Sciurus carolinensis (gray squirrel): 124965416
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Entry
124965416 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1-like
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04020
Calcium signaling pathway
ncar04022
cGMP-PKG signaling pathway
ncar04024
cAMP signaling pathway
ncar04148
Efferocytosis
ncar04218
Cellular senescence
ncar04310
Wnt signaling pathway
ncar04380
Osteoclast differentiation
ncar04625
C-type lectin receptor signaling pathway
ncar04650
Natural killer cell mediated cytotoxicity
ncar04658
Th1 and Th2 cell differentiation
ncar04659
Th17 cell differentiation
ncar04660
T cell receptor signaling pathway
ncar04662
B cell receptor signaling pathway
ncar04921
Oxytocin signaling pathway
ncar04933
AGE-RAGE signaling pathway in diabetic complications
ncar05135
Yersinia infection
ncar05161
Hepatitis B
ncar05163
Human cytomegalovirus infection
ncar05166
Human T-cell leukemia virus 1 infection
ncar05167
Kaposi sarcoma-associated herpesvirus infection
ncar05170
Human immunodeficiency virus 1 infection
ncar05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
ncar05321
Inflammatory bowel disease
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124965416
04310 Wnt signaling pathway
124965416
04020 Calcium signaling pathway
124965416
04024 cAMP signaling pathway
124965416
04022 cGMP-PKG signaling pathway
124965416
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124965416
09143 Cell growth and death
04218 Cellular senescence
124965416
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124965416
04650 Natural killer cell mediated cytotoxicity
124965416
04660 T cell receptor signaling pathway
124965416
04658 Th1 and Th2 cell differentiation
124965416
04659 Th17 cell differentiation
124965416
04662 B cell receptor signaling pathway
124965416
09152 Endocrine system
04921 Oxytocin signaling pathway
124965416
09158 Development and regeneration
04380 Osteoclast differentiation
124965416
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
124965416
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
124965416
05170 Human immunodeficiency virus 1 infection
124965416
05161 Hepatitis B
124965416
05163 Human cytomegalovirus infection
124965416
05167 Kaposi sarcoma-associated herpesvirus infection
124965416
09171 Infectious disease: bacterial
05135 Yersinia infection
124965416
09163 Immune disease
05321 Inflammatory bowel disease
124965416
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124965416
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
124965416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124965416
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
124965416
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
124965416
NCBI-ProteinID:
XP_047382214
EnsemblRapid:
ENSSCRG00010018695
LinkDB
All DBs
Position
15:82397372..82506421
Genome browser
AA seq
905 aa
AA seq
DB search
MPSTSFPVPSKFPLGPPAAVCGSGETLGPALPAVSTMKAAEEEHYSYAPSGVSSALPLPA
AHASLAAPCHDLQTSTPGISAVPSAGHPSGYGGAVDSGPAGYFLSSSNTRPNGAPTLESP
RIEITSYLGLHHGSSQFFHDVEVEDVLPSCKRSPSTATLNLPSLEAYRDPSCLSPASSLS
SRSCNSEASSFESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACHLLGSPRHSP
STSPRTSVTEESWLGARGSRPTSPCNKRKYSLNGRQPSCSPHHSPTPSPHGSPRVSVTED
TWLGNSTQYTSSAIVAAINALTTDSSLDLGEGVPIKSRKTTLEHLPSVALKVEPAGEELG
ATPPTSDLPPEEFTFQPLRKGPFCEQYLSVPQPPYQWAKPKSLTPATYVSPSLPALDWQL
PSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYVESEPLTLQLFIG
TADDRLLRPHAFYQVHRITGKTVSTTSHEAVLSNTKVLEVPLLPENNMRAIIDCAGILKL
RNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGRTLSLQVASNPIECSQRSAQELPLVE
KQSMDSHPVGGGKKMILSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCRPNSLVVE
IPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPVIKTEPTDDYEPALTCGPVS
QGLSPLPRPCYSQQLTMPPDPSSCLVAGFAPCPQRSSMLPTPPSASPKLHDLSSAAYSKG
IASPGHGHLGLQPLAAEDPTIQEVPRPLAVQPGSPEPPPPVLLQPQPSAHPPTTGHQQHQ
LPKGRRSEAPAARPRSLPGVREDSARNLAPVPVMVKREPEELDQFYLDDVNEIIRNDLCG
TEPRS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtaccagcttccctgtcccttccaagtttccactcggccctccggcagcagtc
tgcgggagcggagaaactttggggcccgcgttgcccgccgtcagcaccatgaaagcggcg
gaggaagaacactacagttatgcgccctccggggtcagctctgctctgccactccccgcg
gcacacgcctccttggcagccccgtgccacgacctccagacatccactcctggcatttca
gccgttccttcagctgggcacccctcggggtatggaggggccgtggacagcgggcccgca
gggtactttctgtcttctagcaacacccggcccaatggggccccgactctggagagccct
cgcatcgagatcacctcatacctcggcctgcaccatggcagcagccagtttttccatgac
gtggaggtggaggacgtgcttcccagctgcaagcggtcgccatccacggccaccctgaac
ctgcccagcctggaggcctacagagacccctcgtgcctgagcccagccagcagcctgtcc
tcccggagctgcaactccgaggcctcgtctttcgagtccaactactcgtacccgtacgcg
tcaccgcagacgtccccctggcagtcgccctgtgtgtcccccaagacgacggatcctgag
gaaggctttccccggggcctgggcgcctgccacctgctgggctccccccggcactccccg
tccacctcgccacggaccagtgtcaccgaagagagctggctgggcgcccgcggctcccgg
cccacgtcgccctgcaacaagcgcaagtacagcctcaacggccggcagccctcctgctcc
ccgcaccactcgcccacgccatccccgcatggctccccgcgggtcagcgtgaccgaggac
acctggctcggcaactccacccagtacaccagctcggccatcgtggcggccatcaacgcc
ctgaccaccgacagcagcctggacttgggtgagggagtccccatcaagtcccgcaagacc
accctggagcatctgccctcggtggcactcaaggtggagcccgctggggaggagctgggg
gccaccccgcccacctccgacctgccgcccgaggagttcaccttccagcccctgcggaag
ggccccttctgtgagcagtacctgtcggtgccacagcccccctaccagtgggccaagccc
aagtcgctgacccctgcaacctatgtgagcccgtctctgcccgccctcgactggcagctg
ccatcccactcgggcccgtatgagctgcggatcgaggtgcagcccaaatcccaccacaga
gctcactatgagacggaaggcagccggggggccgtgaaggcatcggccggaggacacccc
attgtgcagctgcacggatacgtggagagcgagccgctcacgctgcagttgttcatcggg
acggccgacgaccgcctgctgcggccccacgccttctaccaggtccaccggatcacaggg
aaaaccgtgtccaccaccagccacgaggccgtcctgtccaacaccaaggtcctggaggtc
ccgctgttgccggaaaacaacatgagagccatcattgattgtgctgggatcctgaagctc
agaaactctgacatcgagctgcggaaaggagagaccgacataggcaggaagaacacccgg
gtgcggctggtcttccgagtccacatcccacagcccagcggcaggacgctgtccctccag
gtcgcctcaaaccccatcgaatgctcccagcgctcggcccaggagctgccccttgtggag
aagcagagcatggacagccaccctgttggtggtgggaagaagatgattttgtcgggccac
aacttcctgcaggactccaaggtcatcttcgtggagaaggctccagatggccatcacgtc
tgggagatggaagccaagactgacagagacctgtgcagaccaaactccctggtggtcgag
attccacctttccgcaaccagagaataaccagccctgtccaagtcagcttctacgtctgc
aacgggaagagaaagaggagccagtaccagcacttcacctaccttcctgccaacgttcca
gttataaaaacagaacccacggacgactacgagcctgccctgacctgtggaccagtgagc
cagggactgagtccactcccaaggccgtgctacagccagcagctcaccatgccacctgac
cccagctcctgcctcgtggcgggcttcgccccctgtccccaaaggagcagcatgctgccc
acgcctcccagtgcaagcccaaagctccatgacctttcttccgctgcctactccaaggga
atcgccagcccaggccacggccaccttggacttcagccactggctgcagaggaccccacc
attcaggaggtgccgagacccctggccgtgcagcccggctcgcccgagccgccccctccc
gtcctgctgcagccgcagccctcagcccaccctcccaccacgggccaccagcagcaccaa
ctaccaaagggtcgaaggagcgaggctcccgccgccaggccacggtcactgccaggggtg
cgtgaggacagtgctcgtaacttggcccctgtgcctgtaatggtcaagcgagaacctgaa
gaattggaccagttttacctggacgacgtaaatgaaatcatacgcaatgacctctgcggc
acggagcctcgctcgtag
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