Sciurus carolinensis (gray squirrel): 124965279
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Entry
124965279 CDS
T08117
Name
(RefSeq) AFG3-like protein 2 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
124965279
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124965279
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124965279
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
124965279
Chaperones and folding catalysts [BR:
ncar03110
]
Other chaperones and cochaperones
AAA proteases
124965279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
RuvB_N
AAA_5
AAA_16
TIP49
nSTAND3
AAA_14
gpW
AAA_2
AAA_17
AAA_28
AAA_33
ThcOx
IstB_IS21
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
124965279
NCBI-ProteinID:
XP_047382068
LinkDB
All DBs
Position
15:complement(2883978..2936182)
Genome browser
AA seq
806 aa
AA seq
DB search
MAHRCLLLWGRGGCRPRGLPPLLLPGGGAGRGERRCLRTLYRYATAQATTSRNSLLIDVI
AAYQRFCSRPPKGFEKYFPNGKNGKKISEPQEVMREKKESKTAATPRSSGGGGAGGGKRR
GKKDDSHWWSRFQKGDFPWDDKDFRMYFMWTALFWGGVMFYFLFKSSGREITWKDFVNNY
LSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGEN
RVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVL
KDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAK
ATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG
NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPD
IKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS
INEKHFEQAIERVIGGLEKKTQVLQPEEKRTVAYHEAGHAVAGWYLEHADPLLKVSIIPR
GKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYA
QIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRVLINDAYRRTVALLTEK
KAEVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDW
NKEREKEKEEPAGEKVATQMQGWRPF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccgctgcctgctgctgtggggccgcggcggctgccggccccgcggcctcccg
ccgctcctcctgcccggcggcggcgcgggccgcggtgagcggcgctgcctgcggacgctt
tatcgatatgctacagctcaagcaacaaccagcagaaattctcttctgatagatgtaatt
gctgcatatcaaagattctgttctcgacctcccaaaggatttgaaaaatattttcctaat
ggaaaaaatgggaaaaaaattagtgaaccacaagaagttatgagagaaaaaaaagaatca
aaaacagctgctaccccacgctcttctggaggaggaggtgctggtggaggaaaacgccgt
ggcaagaaagatgattctcactggtggtccaggttccagaagggtgactttccatgggac
gacaaggatttcaggatgtactttatgtggactgctctgttttggggtggagtcatgttt
tacttcctcttcaagagctcgggcagagaaatcacgtggaaggactttgtcaataactat
ctttctaaaggagtagtagacagactggaagttgtcaataagcgttttgttcgggtgact
tttacaccaggaaaaactccagttgatgggcaatatgtgtggtttaatattggcagtgta
gacacctttgagcggaatctggaaaccttacagcaagaattgggcatagaaggggaaaat
cgggtgcctgttgtctacatagctgaaagtgacggctcttttctgctgagcatgttgcct
acggtgctcatcattgcttttctcctgtacaccataagaagagggcccgcaggcattggg
cgaactggccggggcatgggtggcctcttcagtgttggggaaaccacagccaaggtctta
aaggatgaaatagatgtgaaattcaaagatgtggctggttgtgaggaggccaagctggag
atcatggaatttgtaaatttcttgaaaaacccgaagcagtatcaagacctaggagcaaaa
atcccaaagggtgccattctcactggtcctccaggcacggggaagacactgctagcgaag
gccaccgctggagaagccaacgtccccttcatcactgttagtggatctgagtttttagag
atgttcgttggtgtgggtccagctagagtccgagacttatttgcccttgctcgaaagaac
gccccttgcattctcttcattgatgagattgatgcagtaggaaggaagagagggcgaggc
aattttggagggcagagtgagcaggagaacacactcaatcagctgctcgtggagatggat
ggttttaacacaacaacaaacgtggtcattttggcgggtaccaaccgaccagatatcctg
gacccagcgctgatgcggccggggcgctttgacaggcagatctttattggtccaccagac
ataaaaggaagagcctctattttcaaagttcatctccgaccactgaaactggatagcacc
ctagagaaggaaaagctggccagaaaactggcatctttaactccagggttctcaggagct
gatgtcgccaatgtctgtaacgaggctgctttgattgctgcaagacacctctcggattcc
ataaatgagaaacactttgaacaagcaatcgagcgagtgattggtggcctggagaaaaaa
acccaggttctgcagcctgaggagaagaggacagtggcgtaccacgaagcagggcatgcg
gtcgctggctggtacctggagcatgcagaccccctcttaaaggtgtccatcatcccgcgc
ggcaaaggactgggctatgctcagtatttgcccaaggagcagtatctgtacaccaaggag
cagctcctggataggatgtgcatgactttgggcggtcgtgtctctgaggagatcttcttt
ggaaggatcacaactggtgcgcaggatgacttgaggaaagtcactcagagtgcctacgcc
caaattgttcagtttggcatgaatgagaaggtggggcagatctcctttgacctcccacgc
cagggtgacatggtgctagagaagccgtacagcgaagccaccgccaggctcatagacgac
gaggtgcgcgtgcttattaacgatgcctatagaagaaccgtcgccctcctcacagagaag
aaggccgaggtggagaaggttgctcttctattgttagaaaaagaagtattagataaaaat
gatatggttgaacttctgggccccagaccattcgcagaaaagtctacgtatgaagaattc
gtggaaggcactggcagcttggacgaggacacttctcttccagagggcctgaaggactgg
aacaaggagcgagagaaggagaaagaggagcccgcaggcgagaaagtcgccacccagatg
caagggtggagaccgttttag
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