Sciurus carolinensis (gray squirrel): 124965672
Help
Entry
124965672 CDS
T08117
Name
(RefSeq) DNA polymerase iota-like isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124965672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124965672
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124965672
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
124965672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
IMS_HHH
Cdd1
HHH_5
DNA_pol_lambd_f
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
124965672
NCBI-ProteinID:
XP_047382728
LinkDB
All DBs
Position
15:61181920..61204848
Genome browser
AA seq
718 aa
AA seq
DB search
MICSLNICMYFFAYCSAVHDQVVPTRNSSSRVIIHVDLDCFYAQVEMISNPELKDKPLGV
QQKYLVVTCNYEARKLGVRKLMNVRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFS
PVVERLGFDENFVDLTEIVEKKLQQLQSDELSAVSVSGHVYNNQSINLHDIMHIRLLVGS
QIAAEMREAMYNQLGLTGCAGVACNKLLAKLVSGVFKPNQQTVLLPESCQDLIHSLNHVK
EMPGIGYKTAKRLEALGISSVHDLQTFSSKILEKELGISVAQRIQKLSFGEDNSPVTPSG
PPQSFSEEDSFKKCSSEVEAKTKIEELLASLLKRISQDGRKPHTIRLVIRRYSSEKYCCR
ESRQCPIPSHVIQKLGAGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLKALN
TTKKGPMDYYLASSLSTSSCSGKRSFKIKDSHMENISKDKETNWDFLPSARIESIRTGES
PIDTSDFSKEKDKNEFPLCSLPEGVDQEVFKQLPVDIQEEILSGRFRENFQGKGSLSYPL
HASKGVLSFFSTKQLQDRSLNPRDNLSNNKQIHSVSPCEPGTSGLSSSSSSYLSSPKDYS
YYIDNRLKDEQMSQGPKESEGFYFSSTNPAVSVFHSFPNLHSDQLFSKNCATDSHKQTMA
TTSCQGLTENKEQDSADEKIIFPSGIDPQVFYELPEEVQKELLAEWRRPGSDFHIVHK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtagcctgaatatatgtatgtatttctttgcatattgttcagcagttcacgat
caagtagtgccaacccgaaattcttcatccagagtcataatacatgtggatctggattgc
ttttatgcacaagtagaaatgatctcaaaccctgaattaaaggacaaacctttaggtgtg
cagcagaaatatttggtggttacttgcaactatgaagccaggaaacttggagttaggaaa
cttatgaatgtcagagatgcaaaagaaaaatgtccacaactggtattggttaatggagaa
gacttgacccgttacagggagatgtcttataaggttacagaattgttggaagaatttagt
ccagttgttgagagacttggatttgatgaaaattttgtggatttaacagaaatagttgag
aagaaactccagcagcttcaaagtgatgaactttctgcagtgtctgtgtcaggtcatgta
tacaataatcagtccataaacctgcatgacatcatgcacatcagactgctagttggatct
cagattgcagcagagatgcgggaagccatgtataatcagttggggctcactggatgcgct
ggagtggcttgtaataaactactggcaaaattagtttctggtgtttttaaaccaaatcaa
caaacagtcttgttacctgaaagttgtcaagatctcattcatagtttgaaccatgttaag
gaaatgcctggtattggctataaaactgccaaacgtcttgaagcactgggaatcagtagt
gtgcatgatctccaaaccttttcatctaaaatattggaaaaggaattaggaatttcagtt
gctcagcggatccagaagctcagttttggagaggataactctcctgtgacaccttcagga
ccacctcagtcctttagtgaagaagattcatttaaaaaatgttcatcagaagtcgaagct
aaaacaaagattgaagaactacttgctagccttttgaagagaatatcccaagatggaagg
aaaccccatactataagattagtaatccgtcggtattcatcagagaagtattgttgtcgt
gagagtcgtcagtgccctattccatcccatgtaattcagaagttaggggcaggaaattat
gatgtgatgaccccaatggttgatatacttatgaaactttttcgaaatatggtgaatgtg
aaaatgccatttcaccttacccttttaagtgtgtgcttctgcaacctgaaagcactaaat
accactaagaaagggcccatggattattatttagcatcatcattatcaacatcgtcatgc
tctggcaagcgcagttttaaaataaaagacagtcatatggaaaatatttccaaagacaaa
gaaacaaactgggattttctaccaagtgcaagaattgaaagtataagaactggcgaatct
ccaatagatacttcagatttctctaaagaaaaagacaagaatgaatttccactctgttca
cttcctgagggtgttgaccaagaagtcttcaagcagcttccagtagatattcaggaagaa
atcctttctggaagatttagagaaaactttcaagggaaaggaagtttaagttatccatta
catgcctccaaaggagtgttatctttcttttctacaaaacaattgcaagatagatcctta
aatcctagagataatttatccaataacaagcagatacactctgtgtctccttgtgaacca
ggaacatcaggcttaagtagcagtagttcctcttatctgtctagtcccaaagattattca
tattatatagataatcgattaaaagatgaacaaatgagtcaaggacctaaagaatctgaa
ggtttctacttctccagtacaaaccctgctgtttctgttttccattcatttcccaatttg
catagtgatcaacttttttccaaaaactgtgctacagatagtcataagcaaacaatggca
acaacctcatgtcaaggactcacagaaaataaagagcaagattctgctgatgagaagatt
atttttccatctggcatcgatcctcaagtgttctatgaacttccagaagaggtacaaaaa
gaactgttggctgagtggaggagacctggatcagatttccacattgtacataagtaa
DBGET
integrated database retrieval system
