Sciurus carolinensis (gray squirrel): 124965505
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Entry
124965505 CDS
T08117
Name
(RefSeq) contactin-associated protein-like 3 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124965505
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
124965505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
EGF_2
Motif
Other DBs
NCBI-GeneID:
124965505
NCBI-ProteinID:
XP_047382445
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All DBs
Position
15:20925757..21139850
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AA seq
1313 aa
AA seq
DB search
MDPVAGALLRMLALLSAQTCSTVVAGNTYNCDAPLSSALSRASFSSSSELSSSHGPGFAS
LNRRDGAGGWTPFVSDKYQWLQIDLGERMKVTAVATQGGYGSSDWVTSYLLMFSDSGRNW
KQYRREESFLGFPGNTNSDSVVHYRLQPPLEARFLRFLPLAWNPKGRIGMRIEVYGCAYR
SEMVNFDGKSFLLYTINQKSMNPVKEIITLKFKTTQSDGILLHREGQNGKHITLELVKGK
LILFLNSGDANLPSPDAQATLTLGSLLDDQHWHSVLIELLNTHINFTVDKHTHHFQADGE
TSLLDLDYKISFGGIPRHGKSMVLPHKSFHGCFENLFYNGVDIIDLSKKHKPEILIMGNV
SFSCLHPQTVPVTFLSSRSYLALPHPSGVNSLAISFQFRTWNRAGLLLTSQFLHRSGALV
LVLSDGKLKLSLCPPSQPVRAITAGAGLNDGQWHSVSLSAKGNHWSLKVDSNASSAAHSL
RGWVDSADTYYFGGYPDNSSGSGCESPLGGFQGCLRLMSIGGTAVDPILVQQGVLGSFSD
LQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCAHTGYAGATCHSSLYERSCEAYKHRG
NSSGLYYIDLDGSGPLGPALVYCNMTDSAWTSVQHNGSHLSRVKSSRGESPQPVIFKYMA
SMDQLQALIDQADHCQQDLVFHCKKSRLTLTHLDGTPVSWWVGRTNETHTYWGGSLPDAQ
KCTCGLEGNCIDSQYHCNCDADRDEWTSDTGVLSHKEHLPVTQVVMTDAGRPHSEAAYTL
GPLLCQGDNSFWNSASFNTETSYLHFPTFRGELSADVSFFFKTTASSGVFVENLGITDFI
RLELRAPTEVTFSFDVGNGPCEVKVWSPTPFNDNRWHHVRAERNVKEASLQVDQLPQKFQ
PAPTGGHRRLQLNSQLFIGGTASRQRGFLGCIRSLQLNGMALDLEERAKVTPGVEPGCSG
HCSSYGHLCLNGGRCRERHRGVACDCASSAYEGPFCSHEISAYFGAGSSVIYSFQEHHNY
TFNGNSSSLAALFHEELTLTREIATLSFRTTGTPSLLLYVSSFYEEYLSVILAPNGSLQI
RYKLDRHKEPDVFNFDFKNLADGQLHNVKINREAAVVFVEVNEDARRQATLSSGTEFNAV
KSLVLGMILEPQGADPDTRRAAARGFTGCLSAVRFGRAAPLKAALRPGGPARVTVHGQVA
AGSNCAIGAGPGSGTRELAPRLSGGTGHSGPTDGGEPLINTNRSDSAVIGGVVAVVIFIL
LCVTAIAIRIYQQRWLYQKNKSDISKAGDNAETLKSELNMQNTISESQKEYFF
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggaccctgtggccggagccttgctcaggatgcttgctcttttgtctgcgcagacctgc
agcacagtggtggcggggaatacttacaactgtgatgctccgctgtcttctgccttgtcc
cgggcatccttcagcagctcctcagagctgtccagcagccatggccctgggtttgcaagt
ctaaatcggagagatggagctggtggctggactccatttgtatcagataaataccagtgg
ctgcagattgaccttggagagagaatgaaggtcacggctgtggccacccagggaggatat
gggagctccgactgggtgaccagctacctcctgatgttcagtgacagtgggaggaactgg
aaacagtatcgaagagaagaaagcttcttgggttttccaggaaacacaaactcagacagc
gtggtgcactacagactccaacctcccttggaagccaggttcctgcgcttccttccttta
gcctggaaccccaaaggcaggattggcatgcggattgaagtgtatggatgtgcatacaga
tctgagatggttaattttgatggaaaaagtttcttgttgtatacaattaatcagaaatcc
atgaatccagtgaaggagattattactttgaaatttaaaaccacgcagagtgatgggatt
ctactccacagagaaggacaaaatggcaaacatatcaccctggaattagttaaaggaaaa
ctcatcttgttccttaattcaggtgatgctaacctgccctcccctgatgcccaggcgacc
ctcaccttgggcagcctgctggatgaccagcactggcattctgtcctcattgaactcctc
aacacacacatcaacttcacagtggacaaacacactcaccatttccaggcagatggagag
accagccttttagatcttgattataagatcagctttggaggaattcctagacatggaaaa
tcaatggtgctcccacacaaaagctttcatgggtgttttgaaaatctcttttataatgga
gtggatatcatcgatttgtccaagaaacacaaaccagagatactcatcatgggaaatgtg
tccttctcctgtttacatcctcaaaccgtccctgtgacttttctgagctcaaggagttat
ttggctctgcctcacccctcaggagtgaactctctggccatctctttccaatttcgaaca
tggaacagagcggggctgttgttgacaagtcagtttctacaccggtcaggggctcttgtc
cttgttcttagtgatgggaaactcaagttgagcctgtgcccacctagccagccagtgaga
gccatcacagcaggtgctggattaaatgatggtcaatggcattctgtgtccttgtctgct
aaagggaatcactggagcctgaaggtggatagcaatgcatcctctgctgcccattcccta
cgtgggtgggttgattctgctgatacctattattttgggggctatcctgacaacagttct
ggttctggatgtgaaagtcccctgggagggtttcagggctgtctgaggctcatgtccatt
ggtggcacagcggtggatcctatcttggtacagcaaggggtgctggggagcttcagcgac
ctgcagatagactcctgtggcatcacagacaggtgtttgcccagctactgtgaacacggg
ggtgaatgttcccagtcctgggacaccttctcctgtgactgcgctcacactggctacgcg
ggagccacctgccattcctctttgtacgagcggtcctgtgaagcctacaagcacagagga
aactcttcaggcctctactatattgacttagatggaagtggccctctgggaccagctctt
gtgtactgtaacatgacagactctgcatggacttcggtgcagcacaatggctcccacctg
tccagagtcaaaagctctcgtggagaaagcccacagcctgtgattttcaagtacatggcc
agcatggaccaactccaggccctaattgaccaggcggaccactgccaacaggacctggtt
ttccactgcaagaagtcaaggctcaccttgactcaccttgatggaaccccagtgagctgg
tgggttggaagaaccaatgaaacacacacttactggggaggttctctgcctgatgctcaa
aagtgtacttgtggattagaggggaactgcattgattctcaatatcactgcaactgtgat
gctgaccgggatgaatggaccagtgacactggagtcctttcccataaggagcacttgcca
gtcactcaggttgtgatgacagatgcaggccggccacactctgaagcagcttataccctg
gggcctctgctctgccaaggggacaattcgttttggaattcagcttccttcaatactgag
acttcgtatcttcatttccctacattccgtggagagctcagtgctgatgtgtccttcttt
tttaagacaacagcttcttctggggtgtttgtagagaacctgggcattacagactttatc
aggctagagctgcgcgctcccacagaagtgaccttttcctttgatgtggggaatggtcct
tgtgaggtcaaagtatggtcacccaccccctttaatgacaaccgctggcaccatgtaagg
gctgaaaggaatgttaaagaagcatctctccaagtggatcagctccctcaaaagtttcag
cctgcccccactggtgggcaccgccgcttgcagctcaacagccagcttttcattggtgga
acggccagcaggcagaggggctttctggggtgcattcggtccctgcagttgaacgggatg
gctctggacctggaggaaagagccaaggtgacaccaggagtggagccagggtgttcagga
cactgcagcagctatggacacttgtgtctcaatggtgggagatgccgagaaaggcacaga
ggggtggcttgtgattgtgcctcctctgcctatgagggcccattctgctcacatgagatt
tctgcctattttggagctggttcctcggtgatctacagttttcaagagcatcacaactac
accttcaatggaaactccagctccttggcagctttatttcatgaggagctaacactaacc
agggaaatagccaccttgagcttccgaactacagggactcccagcctactgctgtatgtg
agctccttctacgaggagtacctttcagttatccttgctccaaatggaagtttgcagatc
aggtataagctagacagacacaaagagccagatgtttttaactttgattttaaaaatctg
gctgatgggcaacttcacaatgtgaagattaacagagaagctgcagtggtctttgtagag
gttaatgaggatgcaaggagacaagccaccctgtcgtcaggaacagaattcaatgctgtc
aaatcccttgtgttggggatgattttagagccccagggcgcggacccggacacgcggcgg
gcggctgcgcgcggcttcactggctgcctctctgcggtgcgctttggccgcgcagccccg
ctcaaggcggcgctgcgtcccggcggacccgcccgggtcactgtgcacggtcaggtggcc
gccggatccaactgtgcgatcggagcagggccaggctccggaacacgggaactagctccc
cgactctcaggtggcacaggccattctggaccaactgatgggggagaacccttaattaat
acaaacagaagtgactctgcggtcatcggaggtgtggtagccgtggtgatatttatcttg
ctctgtgtcactgccatagccatacgcatttatcaacagagatggttatatcaaaagaat
aagtcagatatctcaaaagctggagacaatgctgagactctgaaaagtgagctcaacatg
caaaataccatcagtgaaagtcagaaggagtacttcttctga
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