Sciurus carolinensis (gray squirrel): 124965463
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Entry
124965463 CDS
T08117
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124965463
Membrane trafficking [BR:
ncar04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124965463
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
124965463
NCBI-ProteinID:
XP_047382354
LinkDB
All DBs
Position
15:complement(41461364..41548995)
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AA seq
1434 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSEEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIITQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVASSNEVEPMEQFSKLSQEQHRIQHNNDYS
YPKWFIPNTLKYYVLLHDISAGDEQRAESIYEEMKQKYGTQGCYLLKINSRTSNRASDEQ
IPDPWSQYLQKSSIQNQESYEDGPCTITSNKNSDSNLLSLDGLDNEVKDGLPNNFRAHPL
QLDQSSDPSNSIDGPDHVKSASSLHETKKANTGIIHGACLTLTDHDRIRQFIQEFTFRGL
LPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPE
LQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPY
PAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSAL
LLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAE
DHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVSQLSPDG
PLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEQVVAV
VNKGIIPSSFHPTQYCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVPLLLTDLSLLWKF
QPKDFSGKDNEEVKELITGEPEMIGTEVISEFLINSEESKVARLKLFPHHIGELHILGVV
YNLGTIQGSLTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSIKYGPD
RRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTF
GGNTAVLTPLSPSASENCSAYKTVVTDSTSVCTALISSASSVDFGIGIGSQPEVISVPLP
DTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIRHRILRHTAVICTSRSLN
VRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVKEFHIVQVSSSSKHWKLQNSVNL
AENKGQLASREKGKFCFKAIRCKEKEGAMQSSERYTFADIIFGNEQIVSSASPCADFFYR
SLSSELKKPQAQLSLHTEKHSTEDALRLIKKCSEVDLNIVILWKAYVVEDSKQLILEGQH
HVILRTIGKEAFSYPQKQEPPEMELLKFFRPENTAVSSRPSVDQLSNLIKTSLHYPESFN
HPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKLQLK
SQEIHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQNSMPALIIINNV
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgcgtacagtcagtgcaggagctaatcccggactccttcgttccttgtgtc
gccgcgctgtgcagcgaggaagcagagcggcttactcgtctcaatcatctcagcttcgcg
gagctgcttaagcccttttctcgcctcacttccgaggttcatatgagagatcctaataat
cagcttcacataattaaaaatttgaagatagcagtgagcaacattatcacccaaccacct
cagcctggagccattcggaagcttttgaatgatgttgtttctggcagtcagcctgcagaa
ggattagtagctaatgtgattacagcaggagattatgaccttaacatcagtgctactact
ccgtggtttgagtcttatagagagacctttcttcagtcgatgccagcatcagatcatgaa
tttctgaaccactatttagcatgtatgttggtagcatcatctaatgaagttgaacctatg
gaacagttttcaaaattgtcacaagagcagcatcgaattcagcacaacaatgattattcc
taccctaagtggtttataccaaatacgcttaaatattatgtacttttacatgatataagc
gcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatatggaact
cagggttgttatttgcttaaaattaattctcgaacgtcaaatcgagcatcagatgaacag
ataccagatccttggagtcagtatctccagaaaagtagtattcaaaaccaggaatcatat
gaagatggcccttgtactataacttcaaataagaattcagatagtaacttgctttcattg
gatggattagataacgaagtcaaagatggcttaccaaataactttagagctcacccactt
caattggaccaatccagtgacccttctaacagcattgacggaccagatcatgtaaaatct
gcctcgtcattacatgaaacaaagaaagcaaatactggaataattcatggtgcatgttta
acacttaccgatcatgatagaattcgacaatttatacaagagtttacatttcggggcctt
ttgccacatatagagaaaacaattaggcaattaaacgaccagctaatatcaagaaaaggt
ttgagtcgatctctattttctgcaactaaaaaatggtttagtggcagtaaagttccagaa
aagagcattaatgagctgaaaaatacatctgggttgctgtatccacccgaagcaccagaa
cttcaaatcaggaaaatggctgacttatgttttttggtgcagcattatgatttagcttac
agttgctatcatactgcaaagaaggattttcttaatgatcaagcaatgctgtatgcagct
ggtgccttggaaatggcagcagtgtcagcttttcttcaaccaggagcacccaggccatac
cctgctcattacatggatacagcaattcagacatacagggatatctgcaagaatatggta
ttggctgaaagatgtgtattgcttagtgctgaaattctaaaaagccaaagcaaatattca
gaggctgcagctctcctaatacggttgacaagtgaggattctgatctccgaagtgcactt
cttttggaacaggcagcacattgctttataaacatgaagagtcccatggttagaaaatac
gcatttcatatgatattggcaggccatcggtttagtaaagcaggacagaagaagcatgct
ttacgctgctattgtcaagccatgcaagtttacaaaggaaaaggctggtctcttgcggag
gatcacattaacttcactattggacgccagtcctatactctcaggcaactggacaatgct
gtgtctgcttttaggcatattttaatcaatgaaagtaaacagtctgctgctcaacaaggg
gccttccttagagaatatctttatgtttataagaatgtaagtcagctatcaccagatggt
cctttaccacagcttcctttaccgtatattaacagttcagcaacacgggttttctttggc
catgacagacgaccagcagatggtgaaaagcaagcagctactcacgtaagtctggatcaa
gaatatgactctgaatcctctcagcagtggcgagaacttgaagagcaagttgtggctgtg
gttaacaaaggaataattccatccagtttccatcccacacaatattgtttgaacagttat
tcggataactccagatttccactcgctgttgtggaagaaccaattacagtagaagtggct
tttagaaaccctttgaaggttccacttttgttgactgatttgtcattactctggaagttt
caacctaaagatttcagtggaaaggataatgaagaagttaaagaactaattacaggtgaa
cctgaaatgattggaactgaagttatttcagaattcttaattaatagtgaagaatctaaa
gtggcgagactaaagctctttccccatcacataggggagctgcatattctgggagttgtt
tataatcttggcactattcagggctccttgacagtagatggcattggtgctcttcctgga
tgtcatacaggaaagcattccttgagtatgtcagtccgagggagacaggatttagaaatt
caaggtcctcgacttaacaacacaaaagaagaaaaaacatctattaaatatggtcctgat
cgacgtttagatcctataatcactgaagaaatgccactattggaggtgttctttatacat
tttcctacagggctcctctgtggagaaatccgaaaagcatatgtagaatttgtcaatgtc
agcaaatgtcctcttactggattgaaggtcgtttctaaacgtccagaattctttactttt
ggtggtaatactgctgttctaacaccactgagcccctcagcttctgaaaattgtagtgct
tacaagactgttgtgacagactctacctctgtgtgtacagcactcatatcatcggcttct
tctgtagactttggcattggtatagggagtcagccagaggtgatatctgttccccttcct
gacactgttcttctacctggagcttcagtccagctaccaatgtggttacgtgggccagat
gaagaaggtgttcatgaaattaactttttgttttactatgaaagtgttaaaaagcaacct
aaaatacgacacagaatattaagacacactgcagttatttgtaccagccgatctttgaat
gtgcgagctactgtctgcagaagtaattctctagaagatgaagaaggcagaggaggcaat
atgctagtctttgtggatgtggaaaataccaatactagtgaagcaggtgttaaggaattc
cacatagtccaagtatcaagtagtagcaagcactggaaattacagaactctgtaaatctt
gctgaaaataaaggccaacttgccagtagggagaagggaaagttttgcttcaaagcaata
agatgtaaggaaaaagaaggtgccatgcagtcctcagaaaggtatacctttgcagatatc
atctttggaaatgaacagatagtaagttcagcaagcccatgtgcagatttcttttatcga
agtttatcctctgagttgaaaaaaccacaagctcagttgtctctgcatacggaaaaacat
tcaacagaggatgctctgagattgattaaaaaatgcagcgaggtggatttgaatattgtc
atattatggaaggcatatgttgtagaagacagtaagcagctgattttggaaggtcagcat
catgtaattcttcgcactataggaaaagaagccttttcttatcctcagaaacaggaacca
ccagaaatggaactgttaaaattcttcaggccagaaaacactgcagtttcctcaagacca
tcagtggaccagctttctaatctcattaaaacaagtcttcactacccagaatcatttaat
catccatttcatcaaaaaagcctttgtttagtgccagtcactcttttactttctaactgt
tctaaggctgatgtagacgtgatagttgatcttcggcataaaaccacaagtccagaagca
ttggaaattcatggatcattcacatggcttggacagacacaatataaacttcagcttaaa
agccaggaaattcacagtttgcagctgaaagcttgctttgttcatacaggtgtttataac
cttggaactcctagggtatttgccaagttatcggaccaagttacagtgtttgaaacaagt
cagcagaactccatgcctgctctaatcatcatcaataatgtgtga
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integrated database retrieval system
