Sciurus carolinensis (gray squirrel): 124965638
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Entry
124965638 CDS
T08117
Name
(RefSeq) contactin-associated protein-like 3 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124965638
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
124965638
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
EGF_2
Fibrinogen_C
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
124965638
NCBI-ProteinID:
XP_047382677
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Position
15:complement(7454885..7669764)
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AA seq
1305 aa
AA seq
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MASATRAFLQVLLLLPPQTWSPAAAGNPRDCDAPLGSTLPPSSFSSSSVLSSSHGPGFAR
LNRRDGAGGWTPLVSNKYQWLQIDLGERMEITAVATQGGYGSSDWVTSYLLMFSDSGRNW
KQYRREESIWGFSGNTNADSVVHYRLQPPFEARFLRFLPSAWNPKGRIGMRIEVYGCAYR
SQVAYFDGRSALLYRLDKKPLRPIREIISLKFKTMQNNGILLHREGQHGNHVSLQIIKGK
LVFALHSGNANPLPAGAPVTLTLGSLLDDQHWHSVLIERLSTHVNFTLDKHTRQFRAKGE
SGSLDLNSEISFGGIPTSTGSLAISHKNFHGCVENLYYNGVDIIELAKKHKPQVFIMGNV
SFSCPQPQTVPVTFLSPWSYLALPGNSGEDKMSVTFQFRTWNQAGRLLFGELWHGSGSFV
LFLEDGKLRLSLLQPGQPLRNVTAGAGLNDGQWHSVSLSAKWSHLSVAVNGDTVLQPLVT
GLTGSSNTYYFGGCPDNSTGSGCESPVGGFQGCLRLISIGGTAVDPISVQQGALGSFSDL
QIDACSITDRCLPSFCEHGGACSQSWDTFSCNCEGTGYTGGTCHSPLYEQSCEAHKHRGR
PSGLYYVDADGSGPLEPFLVYCNMTADAAWTVVRHGGPDQVTVGGGPRGHAGSVTFAYAA
SVGQLRAAVALAERCEQQLALRCGSGPRSAARDGTPLSWWAGRTNETHTYWGGSLPDAQK
CTCGLQGNCIDSQYYCSCDTDQDQWTSDIIVLAHKEHLPVTQLAMTDRGRPHSEAVYTLG
PLLCQGDKSFWNSASFNTETSYLHFPTFHGELTADVRFFFKTTVPSGVFMENLGITDFIR
IELQSPTEVTFSFDVGNGPCEVTVQSPTPFNDNRWHHVRAERNVKGASLQVDQLPQKTQA
APTDGHVRLQLNSQLFIGGTASRQRGFLGCIRSLQLNGVALDLEDRATVTPGVEPGCVGH
CSSYGHLCRNGGRCRERPRGVACDCAPSAYEGPFCVHEISAYFETGSSVTYNFQDHHPLS
GNASSLASSFHREVTLSRETITLSFRTTWAPSLLLYVSSLYEEYLSVILANNGSLQVRYK
LDRHQDPDVFNFDFKNMADGHLHQLKIDREEAVVFVEVNQSAQRQVILSSGTEFNAIHSL
TLGKVLEPPGADPDTRRAAARGFTGCLSAVRFGRAAPLKALRPGGPARVTVRGHVAAGAR
CAAGAQPGDGARELAPRRAGGAGGAGHPEPNEEGEPLVNANRSDSGVIGAPQEMLGVRIP
LKTQFSKTEVGMVAHVGDPSYSGGRGRTMVGSRPAWATEQDPASK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccacccgcgccttcctccaggtgctgctgctgttgcctccgcagacttgg
agcccggcggcagcggggaatccacgcgattgtgatgctccactgggatcgaccttgcct
ccctcctccttcagcagctcctcggtgctgtccagcagccatggccctgggttcgcgagg
cttaatcggagagatggagctggtggctggaccccacttgtgtccaataaataccagtgg
ctgcagattgaccttggagagagaatggagatcacagcggtggccacccagggtggatat
gggagctccgactgggtgaccagttacctcctgatgttcagtgacagcggaaggaactgg
aagcaatatcgacgagaagaaagcatctggggattttcaggaaacacaaacgcggacagc
gtggtgcactaccgcctccagccccccttcgaagccaggttcctgcgcttcctgccttca
gcctggaaccccaagggcaggattgggatgcggatcgaggtgtatgggtgtgcatacaga
tctcaggtggcttattttgatggacgaagtgccctgctgtacagattggataaaaaaccc
ttaagacccataagagagattatttctttgaaatttaaaaccatgcagaacaatgggatt
ctactccacagagaaggacaacatggaaatcatgtatctctgcaaataattaaaggaaaa
cttgtctttgctcttcattcaggcaatgccaacccactgcctgcaggtgcccccgtgacc
ctcaccctgggcagcctgctggatgaccagcactggcactccgtcctcattgagcgcctc
agcacgcatgtcaactttacgctggacaaacacactcggcagttccgtgcaaagggagaa
tccggttccttggatcttaactctgagatcagctttggaggaattccgacatctacaggc
tccctggcaatctcacataaaaactttcatggatgtgtagaaaacctttattataatgga
gtggatattattgaattagccaagaaacacaaaccacaggtcttcattatgggaaatgtg
tccttctcatgtccacaaccacagaccgtccctgtcacttttctgagcccttggagttat
ctggctctgccaggcaactctggggaggacaagatgtctgtcactttccagtttcgaaca
tggaaccaggcaggacgattgctttttggtgaactgtggcatggttctggaagttttgtc
ctctttcttgaggatggaaaactcagactgagcctcctccagccaggacagccgttgagg
aacgtcacagcaggtgctgggctgaatgacgggcagtggcactctgtgtccctgtctgct
aaatggagccatctgagtgtggccgtgaacggtgacacggttctccagcccctggtgact
ggcctgacgggttccagcaacacctattattttggaggctgtccggacaacagcacaggc
tctggatgtgaaagtcctgtgggagggtttcagggctgcctgaggctcatctccattggt
ggcacagcggtggatcccatctcagtccagcagggggcgctggggagtttcagcgacctc
cagatagacgcctgcagcatcacagacaggtgcctacccagcttctgtgaacacgggggt
gcatgttcccagtcctgggacaccttctcttgcaactgcgagggcacaggttataccgga
gggacctgccattccccgctctacgagcagtcctgtgaggcccacaagcacagagggcgt
ccttctgggctttactacgttgatgctgatggaagcggtcccctggaaccctttctcgtg
tactgcaatatgactgcagacgccgcgtggacggtggtgcgtcacggtggcccagaccag
gtgaccgtcggaggcggcccccgggggcacgcaggctcggtgaccttcgcgtacgcggcc
agcgtggggcagctgcgggccgcggtggccctggcggagcgctgcgagcagcagctggcc
ttgcgctgcggctccggaccgcggtctgccgcgagagatggaaccccactgagctggtgg
gctggaagaaccaacgaaacacacacttactggggaggttctctgcctgatgctcaaaag
tgtacctgtggattacaggggaactgcattgactctcagtattactgcagctgtgacact
gaccaggatcaatggaccagtgacatcatagtccttgcccataaggagcacctgccagtc
actcaacttgcgatgacggacaggggccggccacactctgaagctgtttatacactgggg
cctctgctctgccagggggacaagtcattttggaattcagcttccttcaacaccgagact
tcataccttcattttcccactttccatggagaactcactgctgatgtgcggttctttttt
aagaccacagttccctctggtgtgtttatggagaacctggggatcacggacttcatcagg
atagagctgcagagtcccacagaagtgaccttttcctttgatgtggggaatggaccttgt
gaggtcactgtgcagtcacccaccccctttaatgacaatcggtggcaccacgtgagggca
gagagaaatgtcaaaggagcctctctgcaagtggatcagctccctcagaagacacaggct
gcccccacggacgggcacgtccgcctgcagctcaacagccagctcttcattggtgggacg
gccagccggcagcgaggcttcctggggtgcatccggtccctgcagttgaatggggtggcc
ctggacctggaggacagagccacggtgacgccaggggtggagccagggtgtgtcggacac
tgcagcagctacggacacctgtgtcgcaatggtgggagatgccgagaacggccccgaggg
gtggcctgcgactgcgccccctctgcctacgagggccccttctgcgtacacgagatttct
gcatattttgaaacgggctcctcagtgacctataattttcaagatcatcaccccttaagt
ggaaacgccagttccctggcttcttcattccacagggaggtgacactttcccgggagacc
atcaccctgagcttccggaccacgtgggctcccagcttactgctttacgtgagctctctc
tatgaggaatacctttccgttatcctggccaacaatggaagtttgcaagtcaggtacaag
ctagacagacatcaagatccagatgtttttaactttgattttaaaaacatggcggatggg
caccttcaccagctgaagatcgacagggaggaagctgtggtctttgtagaggttaaccag
agtgcacagagacaagtcatcctgtcctcggggacggaattcaacgccatccactccctc
acgttgggaaaggttttagagcccccgggcgcggacccggacacgcggcgggcggcggcg
cgcggcttcaccggctgcctctcggcggtgcgcttcggccgcgccgccccgctgaaggcg
ttgcgtcccggcggacctgcccgggtcaccgtccgcggccacgtggccgccggggcccgc
tgcgcggcgggggcgcagccgggcgacggagcgcgggagctggctccccggcgcgccggt
ggcgcaggtggcgcaggtcatccggaaccgaacgaggagggagagcctttggtgaatgct
aaccgaagcgactccggggtcatcggagctccccaggagatgcttggtgtgagaattcca
ctgaaaacacagttttcaaaaacagaagtcggcatggtggcgcacgtcggtgatcccagc
tactcgggtggcagaggcagaacgatggtaggttcgaggccagcctgggcaactgagcaa
gaccctgcttcaaaataa
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