Sciurus carolinensis (gray squirrel): 124965282
Help
Entry
124965282 CDS
T08117
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124965282
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124965282
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124965282
Protein phosphatases and associated proteins [BR:
ncar01009
]
HAD phosphatases
Fcp/Scp phosphatases
124965282
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124965282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
BRCT
PTCB-BRCT
Biotin_lipoyl
LIG3_BRCT
BSH_CusB
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
124965282
NCBI-ProteinID:
XP_047382072
LinkDB
All DBs
Position
15:82579190..82631442
Genome browser
AA seq
966 aa
AA seq
DB search
MEVPPAARLPAAGAPTAAVAEVRCPGTAPLRLLEWRVAAGATVRIGSVLAVCEAASSAQP
AGPAPARAASGGCVRAARAERRLRSERAGVVRELCAQPGQVVAPGALLVTLEGCSHPVVM
KGLCAECGQDLTQLQSKNGEQQVPLSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRN
RKLVLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLY
ELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCI
IDDREDVWKFAPNLITVKKYVYFPGTGDVNAPPGYRESQARKKVNHSSKGADVLEQAPSV
KDPEEGRPVPGAERSNGLGKPTRELNGSEAVLGTAPGKADERDAWPSPRAPCGREPAEAP
EPQAQASCEPVGRTSPGAQPTQGASGTELDFDLSSDSESSESEGPKSSSSTSEGESEKRS
RKRPLAAQDAARAPQQGGPPDVGGGRPAGAGPPGEPGSRVHTQDKGPDLDVQEEGERDGL
CGLGNGCVDRKEAETESQNSEQSGITAGESLDQSMEEEEEDTDDDDHLIHLEEILVRVHT
DYYTRYDRYLSQELEEAPDIRKIVPELKSKVLADVAVIFSGLHPTNFPVEKTREHYHATA
LGARVLTQLVLSPDAPDRATHLIAARAGTEKVRQAQECRHLHVVSPDWLWSCLERWDKVE
EQLFPLSEDDARVHSRENSPAAFPDRHSVLPAALFHPTPVHPKAQPGPEVRIYDSNTGKL
IRTGTQGPAPVPPGPLPVLGEPPSFRAVQPQQPQMFGEELPDVRTGERPGPARRKRQPSL
SETMPLYTLCKEDLESMDKEVDDILGEGSDDSDSEKRRPEEQEQEREGAAQPRAPRAPRG
QPLGPASSSDRSTTGARGPRGHKRKLSEEDAASESSKESSNEDEEGSSSEADEMAAALEA
ELDGLM
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgccgcctgcggcccgccttcccgccgcgggcgctccgacggcggccgtggcc
gaggtgcgctgccctggcaccgcgccgctgcgcctgctcgagtggagggtggcggcgggc
gcgactgtgcgcatcggctcggtgctggccgtgtgcgaggccgcctcctccgcgcagccc
gccgggcccgccccggcccgtgcagcctctgggggctgcgtgcgcgccgcgcgggctgag
cgcaggctcaggtcggagcgcgcgggcgtggtgcgggagctgtgcgcgcagccgggccag
gtggtggcccctggagccctcttggtgacgttggaaggatgcagccacccggttgtcatg
aagggcttgtgcgctgagtgtggccaggacttaacccagctgcagagcaagaatggcgag
cagcaggtgcccctgtccacagcaactgtgtccatggtacacagcgtgccggagctgatg
gtgagctctgagcaagctgaacaacttggaagggaagatcagcaaagactacatcgaaac
agaaaactagtcctcatggttgatttggaccagaccctaatacacacaacagagcaacat
tgtccacagatgtcaaacaagggcatcttccatttccagctgggccggggcgagcccatg
ctgcacacccggctgcgcccccactgcaaggacttcttggagaagatcgccaagctctac
gagctgcacgtcttcacttttggcagccggctgtatgcacacaccatcgcaggcttttta
gaccctgagaagaagcttttctcccaccggatcctgtcccgggatgagtgcatcgatccg
ttttctaaaacaggaaacctgcgcaatctctttccctgtggagactccatggtctgcatc
attgatgaccgggaagatgtctggaagttcgcccccaacctgataactgtgaagaagtat
gtgtatttcccaggcacaggtgacgtgaacgcgccccctgggtaccgggagtctcaggcg
cggaagaaagtgaaccattcttctaaaggtgctgacgtcttggaacaagctccatctgtg
aaagaccctgaggaaggcagacccgttcctggggcagagcggagcaatggccttggaaag
cctacccgagagctgaatggcagtgaggctgtgctgggaacggctcctggcaaggcagac
gagcgggacgcctggccctctccccgggccccttgtggccgtgagccggcagaagctcca
gagccccaagcccaagcatcttgtgaaccagttggtcggacctccccaggggcacagccc
acacagggtgcgtctggtacagagttagattttgatttgtccagtgacagcgagagcagc
gagtcggagggtcccaagtcctcctcctccacttctgagggggaaagtgagaagagaagc
cgaaaaagacctctggctgcccaggatgcagcaagagccccacagcagggaggcccacct
gacgtgggcggggggagacctgcaggagcgggccccccaggagagccgggctccagagtc
cacacgcaggacaaagggccagacctggatgtgcaggaggagggcgagcgagacggcctc
tgtggcctgggcaatggctgtgtggacaggaaggaggcggagacagagtcccagaacagc
gagcagtcgggcatcaccgcgggcgagtccctggaccagagcatggaggaggaggaggag
gacacggacgacgacgaccacctgatccacctggaggagatcctggtgcgcgtgcacacg
gactactacacgcggtacgacaggtacctcagccaggagctcgaggaagccccggacatc
cgcaagatcgtgccagagctcaagagcaaggtgctggcggacgtggccgtgatattcagt
gggctgcacccgacaaacttccccgtggagaagacccgggagcactaccacgccacagcc
ttgggggccagggtcctcacccagctggtgctgagccccgacgcccccgacagggccaca
cacctgatcgcagcacgggctggcacagagaaggtgcggcaggcacaggagtgcaggcac
ctgcatgtggtcagccccgactggctgtggagctgcctggagcgctgggacaaggtggag
gagcagctcttcccgctctcagaggacgacgcccgggtgcacagcagggagaacagcccc
gcagcctttcccgacaggcatagtgtgcttccagcagccctgttccacccgacgcccgtc
caccccaaggcccagcctggccctgaggtcaggatctatgactccaacacagggaagctc
atcaggacgggcacccagggcccagcgccagtgccccccggccccctgcctgtcctcggg
gagcccccatccttcagagccgtccagccacagcagccacagatgtttggtgaggagctg
cccgacgtgcgcactggagagcggcctggccctgctaggaggaagcggcagcccagcctg
tcggagaccatgcccctgtacacgctgtgcaaggaggacctggagagcatggacaaggag
gttgacgacatcctgggagaaggcagcgacgacagcgacagcgagaagaggaggccggag
gagcaggagcaggagcgggagggcgccgcacagccccgggccccccgggccccccggggg
cagccgctcggaccagcctcgtccagcgaccggagcaccacaggcgcccgtggtcccaga
ggccacaagagaaagctgagcgaggaggacgctgccagcgagtccagcaaggagtccagc
aacgaggacgaggagggcagcagctcggaggcggacgagatggcggcagcactggaggcg
gagctggacggcctgatgtga
DBGET
integrated database retrieval system
