Sciurus carolinensis (gray squirrel): 124965456
Help
Entry
124965456 CDS
T08117
Name
(RefSeq) oxysterol-binding protein-related protein 1 isoform X1
KO
K20174
oxysterol-binding protein-related protein 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124965456
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124965456
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
124965456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
Ank
Ank_2
Ank_4
Ank_5
Ank_3
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
124965456
NCBI-ProteinID:
XP_047382335
LinkDB
All DBs
Position
15:complement(34385797..34600990)
Genome browser
AA seq
950 aa
AA seq
DB search
MNTEAEQQLLHHARNGNTEEVRQLLESMERNEVIADINCKGRSKSNLGWTPLHLACYFGH
RQVVQDLLKAGAEVNVLNDMGDTPLHRAAFTGRKELVMLLLEYDADATVVNGSGQTAKEA
THDKEIRSMLEAVERTQQRKLEELLLAAAREGKTAELTALLNRPNPPDVNCSDQLGNTPL
HCAAYRAHKQCALKLLKSGADPNLKNKNEQKPLDLAQGAEMKHVLIGNKVIYKALKRFEG
PLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHHVYRQGCKHLTQAVCTVKSTDNCLFS
IKCFDDTIHGFKVPKNSLQQSRENWLEAIEEHSAYSTHYCSQDQLTDDEEEDAISALDLK
ESLEKAQACQQRLDREISNFLKMIMEYDMAKEMLPSFLQKVDVVSEASRETCVALSDCLN
LFTKQEGVRNFKLEQEQEKNKILSEALETLATEHHELEQSLVEGSPPLSILSEDEFYDAL
SDSESNQSLSRLEAVTARSFEEEEGHLSSRKHRMSEGKDCGGGDALSNGIKKHRTSLPSP
MFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSFSDPV
ERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHA
EGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKL
WIEQYGNVEITNHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLY
SVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFVIPGSVLLWRIAPRP
PNSAQMYNFTSFAMVLNEVDKEMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQ
RAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagaagcagaacaacagcttctccatcatgccagaaatggcaacactgaagaa
gtaagacagctgttagaatccatggagaggaatgaagtaattgctgacattaactgcaaa
ggaagaagtaagtctaatttgggctggacacctcttcatctggcatgctattttggacat
agacaagtggtccaggatctgttgaaggctggtgcagaagtgaatgtattaaatgacatg
ggagacacgccacttcatcgagctgcttttacaggacgaaaggagttggtaatgcttctc
ttagagtacgatgccgatgctacagtggtaaatgggagcggacagacagcaaaagaagct
acacatgacaaagaaatcagaagcatgcttgaagctgtagaaaggacacaacaaagaaaa
cttgaagaattacttttagcagcagcaagagaaggcaaaacagcagaactcacagctctg
ctcaacaggcctaatcctcctgatgtcaattgttcggatcagttaggaaacacaccgttg
cattgtgcagcctaccgggcccacaagcagtgtgccttaaaacttctaaaaagtggagca
gatcctaatctgaagaacaaaaatgaacagaaacctcttgaccttgcccagggtgctgag
atgaaacacgttcttattggtaataaggtcatctacaaagcattgaaacgatttgaaggc
cctctctggaagagttcaagattttttggctggagattattctgggtcgtgttagaacat
ggagtcctttcatggtataggaaacagcctgatgcagtccatcatgtttatcgccaggga
tgcaagcacctcactcaagcagtatgtacggtgaaatccactgataactgcctcttctct
attaaatgctttgatgacactattcatggcttcaaggttcctaagaatagccttcagcaa
tcaagagagaactggctagaagcaattgaagagcattctgcttatagcactcactactgt
tcccaggaccagttaactgatgatgaagaggaggatgccatttctgctctagacctgaag
gagtccttagagaaagcacaagcatgtcaacagagactagatagggaaatttccaacttt
ctcaaaatgattatggagtatgacatggctaaagaaatgctgccatcatttcttcagaaa
gttgacgttgtctctgaagcttctagagaaacttgtgtagctttgagtgattgccttaat
ctcttcactaaacaggaaggggtgaggaattttaaattggaacaggagcaagaaaaaaac
aaaattttgtcagaagcactggagactctagccactgaacatcatgaattagagcagtct
ctggtggaagggtccccacctctcagcatccttagtgaggacgagttctatgatgcgctg
tcagattccgagtccaaccagtccctgagccgattggaagcagtgacagcacgttccttt
gaagaggaggaaggtcacttgagcagtagaaaacacagaatgtctgaaggaaaggattgt
ggtggaggagatgcgctctccaatggcatcaaaaagcacagaacaagtttgccctctcct
atgttttccagaaatgacttcagtatctggagcatcctcagaaaatgtattggaatggaa
ctatccaagatcacgatgccagttatatttaatgaacctttgagtttcctacaacgactt
actgagtatatggagcatacttacctcatccacaaggccagttcattttctgatcctgtg
gaaaggatgcagtgtgtggctgcatttgctgtgtctgctgttgcttctcagtgggaacgt
actggaaagcccttcaacccgcttctgggagagacttatgaattagttcgagatgacctt
ggatttagactcatttccgaacaggtcagtcatcacccaccaatcagtgcatttcatgca
gaagggttaaacaatgattttatctttcatggctcaatctatcccaaactgaagttctgg
gggaagagtgtagaagcagaacccaaaggaaccatcacgttggagctccttgagcacaat
gaagcatatacgtggacaaatcctacctgctgtgtgcataatatcattgtgggtaaactc
tggattgagcagtacggcaatgtggaaatcacaaaccacaagactggggacaaatgtgtg
ttgaattttaagccatgtggcctttttggaaaggaattacacaaggttgaaggctacatt
caagacaaaagtaaaaagaagctctgcgctctctatgggaagtggactgagtgtctgtat
agtgttgaccctgctacttttgatgcttacaaaaagaatgataagaaaaacactgaagag
aagaagaacagcaaacagatgagcacttctgaggagtctgatgaaatgccaatgccagat
tctgaaagtgtcttcgttatccctggaagtgttctcctgtggcgaatagccccgcggcct
ccaaattctgcccagatgtataattttaccagctttgcaatggttttgaatgaagtagac
aaggaaatggagagtgtgattcctaagactgactgcaggttacggcctgacatcagagcc
atggagaatggagaaatagatcaagctagtgaagaaaaaaaacggcttgaggaaaaacaa
agagcagcccgtaaaaacaggtccaagtcggaagaagactggaagacaaggtggttccat
caaggtcctaatccctacaatggagcacaggactggatttactctggcagctactgggac
agaaactacttcaatttgcctgacatttattaa
DBGET
integrated database retrieval system
