Sciurus carolinensis (gray squirrel): 124965472
Help
Entry
124965472 CDS
T08117
Name
(RefSeq) DNA-binding protein RFX5
KO
K08061
regulatory factor X 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04612
Antigen processing and presentation
ncar05152
Tuberculosis
ncar05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
124965472
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
124965472
09163 Immune disease
05340 Primary immunodeficiency
124965472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124965472
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Other basic domains
RF-X
124965472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_DNA_bdg
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
124965472
NCBI-ProteinID:
XP_047382376
EnsemblRapid:
ENSSCRG00010011704
LinkDB
All DBs
Position
1:98233825..98242028
Genome browser
AA seq
613 aa
AA seq
DB search
MAEDEPDAKSPKTGARAPQGGTEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
KLYLYLQLPPGPSTGEKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
CESLACCRPLSTANFGKIIREIFPNIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
KAESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSA
HAHVLKAMGLGEEDEHAPRERSSKSKNGIENLEGGAHKKPERPAQSPKELETRAGPGPPA
RGERKKSVIESSAPSASNPQVNALVARLPLLLPRAPPSLVPPIRVSSPILAPKLSSGTLK
VATLPLPSRAGGPQAAVPIINMILPTVPALPGPGPGRASPGGLTQPRGTENKEVGIGGDP
GPQDKGVKRTAEVPMSEASGQDPPAKAAKQDTEDTASDAKRKRGRPRKKSGGSGERNSTP
EKSAAAMDSTQSSRLPWETWGSGGDSNSAGGSERPGAGVEAEQGTMFAQAQEDGAVSKGG
RDPSSRQAKEAEDKIPLVISKVSVIKGSRSQKEALPLVKREVDMAAQGNKDLKGHVLQSS
LTHERKDPEATPP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatgagcctgatgctaagagccccaagactggggcaagggccccccaaggt
ggtactgaggctggggaacctactacccttctccaaaggctccgaggtaccatttccaag
gccgtgcagaacaaagtagagggaatcctgcaagatgttcagaaattctcagacaacgac
aaactgtatctctaccttcagctccccccaggtcccagcactggagagaaaagctcagag
cccagcacactcagcaatgaggagtacatgtatgcctaccggtggatccgcaaccacctg
gaagagcacacggatacctgtctgccaaagcagagtgtttatgatgcctatcggaagtat
tgtgagagtcttgcctgttgccgcccactcagcacagccaacttcggcaaaatcatcaga
gagatcttccctaacatcaaggcccgaaggcttggtggtcggggtcagtccaagtattgc
tacagtggtatacgaaggaagaccttggtatctatgccacccctgcctggacttgactta
aaggctgagagtccagaaatgggtccagaagtaaccccagcacctcgggatgaactggta
gaggcagcctgtgccctaacctgtgactgggcagagcgaatcctgaaacggtccttcagt
tccatcgttgaggttgcccgcttcctgctacagcagcatctcatctctgcccgatctgca
catgcccatgtgcttaaggccatggggcttggtgaagaggatgaacatgcccctcgggaa
cgatcatctaaatccaagaatggaatagagaacctggaggggggagcccataagaaacca
gagagaccggcccagtctccaaaggagctggaaacccgggctgggcctggccctccggca
cgtggagagcggaagaagagtgtaattgagagctccgcaccatcagccagtaacccacag
gttaatgccctagtggcccggctgcctttgctccttccccgtgcccctccttcacttgtt
ccaccgatccgagtctcttcacccatcctggcccccaagctttcttcaggcaccctgaaa
gtggctacactgcccctacccagtagggctgggggaccccaggcagctgtgcctatcatt
aacatgatcttaccaacagttcctgctctgcctggacctgggcctgggcgagcttcacct
gggggactcactcagccccgaggcacagagaacaaggaggtaggcataggtggtgaccca
ggaccccaggataagggtgtcaagaggacagctgaagtacctatgagtgaggccagtggg
caggacccaccagctaaagcagcaaagcaggatacagaggatacagcaagtgatgccaaa
agaaaacgggggcgcccccgaaaaaagtcaggtggaagtggagaaagaaattccacccct
gagaagtcagccgctgccatggactctacccagtcctcgaggttaccatgggagacatgg
ggctcgggaggggacagcaactcagccggagggtcagagaggccaggagcaggggtagag
gctgagcagggaacaatgtttgcccaagcacaggaagatggtgctgtttccaaaggagga
agggatcccagttcccggcaagccaaagaagcagaagataaaattcctcttgtcatctca
aaagtgagtgtcatcaagggcagcagaagccaaaaggaggctcttccgttggtaaagcga
gaggtagacatggcagcacagggtaataaagacttaaaggggcatgtgcttcaaagttcc
ttaacccatgagcgtaaagacccagaagcaacacccccatga
DBGET
integrated database retrieval system