Sciurus carolinensis (gray squirrel): 124965733
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Entry
124965733 CDS
T08117
Name
(RefSeq) CXXC-type zinc finger protein 1 isoform X1
KO
K14960
COMPASS component SPP1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124965733
03036 Chromosome and associated proteins [BR:
ncar03036
]
124965733
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
124965733
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124965733
COMPASS/SET1 complex (yeast)
124965733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
124965733
NCBI-ProteinID:
XP_047382841
LinkDB
All DBs
Position
15:complement(57616568..57622021)
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AA seq
659 aa
AA seq
DB search
MEGDGSDPEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEK
MAKAIREWYCRECREKDPKLEIRYRHKKSRERDGNERDGSEPRDEGGGRKRPVPDPDLQR
RAGSGTGVGTMLARGSASPHKSSPQPLVATPSQHHQQQQQIKRSARMCGECEACRRTEDC
GHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSESLPRPRRPPPT
QQQPQPSQKLGRIREDEGAVASSAVKEPPEATATPEPLSDEDLPLDPDLYQDFCAGAFDD
HGLPWMSDTEESPFLDPALRKRAVKVKHVKRREKKSEKKVMDRKEERYKRHRQKQKHKDK
WKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQRIQQWQQ
SPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEESNENDS
DDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQ
SKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKLR
RAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSADR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagggagatggttcagacccagagcctccagatgcaggagaggacagcaagtcggag
aatggggaaaacgcgcccatctactgcatctgccgcaaaccggacatcaactgcttcatg
atcgggtgtgacaactgcaatgagtggttccatggggactgcatccggatcactgagaag
atggccaaggccatccgggagtggtactgtcgggaatgccgagagaaggaccctaagctg
gagattcgctatcggcacaaaaagtctcgagagcgtgatggcaatgagcgtgacggcagt
gagccccgggatgagggtggagggcgcaagaggcctgtcccagatccagacctgcagcgc
cgggcagggtcagggacaggggttgggaccatgcttgctcggggctctgcttcgccccat
aaatcttctccacagcccttggtggccacacccagccagcatcaccagcagcagcagcag
atcaaaaggtcagcgcgaatgtgcggcgagtgtgaagcatgccggcgcactgaggactgt
ggccactgtgacttctgccgagacatgaagaagtttgggggacccaacaagatccggcag
aagtgccggctgcgccagtgccagctgcgggcccgggaatcgtacaagtacttcccttcc
tcgctctcgccggtgacgccttcagaatccctgccaaggccccgccggccaccacccact
caacagcagccacagccatcacagaagctggggcgcatccgtgaagatgagggggcagtg
gcatcatcagcagttaaggagccacctgaggctacagccacacctgagccactctctgac
gaggacctaccactggaccctgacctgtaccaggacttctgtgcaggggcctttgatgac
catggcctaccctggatgagtgacacagaagagtccccattcctggaccctgccctacgg
aaaagagcggtgaaagtgaagcatgtgaagcgtcgggagaagaagtctgagaagaaggtg
atggataggaaagaggagcgatacaagcgtcatcggcaaaagcagaaacacaaagacaaa
tggaaacacccagagagggctgatgctaaggaccctgcatcattaccgcagtgcctgggg
cctggctgtgtgcgtgctgcccaacccggctccaagtattgctcagatgactgtggcatg
aagctggctgccaatcgcatctatgagatccttccccagcgcatccagcagtggcagcag
agcccctgcattgctgaggaacatggcaaaaagctgcttgaacgtattcgccgtgagcag
cagagtgcccgcacccgtcttcaggaaatggagcgcagattccatgagcttgaggccatc
attctgcgtgccaaacagcaggctgtgcgtgaggatgaggagagcaatgagaacgacagt
gatgacacagacctgcagatcttctgtgtctcctgtgggcaccccatcaacccacgtgtt
gccttgcgccacatggagcgctgctatgccaagtatgagagccagacgtcctttgggtcc
atgtaccccacacgcattgaaggggccacaagactcttctgtgatgtctacaatcctcag
agcaaaacatactgtaagcggctccaggtgctatgtcctgagcactctcgggatcccaaa
gtgccagctgacgaggtatgcgggtgcccccttgtacgtgatgtctttgagctcacaggt
gatttctgccgcctgcccaagcgtcagtgcaatcgccattactgctgggagaagctgcgg
cgtgctgaagtggacttggagcgtgttcgggtgtggtacaagctggatgagttgttcgaa
caggagcgcaatgtacgcacagccatgacaaaccgggcagggttactggccctgatgctg
caccaaaccattcagcatgacccactcactaccgacctgcgctccagtgccgaccgctga
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