KEGG   Sciurus carolinensis (gray squirrel): 124965472
Entry
124965472         CDS       T08117                                 
Name
(RefSeq) DNA-binding protein RFX5
  KO
K08061  regulatory factor X 5
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04612  Antigen processing and presentation
ncar05152  Tuberculosis
ncar05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09150 Organismal Systems
  09151 Immune system
   04612 Antigen processing and presentation
    124965472
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    124965472
  09163 Immune disease
   05340 Primary immunodeficiency
    124965472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124965472
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Other basic domains
   RF-X
    124965472
SSDB
Motif
Pfam: RFX5_DNA_bdg RFX5_N RFX_DNA_binding Pox_D5
Other DBs
NCBI-GeneID: 124965472
NCBI-ProteinID: XP_047382376
EnsemblRapid: ENSSCRG00010011704
LinkDB
Position
1:98233825..98242028
AA seq 613 aa
MAEDEPDAKSPKTGARAPQGGTEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
KLYLYLQLPPGPSTGEKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
CESLACCRPLSTANFGKIIREIFPNIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
KAESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSA
HAHVLKAMGLGEEDEHAPRERSSKSKNGIENLEGGAHKKPERPAQSPKELETRAGPGPPA
RGERKKSVIESSAPSASNPQVNALVARLPLLLPRAPPSLVPPIRVSSPILAPKLSSGTLK
VATLPLPSRAGGPQAAVPIINMILPTVPALPGPGPGRASPGGLTQPRGTENKEVGIGGDP
GPQDKGVKRTAEVPMSEASGQDPPAKAAKQDTEDTASDAKRKRGRPRKKSGGSGERNSTP
EKSAAAMDSTQSSRLPWETWGSGGDSNSAGGSERPGAGVEAEQGTMFAQAQEDGAVSKGG
RDPSSRQAKEAEDKIPLVISKVSVIKGSRSQKEALPLVKREVDMAAQGNKDLKGHVLQSS
LTHERKDPEATPP
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggcagaagatgagcctgatgctaagagccccaagactggggcaagggccccccaaggt
ggtactgaggctggggaacctactacccttctccaaaggctccgaggtaccatttccaag
gccgtgcagaacaaagtagagggaatcctgcaagatgttcagaaattctcagacaacgac
aaactgtatctctaccttcagctccccccaggtcccagcactggagagaaaagctcagag
cccagcacactcagcaatgaggagtacatgtatgcctaccggtggatccgcaaccacctg
gaagagcacacggatacctgtctgccaaagcagagtgtttatgatgcctatcggaagtat
tgtgagagtcttgcctgttgccgcccactcagcacagccaacttcggcaaaatcatcaga
gagatcttccctaacatcaaggcccgaaggcttggtggtcggggtcagtccaagtattgc
tacagtggtatacgaaggaagaccttggtatctatgccacccctgcctggacttgactta
aaggctgagagtccagaaatgggtccagaagtaaccccagcacctcgggatgaactggta
gaggcagcctgtgccctaacctgtgactgggcagagcgaatcctgaaacggtccttcagt
tccatcgttgaggttgcccgcttcctgctacagcagcatctcatctctgcccgatctgca
catgcccatgtgcttaaggccatggggcttggtgaagaggatgaacatgcccctcgggaa
cgatcatctaaatccaagaatggaatagagaacctggaggggggagcccataagaaacca
gagagaccggcccagtctccaaaggagctggaaacccgggctgggcctggccctccggca
cgtggagagcggaagaagagtgtaattgagagctccgcaccatcagccagtaacccacag
gttaatgccctagtggcccggctgcctttgctccttccccgtgcccctccttcacttgtt
ccaccgatccgagtctcttcacccatcctggcccccaagctttcttcaggcaccctgaaa
gtggctacactgcccctacccagtagggctgggggaccccaggcagctgtgcctatcatt
aacatgatcttaccaacagttcctgctctgcctggacctgggcctgggcgagcttcacct
gggggactcactcagccccgaggcacagagaacaaggaggtaggcataggtggtgaccca
ggaccccaggataagggtgtcaagaggacagctgaagtacctatgagtgaggccagtggg
caggacccaccagctaaagcagcaaagcaggatacagaggatacagcaagtgatgccaaa
agaaaacgggggcgcccccgaaaaaagtcaggtggaagtggagaaagaaattccacccct
gagaagtcagccgctgccatggactctacccagtcctcgaggttaccatgggagacatgg
ggctcgggaggggacagcaactcagccggagggtcagagaggccaggagcaggggtagag
gctgagcagggaacaatgtttgcccaagcacaggaagatggtgctgtttccaaaggagga
agggatcccagttcccggcaagccaaagaagcagaagataaaattcctcttgtcatctca
aaagtgagtgtcatcaagggcagcagaagccaaaaggaggctcttccgttggtaaagcga
gaggtagacatggcagcacagggtaataaagacttaaaggggcatgtgcttcaaagttcc
ttaacccatgagcgtaaagacccagaagcaacacccccatga

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