Sciurus carolinensis (gray squirrel): 124965531
Help
Entry
124965531 CDS
T08117
Name
(RefSeq) netrin receptor DCC
KO
K06765
deleted in colorectal carcinoma
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
ncar05200
Pathways in cancer
ncar05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124965531
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124965531
09162 Cancer: specific types
05210 Colorectal cancer
124965531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124965531
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124965531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Interfer-bind
Ig_4
Sp38
V-set_CD47
Protocadherin
EphA2_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
124965531
NCBI-ProteinID:
XP_047382504
LinkDB
All DBs
Position
15:59395817..60506310
Genome browser
AA seq
1447 aa
AA seq
DB search
MENSLGCVWVPKLAFVLFGASLLSAHLQVTGFQIKAFTSLRFLSEPADAVTMRGGNVLLN
CSAESDRGVPVIKWKKDGIHLALGMDERKQQLPNGSLLIQNILHSRHHKPDEGLYQCEAS
LGESGSIISRIAKVAVAGPLRFLSQTESVTAFMGDTVLLKCEVIGEPMPTIHWQKNQQDL
TPMPGDSRVVVLPSGALQISRLQPGDIGIYRCTARNPASSRTGNEAEVRILSDPGLHRQL
YFLQRPSNVVATEGRDAVLECCVSGYPPPSFTWLRGQEVIQLRSKKYSLLGGSNLLISNV
TDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKPVP
TVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQTSAQLIVPKP
AMPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALNTT
QPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPELQVPGPVENLQAVSTS
PTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEVDGLSYKLEGLKKFTEYTLRFLA
YNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKI
RHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWHTAETPENDL
DESQVPDQPSSLHVRPQTNCIIMSWTPPLNPNIVVRGYIIGYGVGSPYAETVRVDSKQRY
YSIERLESSSHYVISLKAFNNAGEGVPLYESATTRSITDPTDPVDYYPLLDDFPTSVPDV
STPMLPPVGVQAVALTHEAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT
TSLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEAAPTSAPKDLTVITREGKP
RAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYF
RIQARNAKGVGPLSDPILFRTLKVEHPDKMANDQGRHGDGSYWPVDTNLIDRSTLNEPPI
GQMHPPHGSVTPQKNSNLLVIIVVTVGGITVLVVVIVAVICTRRSSAQQRKKRATHSVGK
RKGSQKDLRPPDLWIHHEEMEMKNIEKPSGTDPAGRDSPIQSCQDLTPVSHSQSETQLGS
KSTSHSGQDTEEAGSSMSTLERSLAARRATRAKLMIPMEAQSNNPAVVSAIPVPTLESAQ
YPGILPSPTCGYPHPQFTLRPVPFPTLSVDRGFGAGRSQSVSEGPTTQQAPMLPPAQPEH
PSSEEAPSRTIPTACVRPTHPLRSFANPLLPPPMSAIEPKVPYTPLLSQPGPTLPKTHVK
TASLGLAGKARSPLLPVSVPTAPEVSEESHKPAEDPANVYEQDDLSEQMASLEGLMKQLN
AITGSAF
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggagaatagtcttggatgtgtttgggtacccaagctggcttttgtactcttcggagct
tccctgctcagcgcgcatcttcaagtcaccggttttcaaattaaagctttcacatccctg
cgcttcctatcagaacctgctgatgctgtcacaatgcggggaggaaatgttctcctgaac
tgctccgcagagtctgaccgaggagtcccagttatcaagtggaagaaagatggcatccac
ctagccttgggaatggatgaaaggaagcagcagcttcccaatggatctctgttgatacaa
aacatacttcattccagacaccacaagccagatgagggactttaccaatgtgaagcgtct
ttgggagagtctgggtcaattattagtcggatagcaaaagtcgcagtagcaggaccactg
agattcctttcccagacagaatctgtcaccgccttcatgggagacacagtgctactcaag
tgtgaagtcattggggagcccatgccaacaatacactggcagaaaaatcaacaagacctc
actccaatgccgggagactccagggtggtggtcttgccttctggagcattgcaaatcagc
agacttcaaccgggggacattgggatctaccgatgcacagcccggaatccagccagctca
agaacaggaaatgaagcagaagtcaggattttatcagatccaggactgcataggcaactg
tattttctgcagaggccatccaacgtggtggccactgaaggaagggatgccgtcttggag
tgctgtgtgtccggctaccctccgcccagtttcacctggttacggggtcaggaagtcatc
caactcaggtctaaaaagtattctttattgggtggaagcaacttgctgatctccaacgtg
acagatgacgacagtggaacgtacacctgtgttgtcacatataaaaatgagaacattagt
gcctctgcagagctcacagtcttggttccgccatggtttttaaatcacccttccaacctc
tatgcctatgaaagcatggatattgagtttgaatgtgcagtctctggaaagcctgtgccc
actgtgaattggatgaagaatggagatgtggtcatacctagtgattattttcagatagtg
ggaggaagcaacttacggatccttggtgtggtgaagtcggatgaaggcttttatcaatgt
gtggctgaaaacgaggctggcaatgctcaaaccagtgcgcagctcatcgtccccaagcct
gccatgccaagctccagtgtcctcccatccgctcccagagacgtggttcctgtcttggtc
tctagtcgctttgtccgtctcagctggcgtccacctgcagaagcaaaaggaaacattcag
actttcacggtcttcttctccagagagggtgataacagggaacgagcattgaatacaact
cagcccgggtcccttcagcttaccgtgggaaacctgaagccagaagccatgtacaccttc
cgagttgttgcctacaatgagtgggggccaggggagagttctcaacccatcaaggtggcc
actcagcctgagttgcaagttccagggccagtagaaaacctgcaagctgtatctacctca
cctacctcaattctaattacctgggaaccccctgcctatgcaaatggtccagtccaaggt
tacagattattctgcactgaggtgtccacagggaaagaacagaatatagaggttgatgga
ctctcttataaactggaaggcttgaaaaaattcacggaatatactcttcgattcttagct
tataatcgctatggaccaggagtgtctactgacgatatcacagtggttacgctttctgac
gtgccaagtgccccacctcagaacgtctcactggaagtggttaattcaaggagtatcaaa
gtaagctggcttcctcctccatcagggacacagaatggatttattactggctataaaatt
cgacacagaaagacaacccgcaggggtgagatggaaacactggagccaaacaatctctgg
tacctgttcacaggcctggagaagggaagtcagtacagtttccaagtatcagccatgacg
gtcaatggcactggaccaccttccaactggcatacagcagagaccccagagaatgatcta
gatgagtctcaagtccctgaccagccaagctcacttcatgtgaggccacagaccaactgc
atcatcatgagctggactcctcccttgaacccaaacattgtggtgcgaggttacatcatc
gggtacggcgtcgggagtccttatgctgagaccgtgcgtgtggacagcaagcaacgatac
tattccattgagcggttagagtcaagttcgcattatgtaatctccctaaaagcttttaac
aatgcaggagaaggcgtgcctctctatgaaagtgccaccaccagatcgataacagacccc
actgaccccgttgattattatcctttgcttgatgatttccccacctcggtcccagatgtc
tccacccccatgctcccaccagtaggtgtacaggctgtggccctgacccacgaggccgtg
agggtcagctgggcagacaactctgtccctaagaaccaaaaaacatccgaggtgcgtctt
tacactgtccggtggagaaccagcttttctgcgagtgccaaatacaagtcagaagacaca
acatcactcagctacacagcaacaggcctcaaaccaaacacaatgtatgagttctcagtc
atggtaacaaaaaacagaaggtccagcacatggagtatgactgctcacgctactacatat
gaagcagccccgacctctgctcccaaggatttgacagtcatcactcgggaagggaagcct
cgtgctgtcattgtgagctggcaacctcccttggaagccaatgggaaaattactgcttac
atcttgttttatactttggacaagaacatacccatcgatgactggattatggaaacaatc
agcggtgaccggcttactcatcaaatcatggatctcaacctggacactatgtactacttc
cgaattcaagcacgaaatgcaaaaggcgtggggcccctctctgatcccatcctcttccgg
actctgaaagtggaacaccctgacaaaatggctaatgaccaaggtcgccatggagatgga
agttactggccagttgatactaatttgattgacagaagcactctcaatgagccacccatt
gggcagatgcacccaccacatggcagtgtcaccccccagaagaacagcaacctgcttgtg
atcatcgtggtcaccgtgggtggcatcacagtgctggtggtggtgatcgtggctgtgatc
tgcacccgtcgctcttcagcccagcagaggaagaagcgggccacccacagcgtgggcaaa
aggaagggcagtcagaaggacctcagaccccctgacctttggattcatcatgaagaaatg
gagatgaaaaatattgagaagccatcaggaactgaccctgcaggaagggactcccccatc
cagagctgccaagacctcacacccgtcagccacagccagtcagaaacccaactgggcagc
aagagcacctctcattcaggtcaagacaccgaggaagcagggagctccatgtccactctg
gagaggtcactggctgcccgccgagccactcgagccaaactcatgatccccatggaggcc
caatccaacaatcctgctgtcgtgagtgccatccctgtgccaaccctagaaagtgcccag
tacccaggaatcctcccatctcccacgtgtggatacccccacccacagttcactctccgg
cctgttccattcccaacgctgtcagtggaccgaggttttggagcaggaagaagtcagtca
gtgagtgagggaccaaccacacagcaggcacccatgctgcccccagctcagcctgagcat
cccagcagtgaggaagcaccaagcagaaccatccccacagcctgtgttcgaccaactcat
ccgctgcgcagctttgctaaccctttgctacctccaccaatgagtgcaatagaaccgaaa
gtcccttacacaccacttttgtctcagccagggcctactcttcccaagactcatgttaaa
acagcctctcttgggctggctggaaaagcaagatcccctttgcttcctgtgtctgtgcca
acagctcctgaagtatctgaggagagccacaaaccagctgaggatccagctaacgtgtat
gagcaggatgatctgagtgaacaaatggcaagcttagaagggctaatgaagcaacttaat
gccatcacaggctcagccttctaa
DBGET
integrated database retrieval system
