Sciurus carolinensis (gray squirrel): 124965443
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Entry
124965443 CDS
T08117
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124965443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124965443
04131 Membrane trafficking [BR:
ncar04131
]
124965443
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124965443
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124965443
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124965443
mRNA cycle factors
P-body specific factors
124965443
Membrane trafficking [BR:
ncar04131
]
Others
Actin-binding proteins
Myosins
124965443
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124965443
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124965443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
124965443
NCBI-ProteinID:
XP_047382284
EnsemblRapid:
ENSSCRG00010025147
LinkDB
All DBs
Position
15:complement(57187721..57510835)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSVSELYSQYTRVWIPDPNEVWRSAELTKDYKEGEKSLQLRLEDDTIREYPVDVQNNQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASETNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCAAASLPEFKELALTCAEDFFYTSQGGDTAIEGVD
DAEDFEKTRQAFTLLGVRESHQISIFKIIASILHLGSVEIQAERDGDSCSISPQDEHLSN
FCRLLGVEHNQMEHWLCHRKLVTTSETYVKTMSLQQVINARNALAKHIYAQLFGWIVEHI
NKALHTSIKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSSSQHFQK
PRMSNTAFIVVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFHDDKDPIH
ATAASGKGSSSKINIRSARPPMKASNKEHKKSVGHQFRTSLHLLMETLNATTPHYVRCIK
PNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLVKKRELANT
DKKAICKSVLESLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWL
QKVKYRRLKRATLTLQRYCRGHLARRLAAHLRRTRAAVVLQKQFRMRRARLAYQRVRRAA
VVIQAFARAMSVRRIYRQVLMEHKATIIQKHARGWMARRHFQQLRAAAIVIQCAFRRFKA
KQELKALKIEARSAEHLKRLNVGMENKVVQLQRKIDDQNKEFKTLSEQLSAVTSTHTMEV
EKLKRELARYQQNQGADASLQLQEEVQSLRTELQRAHSERRVLEDAHSREKDELRKRVAD
LEQENALLKDEKEQLNNRILCQSKDEFAQNSMKENLLMKKELEEERSRYQNLVKEYSRLE
QRYDNLRDEVTILKQTPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDALQQVEDIGVEK
AAMDMTVFLKLQKRVRELEQERKKLQMQLEKREQDSKKVQMEQPRNDTDLDQDADLAYNS
LKRQELESENKKLKNDLNELRKAVADQATQNTSSHSAPDSYSLLLNQLKLANEELEVRKE
EVLILRTQIVSADQRRLAGKSMEPNINARASWPNSEKHVDQEDAIEAYHGVCQTNSQTED
WGYLNEDGELGLAYQGLKQVARLLEAQLQAQSLEHEEQVENLKAQVEALKEEMDKQQQTF
CQTLLLSPEAQVEFGVQQEISRLTNENLDLKELVEKLEKNERKLKKQLKIYMKKVQDLEA
AQALAQSDRRHHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQMLSGTVPC
LPAYILYMCVRYADNTNDDLKVHSLLTSTINGIKKVLKKHNDDFEMTSFWLSNTCRLLHC
LKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVS
AMLENESIQGLSGVKPMGYRKRSSSMADGDNSYCLEAIIRQMNCFHTVMCDQGLDPEIIL
QVFKQLFYMITAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGRNLHQSGAAQTMEP
LIQAAQLLQLKKKTREDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRTIQA
QLQDRNDPQQLLLDSKHMFPVLFPFNPSSLTMDSIHIPACLSLEFLNEV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagcgagctttacagccagtacacaagggtctggatccctgacccgaatgaa
gtgtggcgctcagctgaattaaccaaggactacaaggagggggagaagagcctccagctc
agactggaagatgacactattcgggaatatccagttgatgtccagaacaaccagctgccg
cccttacggaatccagatatcttggtgggagaaaacgacctcactgcccttagctatctc
cacgagcctgcagttttgcataatctgaaggtccggttcttggagtccaaccacatctac
acttactgtggcattgtgcttgttgccataaatccttatgaacagttgccaatctatgga
caagatgtcatctatgcctacagtggtcaaaacatgggcgacatggatccccacatcttt
gctgttgcggaagaagcctacaagcagatggccagagatgagaagaaccagtccatcata
gtcagtggggagtcgggagctgggaagacggtgtcagccaagtacgccatgcgctacttt
gccacggtcggtggctcagccagtgaaaccaacatcgaggagaaggtcctggcatccagt
cccatcatggaggccatcgggaatgccaaaaccactcggaacgacaatagcagccgcttt
ggaaagtacattcagatcggctttgataaaaggtaccacatcattggggccaacatgagg
acctacctgttggagaagtcccgtgtggtctttcaggcagatgatgagaggaattaccac
atcttctaccagctctgtgctgctgccagtctcccagaatttaaagagcttgctctaaca
tgtgcagaggactttttctatacatcccagggaggagatacagccattgagggtgtcgat
gatgcagaggactttgagaagactcggcaagccttcacactgcttggagtgagagagtcc
catcagataagcatttttaagataattgcttctatcctgcaccttggaagtgtggagatt
caggctgagcgtgatggtgattcctgtagcatatcaccccaggatgaacacctgagcaac
ttctgccgcctgctaggggtggagcacaatcagatggagcactggctgtgccatcgcaag
ctggtcaccacctcagagacctacgtcaagaccatgtccctgcagcaggtcatcaatgca
cgcaatgccctggccaagcacatctatgcccagctgttcggctggattgtggagcacatc
aacaaggccctgcacacctccatcaagcagcactccttcatcggggtcctggacatctat
gggtttgaaacttttgaggttaacagtttcgagcagttttgtatcaactatgccaacgag
aagctccagcagcagttcaactcgcatgtgttcaaactagagcaagaagaatacatgaag
gagcagatcccttggaccttgattgacttttatgataatcaaccttgtattgatctcata
gaagctaaactgggtatcctggacctgttggatgaagaatgtaaggtccccaaaggaact
gaccagaactgggcccagaagctctatgaccggcactccagcagccagcacttccagaaa
ccccgcatgtccaacacggccttcattgtcgtccactttgcagataaggtggagtacctc
tcggatggttttctggagaaaaacagggacacggtgtatgaagagcagatcaacatcctg
aaggccagcaagttcccactagtggctgacttgtttcatgatgacaaggaccccattcat
gccaccgccgcatcggggaagggatcatcatcgaagatcaacattcgctctgccagaccc
cccatgaaggcctccaacaaggaacacaagaaatccgtgggccaccagttccgcacctcc
ttgcatctgctcatggagaccctgaatgctaccaccccgcattatgttcgctgcatcaag
cccaacgacgagaagctccccttccactttgacccaaagagagccgtgcagcagctcaga
gcctgtggcgtgctggagaccattcgcatcagtgcagctggctacccatccaggtggacc
taccacgacttcttcaaccggtaccgagtgctggtgaagaagcgggaacttgccaacaca
gacaagaaggccatctgcaagtctgtcctagagagcctcatcaaggatcctgacaagttc
cagtttggccgcactaagatcttcttccgggcaggccaagtggcctacctggagaaactg
cgggctgacaagttccgagcagccaccatcatgatccagaaaaccgtccgtggctggctg
cagaaggtgaagtaccgccggctgaagagggccaccttaaccctgcagcggtactgccga
ggacacctggcccgcaggctggctgcgcacctgcgaaggacgcgggcagctgtggtgctg
cagaagcagttccgcatgcggagggcccgtctggcctaccagagggtgcgcagggctgcc
gtcgtcattcaggccttcgcgagggccatgtccgtgcgcagaatctaccgccaggtcctc
atggagcacaaggctaccatcatccagaagcacgcccggggatggatggcacgcaggcat
ttccagcaactgagggctgcagccattgtcatccagtgtgccttccggaggttcaaggcc
aagcaggaactgaaggccctcaagattgaggcccgctcagcagagcacctgaaacgcctc
aacgtgggcatggagaacaaggtggtccagctgcagcggaagattgatgaccagaacaaa
gagttcaagaccctgtcggagcaactgtctgcagtcacctccacacacaccatggaggtg
gagaagctaaagagggagctggcacgttaccagcagaaccagggggctgatgccagcctg
cagctgcaggaggaggtgcagagcctgcgcacagagctgcagagagcccactcggagcgc
agggtcctggaggatgcccacagcagggagaaggacgagctgagaaagcgagttgcagac
ctggagcaagaaaatgctctcctgaaagatgagaaagaacagcttaacaaccgaatcctg
tgccagtctaaagatgaatttgcccaaaattccatgaaggagaacctcctgatgaagaaa
gagctggaggaggagcgttcccggtaccagaacctggtgaaggaatattcccggttggag
cagagatacgacaatcttcgggatgaggtgaccatcctaaagcaaaccccaggtcacagg
cggaacccatcaaaccaaagtagcttagaatcagactcgaattacccctccatctccaca
tctgagattggagacaccgaggatgccctccaacaggtggaggacattggcgtggagaag
gcagccatggacatgacagtgttcctgaagctgcagaagagagtgcgggagcttgagcag
gagaggaagaagctgcagatgcagctggagaagagagagcaggacagcaagaaagtccag
atggaacaaccaaggaatgatacagatttggaccaggatgcagatctggcctacaatagt
ctgaagaggcaggagctggagtcggagaacaagaagctgaagaatgacctgaatgagctg
aggaaagccgtagccgaccaagccacccagaacacctcctctcacagcgcccctgacagt
tacagcctcctgctaaaccagctcaagctggccaatgaggagctagaggttcgaaaggag
gaggtgctcatcctcaggacccagattgtgagcgctgaccagcgccgacttgctggcaag
agcatggagccgaacatcaatgccagagcaagttggcctaacagtgaaaagcacgtggac
caggaagatgccatcgaggcctaccatggggtctgccagaccaacagccagactgaggat
tggggatacttgaatgaagatggagaactcggcttggcctaccaaggcctaaaacaagtt
gccaggttgctggaggcacaactgcaggcccagagcctggagcacgaggagcaggtggag
aaccttaaggcccaggtggaagccctgaaggaggagatggacaaacagcagcagaccttc
tgccagactctgctgctgtccccagaggcccaggtggaatttggggtccagcaggaaata
tcccggctaaccaatgagaatctggaccttaaagaactggtagaaaagctggaaaagaat
gagaggaagctcaaaaagcaactgaagatttacatgaagaaagtccaggacctagaagct
gcccaggcattggcacagagtgacaggcggcaccatgagctcaccaggcaggtcacggtc
cagaggaaggagaaggacttccagggcatgctggagtaccacaaggaagacgaggccctc
ctcatccggaacctggtaacagacctgaagccccagatgctgtcgggcacagtgccctgc
ctccccgcgtacatcctctacatgtgcgtcagatatgcagacaacaccaacgacgacctc
aaggtgcactccttgctcacctccaccatcaacggcattaagaaagtcctgaagaagcac
aacgacgactttgagatgacatcattctggttatccaacacctgtcgcctccttcattgt
ttgaagcagtacagtggggatgagggcttcatgacccagaacactgcaaagcagaatgag
cattgtcttaagaactttgacctcactgaataccgtcaggtgctgagcgacctttccatt
cagatctaccagcagctcattaaaatcgccgagggcttgttgcagccaatgatagtttct
gccatgttagaaaatgagagcattcagggtctgtctggtgtgaagccaatgggctaccgg
aagcgctcctccagcatggcggacggggataactcctactgcctggaagccatcatccgc
cagatgaattgctttcacacagtcatgtgcgaccaaggcctggaccctgagatcatcctg
caggtgttcaagcagctcttctacatgatcactgcggtgactcttaacaacctgctcctg
cggaaggacgtctgctcgtggagcacaggcatgcaactcaggtacaatataagtcaactg
gaagagtggcttcggggaaggaaccttcaccagagtggagcagcccagaccatggaacct
ctgatccaggcagcccagctcctgcagttaaagaagaaaacccgtgaggatgccgaagcc
atctgttctctgtgtacctccctcagcacccagcagattgtcaaaattttaaacctttat
acacccctgaatgaatttgaagagcgggtaacagtgtcctttatacgaacaatccaagca
caactccaagatcggaatgaccctcagcaactgttgctagactccaaacacatgtttcct
gttctgtttccatttaatccatcttccctgaccatggactcaatccacattcctgcgtgt
ctcagcctggagttcctcaatgaagtctga
DBGET
integrated database retrieval system
