Sciurus carolinensis (gray squirrel): 124965573
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Entry
124965573 CDS
T08117
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03082
ATP-dependent chromatin remodeling
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124965573
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124965573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124965573
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124965573
GBAF(ncBAF) complex
124965573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
124965573
NCBI-ProteinID:
XP_047382567
LinkDB
All DBs
Position
15:complement(36078604..36156816)
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGVMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcgttcgcagccccgcggcagcgaggcaagggggagatcacacccgccgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacttcagagtgttctcagtatcagcagatgttgcatacaaacttggtatac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagtgatgaatcagagcggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccatggttccatg
ggaggttacaaccattctgtgccatcatcacagagcatgccagtacagaatcagatgaca
atgagtcaagggcaaccaatgggaaactacggcccccgaccaaatatgaatatgcaacca
aaccaaggaccaatgatgcatcagcagcccccttctcagcaatacaatatgccacaggga
ggtgggcagcattaccaaggacagcagccacctatgggaatgatgggtcaagttaaccag
ggcaatcatatgatgggtcagagacagattcctccctatagaccacctcagcagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacaatatggccaacaacaggatgcttaccagggaccccct
ccacaacaaggatatccccctcagcagcagcagtacccagggcagcagggctatccagga
cagcagcagggctatggtccttcacagggtggtccaggtcctcagtatcctaactatcca
cagggacaaggtcagcagtatgggggatatagaccaacacagcctggaccaccccaacca
ccccagcagaggccttatggatatgaccagggacagtatggaaattaccagcagtga
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