KEGG   Sciurus carolinensis (gray squirrel): 124965416
Entry
124965416         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 1-like
  KO
K04446  nuclear factor of activated T-cells, cytoplasmic 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04010  MAPK signaling pathway
ncar04020  Calcium signaling pathway
ncar04022  cGMP-PKG signaling pathway
ncar04024  cAMP signaling pathway
ncar04148  Efferocytosis
ncar04218  Cellular senescence
ncar04310  Wnt signaling pathway
ncar04380  Osteoclast differentiation
ncar04625  C-type lectin receptor signaling pathway
ncar04650  Natural killer cell mediated cytotoxicity
ncar04658  Th1 and Th2 cell differentiation
ncar04659  Th17 cell differentiation
ncar04660  T cell receptor signaling pathway
ncar04662  B cell receptor signaling pathway
ncar04921  Oxytocin signaling pathway
ncar04933  AGE-RAGE signaling pathway in diabetic complications
ncar05135  Yersinia infection
ncar05161  Hepatitis B
ncar05163  Human cytomegalovirus infection
ncar05166  Human T-cell leukemia virus 1 infection
ncar05167  Kaposi sarcoma-associated herpesvirus infection
ncar05170  Human immunodeficiency virus 1 infection
ncar05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
ncar05321  Inflammatory bowel disease
ncar05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124965416
   04310 Wnt signaling pathway
    124965416
   04020 Calcium signaling pathway
    124965416
   04024 cAMP signaling pathway
    124965416
   04022 cGMP-PKG signaling pathway
    124965416
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    124965416
  09143 Cell growth and death
   04218 Cellular senescence
    124965416
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    124965416
   04650 Natural killer cell mediated cytotoxicity
    124965416
   04660 T cell receptor signaling pathway
    124965416
   04658 Th1 and Th2 cell differentiation
    124965416
   04659 Th17 cell differentiation
    124965416
   04662 B cell receptor signaling pathway
    124965416
  09152 Endocrine system
   04921 Oxytocin signaling pathway
    124965416
  09158 Development and regeneration
   04380 Osteoclast differentiation
    124965416
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    124965416
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    124965416
   05170 Human immunodeficiency virus 1 infection
    124965416
   05161 Hepatitis B
    124965416
   05163 Human cytomegalovirus infection
    124965416
   05167 Kaposi sarcoma-associated herpesvirus infection
    124965416
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    124965416
  09163 Immune disease
   05321 Inflammatory bowel disease
    124965416
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124965416
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    124965416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124965416
Transcription factors [BR:ncar03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) NF-AT
    124965416
SSDB
Motif
Pfam: RHD_dimer RHD_DNA_bind TIG
Other DBs
NCBI-GeneID: 124965416
NCBI-ProteinID: XP_047382214
EnsemblRapid: ENSSCRG00010018695
LinkDB
Position
15:82397372..82506421
AA seq 905 aa
MPSTSFPVPSKFPLGPPAAVCGSGETLGPALPAVSTMKAAEEEHYSYAPSGVSSALPLPA
AHASLAAPCHDLQTSTPGISAVPSAGHPSGYGGAVDSGPAGYFLSSSNTRPNGAPTLESP
RIEITSYLGLHHGSSQFFHDVEVEDVLPSCKRSPSTATLNLPSLEAYRDPSCLSPASSLS
SRSCNSEASSFESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRGLGACHLLGSPRHSP
STSPRTSVTEESWLGARGSRPTSPCNKRKYSLNGRQPSCSPHHSPTPSPHGSPRVSVTED
TWLGNSTQYTSSAIVAAINALTTDSSLDLGEGVPIKSRKTTLEHLPSVALKVEPAGEELG
ATPPTSDLPPEEFTFQPLRKGPFCEQYLSVPQPPYQWAKPKSLTPATYVSPSLPALDWQL
PSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYVESEPLTLQLFIG
TADDRLLRPHAFYQVHRITGKTVSTTSHEAVLSNTKVLEVPLLPENNMRAIIDCAGILKL
RNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGRTLSLQVASNPIECSQRSAQELPLVE
KQSMDSHPVGGGKKMILSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCRPNSLVVE
IPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPVIKTEPTDDYEPALTCGPVS
QGLSPLPRPCYSQQLTMPPDPSSCLVAGFAPCPQRSSMLPTPPSASPKLHDLSSAAYSKG
IASPGHGHLGLQPLAAEDPTIQEVPRPLAVQPGSPEPPPPVLLQPQPSAHPPTTGHQQHQ
LPKGRRSEAPAARPRSLPGVREDSARNLAPVPVMVKREPEELDQFYLDDVNEIIRNDLCG
TEPRS
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgccaagtaccagcttccctgtcccttccaagtttccactcggccctccggcagcagtc
tgcgggagcggagaaactttggggcccgcgttgcccgccgtcagcaccatgaaagcggcg
gaggaagaacactacagttatgcgccctccggggtcagctctgctctgccactccccgcg
gcacacgcctccttggcagccccgtgccacgacctccagacatccactcctggcatttca
gccgttccttcagctgggcacccctcggggtatggaggggccgtggacagcgggcccgca
gggtactttctgtcttctagcaacacccggcccaatggggccccgactctggagagccct
cgcatcgagatcacctcatacctcggcctgcaccatggcagcagccagtttttccatgac
gtggaggtggaggacgtgcttcccagctgcaagcggtcgccatccacggccaccctgaac
ctgcccagcctggaggcctacagagacccctcgtgcctgagcccagccagcagcctgtcc
tcccggagctgcaactccgaggcctcgtctttcgagtccaactactcgtacccgtacgcg
tcaccgcagacgtccccctggcagtcgccctgtgtgtcccccaagacgacggatcctgag
gaaggctttccccggggcctgggcgcctgccacctgctgggctccccccggcactccccg
tccacctcgccacggaccagtgtcaccgaagagagctggctgggcgcccgcggctcccgg
cccacgtcgccctgcaacaagcgcaagtacagcctcaacggccggcagccctcctgctcc
ccgcaccactcgcccacgccatccccgcatggctccccgcgggtcagcgtgaccgaggac
acctggctcggcaactccacccagtacaccagctcggccatcgtggcggccatcaacgcc
ctgaccaccgacagcagcctggacttgggtgagggagtccccatcaagtcccgcaagacc
accctggagcatctgccctcggtggcactcaaggtggagcccgctggggaggagctgggg
gccaccccgcccacctccgacctgccgcccgaggagttcaccttccagcccctgcggaag
ggccccttctgtgagcagtacctgtcggtgccacagcccccctaccagtgggccaagccc
aagtcgctgacccctgcaacctatgtgagcccgtctctgcccgccctcgactggcagctg
ccatcccactcgggcccgtatgagctgcggatcgaggtgcagcccaaatcccaccacaga
gctcactatgagacggaaggcagccggggggccgtgaaggcatcggccggaggacacccc
attgtgcagctgcacggatacgtggagagcgagccgctcacgctgcagttgttcatcggg
acggccgacgaccgcctgctgcggccccacgccttctaccaggtccaccggatcacaggg
aaaaccgtgtccaccaccagccacgaggccgtcctgtccaacaccaaggtcctggaggtc
ccgctgttgccggaaaacaacatgagagccatcattgattgtgctgggatcctgaagctc
agaaactctgacatcgagctgcggaaaggagagaccgacataggcaggaagaacacccgg
gtgcggctggtcttccgagtccacatcccacagcccagcggcaggacgctgtccctccag
gtcgcctcaaaccccatcgaatgctcccagcgctcggcccaggagctgccccttgtggag
aagcagagcatggacagccaccctgttggtggtgggaagaagatgattttgtcgggccac
aacttcctgcaggactccaaggtcatcttcgtggagaaggctccagatggccatcacgtc
tgggagatggaagccaagactgacagagacctgtgcagaccaaactccctggtggtcgag
attccacctttccgcaaccagagaataaccagccctgtccaagtcagcttctacgtctgc
aacgggaagagaaagaggagccagtaccagcacttcacctaccttcctgccaacgttcca
gttataaaaacagaacccacggacgactacgagcctgccctgacctgtggaccagtgagc
cagggactgagtccactcccaaggccgtgctacagccagcagctcaccatgccacctgac
cccagctcctgcctcgtggcgggcttcgccccctgtccccaaaggagcagcatgctgccc
acgcctcccagtgcaagcccaaagctccatgacctttcttccgctgcctactccaaggga
atcgccagcccaggccacggccaccttggacttcagccactggctgcagaggaccccacc
attcaggaggtgccgagacccctggccgtgcagcccggctcgcccgagccgccccctccc
gtcctgctgcagccgcagccctcagcccaccctcccaccacgggccaccagcagcaccaa
ctaccaaagggtcgaaggagcgaggctcccgccgccaggccacggtcactgccaggggtg
cgtgaggacagtgctcgtaacttggcccctgtgcctgtaatggtcaagcgagaacctgaa
gaattggaccagttttacctggacgacgtaaatgaaatcatacgcaatgacctctgcggc
acggagcctcgctcgtag

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