcctgat
ggttctgaaggaacaattcatcagtggggaatcgaaggagcgcaacctgaggacaaggaa
atcacaaatatctgtgtgccacctataacagccaatggagcagatttcatggaaagttct
gaagtttgtacaaatacatatgctgggggcacagtggtggaaggagcttcaggaatggaa
atgaccaccaagcttggagcagctactggatctggagctgccatggggtttggagcagcc
tctggacttggtgcctattcctctgggcagtcaggaacaatgaggacaagacattccacc
ggaggaaccaataaggactacgctgatgggaccataaacatgaatttcctagattcctac
ttttctcagaaagcatttgcctgtgcagaggaagaagacacccaggaagcaagtgactgt
ttgttgatctacgataatgaaggagtggatgacgcccctggttctcccgtgggttccctg
ggttgttgcagttttattgctgacgacctggacgacagtttcttggactcactcggcccc
aaatttaaaaaacttgcagagataagccttggtattgatgaggaagccaaacaagcccag
ccacgcactaaagacacgggttctgccactgacccctgtggtcgcaccatggaagtccag
cagccaggatctgacaggggccagactctgtctggtagccaaggggctcctgcttggtca
gcttctgggtctttccaaccagccatttccatccctgatcctctgcagcatggtaactac
ttggtaacagagacttactctgcttctggttcctttgtgcaacccaccactgcagtcttt
gatccacttctcacacaaaatgtaatagtgacagaaagggtgatttgtcccctttccagt
gttcctggtaacacagctgttccaacagagctacgagggtcacgcaatatgctctgtaca
gaagatccttgctcccacctatga
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