Sciurus carolinensis (gray squirrel): 124965602
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Entry
124965602 CDS
T08117
Name
(RefSeq) guanylate-binding protein 4-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124965602
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Phlebovirus_NSM
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
124965602
NCBI-ProteinID:
XP_047382603
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Position
1:133328214..133344466
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AA seq
638 aa
AA seq
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MASESIMKAPICLVENTNEQLTVNSKALRILDKICQPVVVVAIVGKFRTGKSYLMNQLAG
QNHGFPLGSTVKAVTKGIWMWCVPHPTKPDHTLVLLDTEGLGDVEKGDSKNDNWIFALAV
LLSSTFVYNSMGTIDHQALEQLHYVTELTQLIRAKSDPTPDEVEDSTEFVSFFPDFVWTV
RDFALELKLDGHPLTEDEYLENALKLISGENQKIQNSNMSRECIRYFFPKRKCFVFDRPT
NDRNLLFHIDKVSQNQLERTFVVQSKNFCTYVYTNAKTKTLRGGIVVTGNRLGTLVETYV
NAISKGTIPCLENAVTTLAQCENSAALQKAANHYSEQMAQRVEFPTDTLQELLEVHTACE
REAIAVFMEHSFKDDKHEFQKKLVDTIERKKEAFLLQNEETSVKYCQAQLEQLSETLMQS
ITRGEFSVPGGHSLYLEAKKMVEQHYKLVPKKGVKAKEVLQSFLQSQSAIEKFILQSDKA
LTDGEKAIAAERAKREAAEEEQELLRQQQKEQQERMEAQKTSFQENMMQLKEKLEREFEN
LLREQERVLQHKLKIQEELLMEGFKEKAQRLYKEINRLKEEIETSKRNTPWMMSQVLATA
GPILLQVLPGPTKIIGAGIIVSTTILALIEAFQKGIMK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaatctattatgaaggcccccatttgtttagtggaaaacacgaatgagcag
ctgacagtgaattcaaaagccttaaggattcttgacaagatatgtcaacctgtggtggtg
gtggccattgtagggaagtttcgtacggggaaatcctacctgatgaatcaacttgcagga
cagaaccatggtttccctctgggctccacagtgaaggctgtaaccaagggcatctggatg
tggtgtgtgccccaccccaccaagccagaccacaccctggtcctcctggacactgagggc
ctgggtgatgtggaaaagggtgactctaagaatgacaactggatctttgccctggctgtg
cttctcagcagcacctttgtctacaacagcatgggtaccatagaccaccaggccctggag
cagttacactatgtgactgaactcacacaactaatcagggcaaaatctgaccccacacct
gatgaagtagaggattccaccgagttcgttagtttctttccagactttgtttggactgtg
cgagatttcgcactggagctgaagttggatggacaccccctcacagaagatgagtacctg
gagaatgccttgaagctaatttcaggagagaatcagaaaatccaaaattccaacatgtct
agagagtgtatcagatatttctttccaaaacgaaagtgctttgtctttgaccggcctacg
aatgacagaaacctattattccatattgataaagtttcacaaaatcaactggaaaggact
tttgtggtgcagtcaaaaaacttctgtacctatgtctacaccaatgccaaaaccaagacc
ctgagagggggaatcgttgtcactggaaatcggttggggactctggtggaaacctatgta
aacgccatcagcaaaggaaccattccttgtttggagaacgcggtgaccactctggcccag
tgtgagaactcggcagccctgcagaaggcagccaaccactacagtgagcagatggcccag
cgagtggagttccccacagacactctccaggagctgctggaggtgcacacagcctgtgag
agggaagccatcgcagtcttcatggagcactccttcaaggacgacaagcatgagttccag
aagaagcttgttgacacaatagagagaaagaaggaagctttcttgctgcagaatgaagag
acatctgtcaaatactgccaggctcagctggaacagctttcagagaccctaatgcaaagc
attacaagaggagagttctctgttcctggaggccacagtctctacttagaagccaagaag
atggtggaacagcattacaagctggtgccaaagaaaggagtaaaggcaaaggaggtcctt
cagagcttcctgcagtcacagtctgccatagaaaaattcattctgcagtcagataaagcc
ctcactgatggagagaaggccatagcagctgagcgagccaagagggaggcagccgaggag
gaacaggagctgctaagacagcagcagaaagagcagcaagaaaggatggaggcccaaaag
acaagcttccaggaaaacatgatgcagcttaaagagaagctagagagagaatttgagaac
ttactgagagagcaggaaagagtgctgcagcacaagctgaagatccaagaagaactgctt
atggagggatttaaagagaaagctcagaggttatataaagagataaatcgactaaaagaa
gagattgaaacatctaaaaggaatacaccctggatgatgtcacaggtgcttgctacagct
ggccctattttgcttcaagtactccctgggcctacaaaaataatcggtgcagggatcata
gtaagcactactattttagctttgattgaggcctttcagaaaggaattatgaaatga
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