Sciurus carolinensis (gray squirrel): 124965272
Help
Entry
124965272 CDS
T08117
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecules
ncar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124965272
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124965272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ncar00535
]
124965272
Proteoglycans [BR:
ncar00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
124965272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
124965272
NCBI-ProteinID:
XP_047382103
LinkDB
All DBs
Position
1:187150847..187183798
Genome browser
AA seq
438 aa
AA seq
DB search
MKPGPPHRAGAAAGNGAAAAPGARGLLLPPLLLLLLAGRAAGAQRWRSENFERPVDLEGS
GDDDAFPDDELDDLYSGSGSGYFEQESGLETAVRFSPDVALAVSTTPALLPTTDIQPVGT
PFEELPSESPTPEPVTSPPVVTEAPEEPSQRATTISTTTATTTAATTGAPTVATVPATEA
TAAPSIPAASPSTATTALARTTGIRRLPPLPLTTAATARATSPAAPSPPTTVADLDTEAP
TPRLVSTATSRPGALPRPATTQEPDVTERSTLPLGTTAPGPTEVAQTPIPESFLTTIRDE
PEVPVSGGPSGDFELPEEETTQPDAANEVVAVGGAAAKPSPPPGTLPKGARPGPGLLDNA
IDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYTLEEP
KQASVTYQKPDKQEEFYA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggggccgccgcaccgcgccggggccgcagccgggaacggggccgcggccgcg
cccggggcccgcgggctgctcctgccgccgctgctgctgctgctactggccgggcgcgcc
gcgggggctcagcgctggcgcagtgagaattttgagaggccggtggacctggagggctct
ggggacgacgacgccttcccggacgacgagctggacgacctctactcggggtcgggctcg
ggctacttcgagcaggagtcaggcctggagacagccgtgcggttcagccccgacgtggcc
ctggctgtgtccaccacgcctgccctgctgcccaccacggacatccagcctgtgggcacc
ccatttgaagagctcccctccgagagccccactccggagcctgtcaccagccctccagtg
gtgacagaggccccggaggaacccagccagagagctaccaccatctccaccaccacagcc
accaccactgctgccaccacaggggcccccacggtggccacggtgcctgccacagaggcc
accgctgcccccagcatccctgcagcatccccatccacggccaccactgcacttgcgagg
accaccggcatccggagacttccgcctcttccgctgaccacagctgccacagcccgggcc
acctctccagcggcgccctcaccccccaccacagtggccgacttggacacggaggcccct
acacccaggctggtcagcacagctacctcccggccaggagcccttcctaggccggctacc
acccaggagcctgatgtcaccgagaggagcaccctgccgctggggaccaccgcccctgga
cccacagaggtggctcagaccccaattccggagtccttcctgactacaatccgggatgag
ccagaggtgccagtgagtggtggccccagtggggactttgagctgccagaagaagagacc
acacagccagacgcagccaatgaggtggtggctgtgggaggggcagcagccaagccgtca
cctccgccagggacactgcccaagggtgcccgcccaggccctggcctcctggacaatgcc
atcgattcgggcagttctgctgctcagctgccccagaagagcatcctggagcggaaggag
gtgctcgtagccgtgattgtgggtggggtggtgggcgccctcttcgctgccttcctggtc
acgctgctcatctaccgcatgaagaagaaggacgagggcagctacacgctggaggagccc
aagcaggcgagcgtcacctaccagaagcctgacaagcaggaggagttctacgcctag
DBGET
integrated database retrieval system