Sciurus carolinensis (gray squirrel): 124965759
Help
Entry
124965759 CDS
T08117
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124965759
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124965759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_2
RET_CLD1
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
124965759
NCBI-ProteinID:
XP_047382867
LinkDB
All DBs
Position
15:complement(40791573..40818756)
Genome browser
AA seq
896 aa
AA seq
DB search
MAVASAAPGSIFCKQLLFSLLVLILFCHACQKISLQVPSHLQAETLVGKVNLEECLKSSS
QILSSDPAFRILEDGSIYTTHDLFLSSEGKTFSILLSDSQKQDQKEIEIVLLARDKKAPK
KRHTKDTVLKRSKRKWAPIPCSLMENSLGPFPQHVQQIQSDAAQNYTIFYSISGPGVDKE
PFNLFYIEKDTGDIFCTRSIDREQYDQFLVYGYATTADGYAPDYPLPLLFKVEDDNDNAP
YFENKMTVFSVPENCRSGTSVGQVTAIDNDEPGTLHTRLKFKILQQIPDHPKHFSIHPDT
GVITTTTPLLDREKCDTYKLVMEVRDMGGQPFGLFTTGTITISLEDENDNPPYFTETSYS
TEVEENRIDVVILRMRVHDQDLANTPHSRAVYTILQGNENGNFKISTDPNTNEGILCVVK
PLNYELNRQVILQIGVLNEAQFSKAANSQTPPTMCTTTVTVRIKDSDEGPECQPPVKIIQ
SKDGLPPGKELLGYKALDPETRSGEGLRYQKLGDEDNWFEIDEHTGDLRTVKVLDRESKF
VKNNQYNVSVVATDAVGRSCTGTLVVLLEDYNDHPPKIDKEVTICKHDKDYAILEPEDED
GPDNGPPFQFFLDNSANKLWTLESKNGKQGVLRAKQNLDYNYYSVPIQIQDRHGLSAKHV
LSVRVCDCTTPSDCRMAVKDDRDIKPGNVILGKWAILAMVLGSALLLCIMFACFCVTTKR
TVKKCFPEDVAQQNLIVSNTEGPGEEVTEANIRIPTQGSNICDTSMSVGTLGGQGIKTQQ
SFEMVKGGYTLDSNKGHHTLESSKGIGQGGADPGRYAYTDWQSFTQPRLGEKVYLCGQDE
EHKHSEDYVRSYNYEGKGSMAGSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctccgctgccccagggagcatcttctgtaagcagctccttttctctctc
ctggttctgatattattttgccatgcttgtcagaaaatttctcttcaagttccttctcat
cttcaggctgaaacacttgtaggcaaagtgaatctggaggagtgtctcaagtcgtctagc
caaatcctgtccagtgaccctgcctttagaattctggaagatggctcaatatatacaaca
catgacctctttttgtcttctgaagggaagactttttccattctactctcagacagtcag
aagcaggatcaaaaggagatagaaattgtactgttggcaagagataaaaaggcacctaag
aaaagacataccaaagacacagtccttaagcgcagtaagagaaaatgggctcctattcct
tgttcactgatggagaactcattaggtccatttccacaacatgttcagcagatccaatct
gatgctgcccagaattacaccatcttttactccataagtggaccaggagtggacaaagag
cccttcaatttgttctacatagagaaagacactggggatatcttttgtactcggagcatt
gaccgtgagcagtatgatcagtttttggtatatggctatgccacaactgcagatggctac
gcaccagattatccactccccttattattcaaagtcgaagatgataatgataatgcccca
tattttgaaaacaaaatgacggtttttagtgtgcctgaaaattgccgatctggaacttca
gtgggacaggtgactgccatagataatgatgaacctggaaccctacatactcgtctgaaa
ttcaaaatcctgcaacaaatcccagatcatccaaagcatttctccatacatccagataca
ggtgtcatcactacgactacacctttgctagacagagagaaatgtgatacttacaagtta
gtaatggaagtgcgagacatgggaggtcaaccttttggtttatttactacaggaacaatc
accatttcacttgaggatgaaaatgacaatccaccatatttcacagaaacttcttattct
acagaagtagaagaaaacagaattgacgttgtgattttacgaatgagggtacatgaccaa
gatttggccaatacgcctcactcaagggctgtgtacacaatcctacagggaaatgaaaat
ggaaacttcaaaattagtacagatccaaatacaaatgaaggaatcttgtgtgttgtcaag
ccattgaactatgaactcaatcgccaagtcattttgcaaattggtgtacttaatgaagca
cagttctctaaagcagcaaactcacaaactcctcctacaatgtgtactacaactgtgact
gtgagaattaaagacagtgatgagggtcctgaatgccagccaccagtgaaaattattcag
agtaaagatggccttccacctggaaaggaactccttggatacaaagcactggacccagaa
acacgcagtggtgaaggcttaaggtatcagaagttaggagatgaagataactggtttgaa
attgatgaacacactggagatttgagaactgtaaaagtattagatagagaatcaaaattt
gtaaaaaacaaccagtacaatgtttcagtggtggcaacagatgcagttggccgatcttgc
actggaacactagtagttcttttggaagattacaatgatcacccaccaaaaattgataaa
gaagtgaccatttgtaagcatgataaagattatgctattctggaacctgaagatgaagat
gggcctgataatggtccaccttttcaattctttctggataattctgccaacaaactttgg
actctagaatcaaagaatggtaaacaaggtgttcttcgtgcaaagcaaaatcttgattat
aactattattctgtgcctatccaaatacaagacagacatggtttatctgcaaaacatgtg
ttgtcagtgagagtatgtgactgcacaactccatctgactgtagaatggctgttaaagat
gacagagatattaaaccaggaaatgtaatacttggaaaatgggctattcttgccatggtg
ttgggatctgcactgttattgtgtattatgtttgcatgtttctgtgttactactaagaga
acagtaaagaaatgctttccagaagatgtagcccagcaaaatttaattgtatcaaatact
gaaggacctggagaagaagtgacagaagcgaatattaggatccccacacagggatccaac
atttgtgatacaagtatgtctgttggtacgcttggtggccagggaatcaaaacgcagcaa
agttttgagatggtcaaaggaggctacactttggattccaacaaaggccatcacaccttg
gagtccagcaagggaatagggcagggaggagcagaccctggcagatatgcatacacggac
tggcagagtttcacccaacctcggcttggcgaaaaggtgtacctgtgtggacaagatgag
gaacacaaacattctgaagactacgttcgctcctataattatgaaggcaaaggctctatg
gccggctcggtaggctgctgcagtgatcggcaggaagaagaggggctggagtttctagat
cacctggaacccaaatttaggacattggcaaagacatgtgtaaagaaataa
DBGET
integrated database retrieval system
