Sciurus carolinensis (gray squirrel): 124965827
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Entry
124965827 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: zinc phosphodiesterase ELAC protein 1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124965827
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
124965827
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
124965827
Prokaryotic type
124965827
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
124965827
NCBI-ProteinID:
XP_047382929
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Position
15:58172095..58182695
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AA seq
366 aa
AA seq
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MSMDVTFLGTGAAYPSPTRGASAVVFRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFI
THLHGDHFFGLPGLLCTISLQSGSVVTKQPIEIYGPVGLRDFIWRTMELSHTELVFPYVV
HELVPTEDQCPTEVLKESSHVDKATESSTSPKEGQGRTILLDSEENSYLLVDDEQFVVKA
FRLFHRIPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQD
VLKKPVVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDTQMDKAKEHGHSTPQMA
ATFAKLCQAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVI
GIPIKK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggatgtgacgtttcttgggaccggtgcagcatatccatcccctactcggggt
gcctctgctgtggtctttcggtgtgagggtgaatgctggctctttgactgtggagagggg
acacagacacagcttatgaaaagccaactgaaggcagggagaattaccaagatcttcatc
acacatcttcatggggaccatttctttggccttcccggcctcctctgcacaatcagcctg
cagagtggctctgtggtcaccaaacagccaattgaaatctatggccctgtagggcttcgg
gactttatctggcgaaccatggagctctctcacacagagttggtgttcccttatgtggtc
catgagttggtgcccacagaagaccagtgtcctacagaagtactaaaagaatcttcacat
gtggataaagcaacagagagctccacctctcccaaagagggacaaggaagaactatccta
ttagactcagaagaaaactcataccttcttgttgatgatgaacagtttgttgtaaaagca
tttcgcctctttcacagaattccctcctttggattttcagttgtagaaaagaaacgtcca
ggtaaactcaatgcacagaagttgaaagaccttggtgttccaccaggtcctgcctatggg
aagctgaaaaatggaatctctgttgttttggaaaatggggttacaatttctccccaagat
gtcttaaaaaagcctgttgttggaagaaaaatatgcatattgggtgactgttctggggtt
gtaggagatggaggagtgaaactgtgctttgaagcagacctgttgatccacgaggcaact
ctcgatgacacccagatggacaaagcaaaggagcacggccacagcacacctcagatggca
gcaacatttgcaaagttgtgccaggcaaagaggctggttctgactcacttcagtcagagg
tacaaaccagttgccttggccagagaaggagaaacagatggcattgcagaactgaaaaag
caagcagaatcggtattagatctccaagaagtgactctagcagaagattttatggtgatt
ggcattccaatcaagaaatga
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