Sciurus carolinensis (gray squirrel): 124965285
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Entry
124965285 CDS
T08117
Name
(RefSeq) runt-related transcription factor 3 isoform X1
KO
K09279
runt-related transcription factor 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04658
Th1 and Th2 cell differentiation
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
124965285
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124965285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124965285
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
124965285
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
124965285
NCBI-ProteinID:
XP_047382082
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All DBs
Position
1:191636003..191689187
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AA seq
449 aa
AA seq
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MASNSIFDSFPAYSTTFVRDPSTSRRFTPPSTAFPCGGGGGGKMGENSGALSAQAAVGPG
GRARPEVRSMVDVLADHAGELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGT
VVTVMAGNDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQVAT
YHRAIKVTVDGPREPRRNERSREEKQSQEKGRSVRRGGRGSSRGHRQKIEDQTKVFPDRF
GDLERLRMRVAPSTPSPRGSLSTTSHFSSQGQTPIQGTSELTPFSDPRQFDRSFPALPPL
SESRFPDPRMHYPGAMSAAFSYSAAPSGGSLGGLSVAGMPAAGRFHHTYLPPPYPGAPQS
QSGPFPANPAPYHLYYGGASGSYQFSMVAGERSPSRMLASCPGGAAPAGNLMNPSLGGPG
DVEADGSHSNSPTALSTPGRMDEAVWRPY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacagcatcttcgactccttcccggcctactcgacgaccttcgtccgcgac
ccgagcaccagccgccgcttcacacccccctccacggccttcccctgcggcggcggcggc
ggcggcaagatgggcgagaacagcggcgcgctgagcgcgcaggcggccgtggggcccggc
gggcgcgcccggcccgaagtgcgctcgatggtggacgtgctggcggaccacgcgggagag
ctcgtgcgcaccgacagccccaacttcctctgctccgtcctgccctctcactggcgctgc
aacaagacgctgccggtcgccttcaaggtggtggcactgggagatgtgccggatggaacg
gtggtgacggtgatggccggcaatgacgagaactactctgctgagctgcgcaatgcctcg
gcggtcatgaagaaccaggtggccagattcaatgacctgcgcttcgtgggccgcagtggg
cgagggaagagcttcacactgaccatcactgtgttcaccaaccccacccaagtggccacc
taccaccgagccatcaaagtcaccgtggatggaccccgtgagccccgacgtaacgagaga
tcccgtgaggaaaagcaaagccaggagaagggccggagcgtgcggagggggggccggggg
tcctcgagagggcaccggcagaagatagaagaccagaccaaggtgttccccgaccgtttc
ggggacctggagcggctgcgcatgcgggtggcgcccagcacgcccagcccccgcggctcc
ctcagcaccacgagccacttcagcagccaaggccagacccccatccaaggcacctcggag
ctgacgcccttctccgacccgcgccagttcgaccgctccttcccggcgctgccgccgctc
tcggagagccgcttccccgaccccaggatgcactacccgggggccatgtcggccgccttc
tcctacagcgccgcgccctcgggcggcagcctgggcggcctcagcgtggcgggcatgccg
gccgccggccgcttccaccacacctacctcccgccgccctaccccggcgcgccgcagagc
cagagcggccccttccccgccaaccccgcgccctaccacctctactacggcggcgcctcg
ggctcctaccagttctccatggtggcgggcgagcgctcgccctcgcgcatgctggcctcc
tgccccggcggcgcggcgcccgccggcaacctcatgaaccccagcctgggcggcccgggc
gacgtggaggccgacggcagccacagcaactcgcccaccgccctcagcacgccgggccgc
atggacgaggccgtgtggcggccctactga
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