Sciurus carolinensis (gray squirrel): 124965253
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Entry
124965253 CDS
T08117
Name
(RefSeq) desmoglein-3-like isoform X1
KO
K07598
desmoglein 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124965253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124965253
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124965253
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
124965253
NCBI-ProteinID:
XP_047382044
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All DBs
Position
15:41070449..41100715
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AA seq
987 aa
AA seq
DB search
MTWLFPRTTEALAILMVVVLVHGELRIETKGHHGEDETAVQQTKRRYKREWVKFAKPCRE
REDNSKRNPIAKITSDFQATQKITYRISGVGIDQPPFGIFLVDPNTGDINITAIVDREET
PSFLITCRALNVLGQDVEKPLILTVKILDVNDNAPVFSQSIFKGEIEENSASNSLVMILN
ATDADEPNHLNSKIAFKVVSQEPSGMPMFLISRNTGEVRTLTNSLDREQVSSYHLVVSGT
DKDGEGLSTQCECNIKVKDVNDNFPVLTDSQYSASIKENTLNSELLRFQVTDWDEEYTDN
WLAVYFFTSGNEGNWFEIETDPRTNEGILKVVKPLDYEQMQSMQFSIAVKNKAEFHQSII
SHYQVRSTPVTIQVVNVKEGISFRPASKTFTVQKGISSKKLIDYVLGTYQAIDEDTGKAA
SFVRYAMGRNDGGLLIIDPKTAQIKFVKNIDRDSSFIVNKTITAEVLAIDENTGKTSTGT
VHVEVPGFNENCAPVVLEKEEVCGPSPSVVVSAQNLKGNRYTGPYTFALEEKLQKLPAVW
TITALNATSALVRAQEKVSPGVYTIPLVVMDNQNMQCETPESLTLTVCDCDNRGICGTSA
PNKNPDIKYRNQPSRLGPDAIGLLLLGLLMLLLAPLLLLTCSCGTGPIGGGTGGFIPVPD
GSEGTIHQWGIEGAQPEDKEITNICVPPITANGADFMESSEVCTNTYAGGTVVEGASGME
MTTKLGAATGSGAAMGFGAASGLGAYSSGQSGTMRTRHSTGGTNKDYADGTINMNFLDSY
FSQKAFACAEEEDTQEASDCLLIYDNEGVDDAPGSPVGSLGCCSFIADDLDDSFLDSLGP
KFKKLAEISLGIDEEAKQAQPRTKDTGSATDPCGRTMEVQQPGSDRGQTLSGSQGAPAWS
ASGSFQPAISIPDPLQHGNYLVTETYSASGSFVQPTTAVFDPLLTQNVIVTERVICPLSS
VPGNTAVPTELRGSRNMLCTEDPCSHL
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacttggctcttccccagaaccacagaggctctggccattttaatggtggtggtattg
gttcatggagaattgcgaatagagacaaaaggacatcatggagaagatgagacagcagtt
caacaaaccaaacgaagatataaacgtgaatgggtgaaatttgcaaaaccctgcagagaa
cgagaagacaactcaaaaagaaacccaattgccaagattacttcagatttccaagcaacc
cagaaaattacctaccgaatttccggagtgggaattgatcagcccccgtttggaatcttt
ctcgttgacccaaacactggtgatattaacataacagccatagttgatcgagaggaaact
ccaagcttcctgatcacgtgtcgagctctaaatgtcttaggacaagatgtagaaaaacca
cttatattaacagtcaaaattttagatgttaatgataatgctccagtgttttcacaaagc
atattcaagggagaaattgaagaaaacagtgcttcaaactcactggtgatgatattgaat
gccacagacgcagatgaaccaaaccacttgaactctaaaattgccttcaaagttgtctcc
caggaaccttcaggcatgcccatgtttctcatcagcagaaacactggagaagtccgtact
ttgaccaattctctggatcgagagcaagtcagcagctaccatctggttgtgagtggcaca
gacaaagatggagaagggctgtcgactcaatgcgaatgtaatattaaagtgaaagatgtc
aatgataacttcccagtgcttacagactctcagtattcagcaagtattaaagaaaatact
ttaaattctgagttgcttcggtttcaagtgacagactgggatgaagagtacacagataat
tggctggccgtgtatttctttacctctggaaatgaagggaattggtttgaaatagaaact
gatcccagaaccaacgaaggcatcctgaaggtggttaagcctcttgattatgaacaaatg
caaagcatgcaatttagtattgctgtcaaaaacaaagccgaattccaccagtcaataatc
tctcattatcaagttcggtcaacccccgttacaatccaggttgtaaatgtcaaagaagga
atttcattccgccctgcttccaagacattcactgtgcaaaaaggcataagtagtaaaaaa
ctgattgattacgtcctgggaacatatcaagccattgatgaagacactggcaaagctgcc
tcatttgtcagatatgccatgggtcgtaatgatggtggcttgctaattattgatccaaaa
acagctcaaatcaaatttgtcaaaaacattgaccgggattcttctttcattgttaacaag
acaatcacagctgaagttctggccatagatgaaaacacgggcaaaacttccacaggcact
gtgcatgttgaagtacctggttttaatgaaaattgtgcaccagtggtcctggagaaggaa
gaagtctgtggaccctcaccttctgtggttgtctctgctcagaacctgaaagggaacaga
tacactggtccctacacctttgcactggaggagaaactgcagaagttgccagctgtgtgg
accatcacagcactcaacgctacctctgctcttgtgagagcccaggaaaaggtatctcct
ggagtctacacaattcccctcgtagttatggacaatcagaacatgcaatgtgagacacca
gagagcttgacactgacagtctgtgactgtgacaacagaggcatctgtggaacttctgcc
ccaaacaaaaaccctgatatcaagtacagaaatcagccctcaagactgggacctgatgcc
attggcctgctcctccttggactcttgatgttgctattggccccccttctgctgctgacc
tgttcctgtgggacaggtcccattggaggggggacaggtggttttatcccagttcctgat
ggttctgaaggaacaattcatcagtggggaatcgaaggagcgcaacctgaggacaaggaa
atcacaaatatctgtgtgccacctataacagccaatggagcagatttcatggaaagttct
gaagtttgtacaaatacatatgctgggggcacagtggtggaaggagcttcaggaatggaa
atgaccaccaagcttggagcagctactggatctggagctgccatggggtttggagcagcc
tctggacttggtgcctattcctctgggcagtcaggaacaatgaggacaagacattccacc
ggaggaaccaataaggactacgctgatgggaccataaacatgaatttcctagattcctac
ttttctcagaaagcatttgcctgtgcagaggaagaagacacccaggaagcaagtgactgt
ttgttgatctacgataatgaaggagtggatgacgcccctggttctcccgtgggttccctg
ggttgttgcagttttattgctgacgacctggacgacagtttcttggactcactcggcccc
aaatttaaaaaacttgcagagataagccttggtattgatgaggaagccaaacaagcccag
ccacgcactaaagacacgggttctgccactgacccctgtggtcgcaccatggaagtccag
cagccaggatctgacaggggccagactctgtctggtagccaaggggctcctgcttggtca
gcttctgggtctttccaaccagccatttccatccctgatcctctgcagcatggtaactac
ttggtaacagagacttactctgcttctggttcctttgtgcaacccaccactgcagtcttt
gatccacttctcacacaaaatgtaatagtgacagaaagggtgatttgtcccctttccagt
gttcctggtaacacagctgttccaacagagctacgagggtcacgcaatatgctctgtaca
gaagatccttgctcccacctatga
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