Sciurus carolinensis (gray squirrel): 124965830
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Entry
124965830 CDS
T08117
Name
(RefSeq) laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04151
PI3K-Akt signaling pathway
ncar04510
Focal adhesion
ncar04512
ECM-receptor interaction
ncar04820
Cytoskeleton in muscle cells
ncar05145
Toxoplasmosis
ncar05146
Amoebiasis
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05222
Small cell lung cancer
ncar05410
Hypertrophic cardiomyopathy
ncar05412
Arrhythmogenic right ventricular cardiomyopathy
ncar05414
Dilated cardiomyopathy
ncar05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124965830
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124965830
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124965830
09142 Cell motility
04820 Cytoskeleton in muscle cells
124965830
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124965830
09162 Cancer: specific types
05222 Small cell lung cancer
124965830
09172 Infectious disease: viral
05165 Human papillomavirus infection
124965830
09174 Infectious disease: parasitic
05146 Amoebiasis
124965830
05145 Toxoplasmosis
124965830
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124965830
05412 Arrhythmogenic right ventricular cardiomyopathy
124965830
05414 Dilated cardiomyopathy
124965830
05416 Viral myocarditis
124965830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_I
Laminin_N
Laminin_II
Laminin_G_3
baeRF_family5
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
124965830
NCBI-ProteinID:
XP_047382930
EnsemblRapid:
ENSSCRG00010015901
LinkDB
All DBs
Position
15:24425985..24590051
Genome browser
AA seq
3080 aa
AA seq
DB search
MRGGCARGALLASLLWVAVQCQQRGLFPAILNLASNAHISANATCGEKGPEMFCKLVEHV
PGRPIRNAQCRVCDGSSVNPKERHPISNAIDGTNNWWQSPSIQNGREYHWVTITLDLRQV
FQVAYVIIKAANAPRPGNWILERSLDGTTFSPWQYYAVSDTECLTRYNITPRRGPPTYRA
DDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSPKLLEFTSARYIRLRLQRIRTLNA
DLMTLSHREPKDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDETTKKLQCLCEHNT
CGESCNRCCPGYHQQPWRPGTVSSGNTCEECNCHNKAKDCYYDESVANQKRSLNTAGQFR
GGGVCINCQQNTMGINCETCVDGYYRPHKISPYEDEPCHPCDCDLVGSLSAICVKDDLHS
DINKGKWPGQCPCKEGYAGEKCDRCQFGYKGYPNCVPCDCNPTGSVNEDPCTEPCLCKEN
VEGENCDRCKPGFFNLKDRNPQGCSECFCFGVSGVCDSLSWHIGQVNDMSGWLVTDLVSS
SKIHSQQEALSGRHQISINNTMVMQRLTSKYYWSAPEAYLGNKLTSFGGFLKYTVSYDIP
VETVDSDLMSHADVIIKGNGLTVSTQAEGLSLQPYEEYFNVVRLVPENFRDFNNKKEIDR
DQLMTVLANVTHLLIRANYNSARMAHYRLDSVSLDTASPNAIDLAVATDVEHCECPPGYT
GTSCESCLSGYYRVDGILFGGICQPCECHGHASECDVHGVCLACAHNTTGDHCERCLPGF
YGLPSRGTPGDCQPCACPLSTASNNFSPTCHLNGDEVVCDQCAPGYSGAWCERCADGYYG
NPTVPGESCVPCDCNGNVNPSEAGHCDSVTGECLKCVGNTDGPHCERCADGFYGDAVTAK
NCQACDCHEKGSLSDVCHLETGLCECKPHVTGQQCDQCLPGYYGLDTGLGCLPCNCSTTG
STSDECTDEGQCHCIPGVAGERCDRCSRGFYAYQDGGCTPCDCAHTQNNCDPESGKCICP
PHTRGLECEECEEGYWGLDLNHGCQACNCSREGSTSPQCHMLSGHCQCKLEFGGQSCNQC
SLGYRDFPKCIPCDCDLRGTLVDTCDLDRGLCSCVEETGTCSCKENVFGLQCNKCRTGTF
ALHADNPLGCSPCFCFGLSHLCSELEGYVRTPVTLDSNQPLLRVVSQSNLRGTTEGVYYQ
APDVLLDATTVRQHVHAEPFYWRLPAQFQGDQLLAYGGKLKYSMAFYSSDGIGTSNYEPQ
ILIRGGRTRKQVIYMDVPAPENGVRRDQEVDMKENFWKYFNSVSEKPVTRSDFMSVLSNI
EYILIKASYGQGLQQSRISNISMEVGTKATELHPKREVASLLENCLCPPGTAGFSCQDCA
PGYHRGKLPEGSGRGPRPLLAPCVPCNCNNHSETCDPETGKCLNCRDNTAGDHCDVCAPG
YYGKVTGSTGDCSPCTCPHRYPSSFSPTCILEGDGDFRCDACTQGYEGQYCERCASGYHG
DPRTPGGSCQKCDCSPQGSVHSDCDRMSGQCTCRPGATGIRCQECQPRHMLVESNCVSCD
DECAGVLLNDLDNVGDAILSMNLTGIFPVPHRVLSNLENTTKYLQESLLKENTQKNWAGI
QLEGVAEQTEDLQKQLTRVLTNSQQVNRATERILDKSQDLAAFIERLHHSIREILEKATT
LNQTWDEDFHLPDSALHNMQQNISSLLEIIQKRNFTHLHQNATLELKAAEDLLSQVQKHY
QKPQEELEVFKKAAKGLLSKHNSDLRAVEELLRDAETKTQESNRLLLIVKANLREFRDKK
LRVQEEANLTSKLIAKGRGLIDAASTHGDTAQNALAQLEHHRDELLLWTAKIRHHVDDLV
MQMSKRRAIDLVHRAEDHAAELQRLAGVLDRGLENVRHVTLNATSAAHVHSTLQSLTEES
EKLASDAYRTINKISLFSESLLSNGTAALQRSSRFLNKSNNLSRKHQGITLELSKLRHRA
NGFQENADEIIRQTNESLLILRAIPEGMRDKGTKTKELALSANESAVRTLKDVVGLSQKL
LNTSTGLSRMNTTLQEMNGLLRDSTVTTLLAGRKVKDMETQANLLFDRLKPLKTLQENLS
RNLSEIRLLINQARKQAASIKVAVAADRDCIRAYQPQISSSNYNTLTLNVKTPEPDNLLF
YLGSSTSSDFLAVEMRRGKVAFLWDVGSGSTRLEFPDFPIDDNQWYSIHATRFGNVGSLS
VKEMSSTQKSPMKTSKSPGMANVLDINNSTLMFVGGLGGQIKKSPAVKVTHFKGCMGEAF
LNGKSIGLWNYVEREGKCDGCFSSPQNEDSSFHFDGSGYSVVEKTLRATVTQIIMLFSTF
SPNGLLLYLASNGTKDFLSIELVQGRVKVAVDLGSGPLVLMTDRRYNNGTWYKIAFQRNR
KQGLLAVIDAYDTSDKETKQGETPGPSSDLNRLEKDLIYVGGVPWSRVVRKGVTSKRYMG
CIRNLEISRSTFDLLRNSYGVRKGCRLEPIQSVSFLRGGYVELPPTSLSPESELLATFVT
QNSSGIILAALGRDAEKQGRRQAHMPFFSILLTEGHIEVHVSSGDGTSLRKALLHAPTGT
YGDGKEHSISLVRNWRIITVQLDEANPVELKLGPLAESKTINIFNLYIGGIPKDVEIPML
KMRRSFQGCIKNLIFNMELLDFTHAVSYEQADLDTCLLSERSKLALHGEDSELPPEPPTL
PQPEQCAVDIAPGYVPGAYQFGLSQSSHLTLPFNQSAVRRRLLVQLNIRTFASSGLIYYM
AHQNQVDYATLQLQRGRLHFMFDLGKGRTKVSHPALLNDGKWHMVKTEYFKRKGSMTVDG
QESPMVTMVGDGTTLDVEGMLYLGGLPSQYRARNIGNITHSIPACISEVTVNSRQLDKDS
PVSAFAVGRCYAVAQEGTFFEGSGYAALVKEGYKVRSDLNITLEFRTSSENGVLLGISSA
KVDAIGLEIVNGKLLFHVNNGAGRITATYEPRAARTLCDGKWHTLQANKSKHRVILIVDG
NAVSAESLHTQSTSADTNNPIYVGGYPADVKQNCLSSRASFRGCLRKLTLTKGPQVQSYD
FNTAFDLQGVFPHSCPGTEP
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcggctgcgcgcggggcgcgctcctggcctcgctgctctgggtcgccgtgcag
tgccagcagagaggtttgttccctgccattcttaacctggccagcaatgctcacatcagt
gccaacgcgacctgtggagagaaggggcctgagatgttttgcaaacttgtggagcatgta
cctggccgacctatacgaaatgcccagtgccgggtctgtgatggcagcagcgtgaacccc
aaagaacgccacccaatatcaaatgcaatagatggcaccaataactggtggcaaagtccc
agtatccaaaatgggagagagtatcactgggtcacgatcacgctggacctaagacaggtt
tttcaagttgcctacgtcatcattaaagccgccaatgcccccagacctggaaactggatt
ttggagcgctctctggatggcaccacattcagcccctggcagtattacgcagtcagtgac
acggagtgtttgacacgctacaatataactccaagacgggggccgcccacttacagagct
gacgatgaagtgatctgcacctcctattattctagactggtgccactggagcatggagag
attcatacatcactcatcaatggcagaccaagtgctgacgatccttcccccaagttgttg
gaatttacctctgcacgatacatccgccttcgattacagcgcatcagaacgctcaatgcg
gatctcatgacccttagccaccgggaacccaaagacctcgatcccattgttacgagacga
tattactattcgataaaggacatttctgttggagggatgtgcatttgctacggccatgct
agcagctgcccatgggatgaaactacaaagaaactacagtgcctatgtgaacacaatact
tgcggagagagctgtaacaggtgctgtcctgggtaccaccagcagccctggaggcctggg
accgtttcctctggtaacacatgtgaagaatgtaactgtcacaataaagccaaagactgt
tactacgatgaaagtgtcgccaatcagaagagaagcttgaatacggctgggcagttcaga
ggaggtggggtttgcattaattgccagcagaacaccatgggaatcaattgtgaaacctgt
gtggatggatattatagaccacataaaatttccccttatgaggatgaaccttgccatccc
tgtgactgtgaccttgtggggtccctcagtgccatctgtgttaaggatgatctgcattct
gacataaacaagggaaaatggccaggccagtgtccatgtaaggaaggttatgcaggagaa
aaatgtgatcgctgccagtttggctacaagggttatccaaactgtgtcccctgtgactgc
aatccaactggcagtgtgaacgaggatccatgcacagagccgtgtctttgtaaggaaaat
gtcgaaggggaaaattgtgaccgctgcaaaccaggcttctttaacttgaaggacagaaac
ccccagggctgctctgagtgcttctgctttggtgtctccggtgtctgcgacagcctttct
tggcacattggtcaggtgaatgatatgtctgggtggctggtcaccgacttggtcagttca
agtaagatccattctcagcaagaggcgctgagtgggcgccatcagatcagcatcaacaac
accatggtcatgcagagactgacttccaagtactactggtcggcccctgaggcctacctt
ggaaataagctgacctcatttggtgggttcctgaaatacacggtatcttatgatattcca
gtggagaccgtggacagtgacctcatgtctcatgcggacgtcatcatcaagggaaatgga
ctcactgtaagcacacaggctgagggcctgtcattgcaaccctatgaagagtacttcaat
gtggttagacttgtgcctgagaatttccgagacttcaataacaagaaggagatcgatcgt
gaccagttgatgaccgtccttgccaatgtgacacatctcttgatcagagccaactacaat
tctgcaagaatggcacattacaggttggattctgtctccttggacacagcgagccctaat
gctatagacctggcagtagccaccgatgtggagcactgtgaatgcccgccaggctacaca
gggacatcctgcgagtcctgcctctctggttattatcgagtcgatggaatactctttgga
ggaatttgtcagccctgcgaatgccatggccacgcatcagagtgtgatgttcacggagtt
tgcttggcatgtgcccacaacaccactggggaccactgtgagcggtgcctgcctggcttc
tatgggttgccttcccgtgggactcctggggactgccagccttgtgcctgtcctctctcc
acagcttccaacaatttcagtcccacctgccatctcaatggagacgaagtagtctgtgac
cagtgtgctccaggttactcaggagcttggtgcgagagatgcgcggatggttactatgga
aacccaacagtgcctggagaatcctgtgtaccgtgtgactgcaacgggaacgtcaacccc
tccgaggctggtcactgtgactctgtcaccggggaatgcctgaagtgtgtgggaaacaca
gacggcccccactgcgaaaggtgtgcagatgggttctatggggatgcggtgactgccaaa
aattgccaagcctgtgattgccatgagaaaggttccctttctgatgtgtgccatcttgag
actggactctgtgaatgcaaaccccacgtgactggacagcagtgtgaccaatgcctgcca
ggctattatgggctggacacagggcttggctgcttgccctgcaactgcagcaccacaggc
tccacctcggacgagtgcacagatgaaggccagtgtcactgcattccaggtgtggctggg
gaaaggtgcgacaggtgttcgcgtggcttctatgcctaccaagatggtggctgcacaccc
tgtgactgtgctcatacacagaataattgtgaccctgaatctggaaagtgcatctgccct
cctcatactcggggtctggaatgtgaagaatgtgaggaagggtactggggtctagacctg
aatcatgggtgccaggcctgcaattgtagtcgtgaggggtccaccagtccccagtgtcac
atgctttctggccattgccagtgcaaactggaatttggtgggcagagctgcaatcagtgc
tccttgggttacagagactttcccaaatgcattccctgtgactgcgacctgagggggacg
ctggtggacacctgtgacctggatcggggtctctgcagctgtgtggaggaaactggcacc
tgctcttgcaaggaaaatgtctttggcctccagtgcaacaagtgtcgtaccggcaccttt
gccctgcatgctgacaaccctctgggatgcagcccctgcttctgctttgggctgtcgcac
ctctgctcagagttggagggatatgtgaggaccccagtgacgctggactccaatcaacct
cttctgcgtgtggtttctcaaagcaacctgaggggcaccactgagggggtgtattaccag
gcccccgatgtcttgctggatgccacaacggtccgtcagcatgtccacgcggagccgttt
tactggcggctgccagctcagttccagggagaccagctcctggcatatggtggcaaacta
aagtacagcatggccttctactcttctgatggcattggcacctccaattatgagcctcaa
attctcatcagaggaggtcgaaccagaaagcaagtcatttacatggatgtaccagcacca
gagaatggagtgagacgggaccaagaagtagacatgaaagagaatttttggaaatatttt
aactctgtttctgaaaaacccgtcacacgttcggattttatgtccgtccttagcaatatt
gagtacatcctcatcaaggcatcatatggtcaaggattacagcaaagcagaatctcaaac
atttcaatggaggttggcacaaaggctactgagctgcaccctaagagagaagtggcttct
ctgttagagaattgtctctgtccccctggcacagctggattctcatgtcaggactgtgcc
cctggataccacagagggaagcttccagaaggcagtggcaggggaccacgccctctgctt
gctccttgtgtgccctgcaactgcaacaaccacagtgagacttgtgaccccgaaactggg
aagtgtctgaactgccgtgataacacagctggtgaccactgtgacgtgtgcgctcctggc
tactatggaaaggtgactggctccactggggactgttctccatgcacctgtcctcatcgc
tacccttccagctttagtcccacttgcatcttggaaggtgatggagatttccgttgtgat
gcctgtactcagggctacgaaggacaatattgtgaaaggtgcgcctcaggctaccacggg
gaccctcggacaccgggtggcagttgccagaagtgtgattgcagcccacagggctctgtt
cacagtgactgtgaccgcatgtccgggcagtgcacttgcaggccaggggccacgggaatc
cgatgccaggaatgccagccaaggcacatgctggtggagagcaattgtgtttcttgtgac
gacgagtgtgctggtgtgctgctgaatgacttggataacgttggcgacgccattctttcg
atgaacctcaccggcatcttccctgtcccacacagagttttgtcaaacctggaaaataca
actaaatatctccaggaatctttattaaaagaaaatacccaaaagaattgggcaggaatt
caactggaaggtgttgcagaacaaacagaggacctgcaaaagcagctcaccagagtgtta
acaaacagccagcaggtaaacagggcaacagagcgaattctcgacaagagtcaagacctg
gctgcattcattgagaggctgcatcacagcatcagagaaatccttgaaaaggcaacaact
ttaaatcagacctgggatgaagatttccacctacccgattctgctcttcacaatatgcaa
cagaacatttcctctttgctggaaattatacagaaaaggaatttcacacatttgcaccaa
aatgccacccttgaactcaaggctgctgaagatttattgtcacaagttcaaaaacattac
cagaagccacaggaagagttggaggtatttaaaaaagcagccaaaggcctcctttcaaag
cataacagtgatctgcgggcagtcgaagagctcctgagggatgcggaaaccaagacccag
gagagcaaccgcctgctgctcattgtcaaggccaacctgagagaattcagggataaaaag
ctgcgtgttcaagaagaagcgaatttgacctcaaagctaattgccaaaggaagaggattg
atagatgcagctagtacacatggagatactgcacaaaatgctctagcacagttggagcat
cacagggatgagctgcttctgtggactgctaaaatcaggcaccatgtagatgacctggtc
atgcagatgtccaaaaggagagcaattgaccttgtccacagagctgaggaccatgccgct
gagctccagagacttgcaggtgttttggaccgtggccttgaaaatgtcagacatgtgacc
ctgaatgcaaccagtgcggctcatgtccactccacccttcagagcctgacagaagaatcg
gaaaagctggccagtgatgcttacaggaccataaataagatcagcttgttctcagaatcc
ctcctttctaatgggacagcagctctgcagcgcagttccaggtttctaaacaaaagcaac
aacctcagcagaaagcaccaaggtattacattggagctgagtaaattgagacacagggca
aatggatttcaagagaatgcggatgaaattattagacagaccaatgaatcactcttgata
cttagagcaattcctgaaggtatgagagacaaaggaaccaaaaccaaagagctggccctg
tctgccaacgagagtgccgtgagaacactgaaggacgtcgtgggactgagccagaagcta
ttgaacacctcaaccggcctgtccaggatgaacaccacattgcaggagatgaatggactt
ctgcgggactccacggtgaccactctgttggctggaagaaaagttaaagacatggaaaca
caagccaaccttttatttgatcggttgaaacctttgaagacattacaggagaacctgagc
agaaatttatcagaaattagacttctgatcaaccaggcacggaaacaggcagcttctatt
aaagtcgctgtagctgctgacagagactgtatccgggcctaccagcctcagatttcttct
agtaactataacaccttgacactgaatgttaagacacctgaacctgacaacctgcttttc
taccttggcagcagcaccagttctgatttccttgcagtggagatgcgacgggggaaagtg
gccttcctctgggatgtgggctccgggtccacacggctggaatttccagactttcccatt
gatgacaaccagtggtacagcatccacgcaaccaggtttggaaatgttggttcattgagt
gtgaaggaaatgagttcaactcaaaagtcaccaatgaaaacaagtaaatcccccggaatg
gctaatgtgctggatataaacaattcaacactcatgtttgttggaggactcgggggacaa
atcaagaaatctccagcagtgaaggtgactcattttaaaggctgcatgggagaggccttc
ctgaatggcaaatccattggcctctggaactacgtcgaaagggagggcaagtgcgatggc
tgcttctcaagcccccagaatgaagactcttccttccattttgacgggagtggatactcg
gtggtagagaagacgctccgggccactgtgactcagatcataatgctctttagtaccttc
tcacctaatggtcttcttctctacctggcttcaaatggcactaaagacttcttgtccatc
gagctggtgcagggtagagttaaagttgcagttgacctgggttcaggacctcttgttctt
atgacagacagacggtataacaatggaacctggtacaaaattgccttccagcgaaacagg
aagcaaggactcctagctgttattgatgcatatgacactagtgataaggagaccaaacaa
ggggaaactccaggaccatcttcagatctcaatcgactagaaaaagatctgatttatgta
ggcggagtaccttggtcaagagttgtaaggaaaggtgtcaccagcaaaagatatatgggc
tgtatcaggaacctggaaatatccagatctaccttcgatttgctcagaaattcctatgga
gtgaggaaaggctgtagactggagcctattcaaagcgttagcttcctgaggggcggctac
gttgagttgccacccacatctttgtcaccggaatcggaattgctggccacatttgtcacc
cagaacagcagtggcatcatcctggctgcccttggcagggatgcagagaagcagggtcga
cggcaggcgcacatgcccttcttttccatcttgctgactgaaggccacattgaagtacat
gtgagctctggagacggaaccagcctgaggaaagctctcttacacgctcccacaggcact
tacggcgacggaaaagagcattccatctccttggttaggaattggagaattatcactgtt
cagttggatgaggccaatcctgtagaactgaagttaggcccactggcagagagcaagacg
ataaacatattcaacctgtacataggagggattcccaaggatgtggagataccaatgctc
aaaatgaggagatcattccagggctgtatcaaaaacctgatcttcaacatggaacttttg
gatttcacccatgcagttagctatgaacaagcggacttggacacctgcttgctttcagaa
aggtccaagctggcccttcacggagaggacagtgagcttccaccagaaccccctactcta
ccacagcctgaacagtgtgcggtggacatcgctcccggttatgtgcctggtgcttaccag
ttcggcctctcacaaagcagccacttgacattgccttttaatcagtcagctgtcagaagg
aggctcttagttcagctaaatatccggacgtttgcctccagtggtctgatttactacatg
gctcatcagaaccaagtggactacgccacgctccagctccagaggggccgcctccacttc
atgtttgaccttggcaaaggccgaaccaaggtctctcaccctgcgctgctcaacgatggc
aagtggcacatggtcaagacagagtactttaaaagaaaaggctccatgactgttgatggc
caagaatcccccatggtgaccatggtgggagatggaaccacactggacgtggagggtatg
ctgtacctgggaggccttccctcccagtacagggccaggaacattggaaatatcacccac
agcatccctgcctgcattagtgaggtgacagttaacagcagacagctggacaaggacagc
ccggtatctgcctttgcagtaggcaggtgctatgcagtggcccaagaaggaactttcttt
gaaggaagtggatatgcagcacttgtcaaagaaggctataaagtccggtcagatttaaac
atcacactcgagtttcgtacctcctcagaaaatggtgtcctcctggggatcagcagtgcc
aaagtggatgccatcggcctagagattgttaatggcaagctcttatttcatgtcaataac
ggtgctggaagaataacggccacttacgagcccagagctgccaggactctctgtgatgga
aaatggcacacccttcaagctaacaaaagcaaacaccgtgtcattctgatagtagatggg
aacgcagtcagtgccgaaagtctacacacccagtccacctcggcggacaccaacaatccc
atctatgttggtggctatcctgctgatgtcaagcaaaactgcctgagcagccgagcctcg
ttccgggggtgtttgaggaagcttaccctgactaagggcccacaggtgcagtcctacgac
ttcaacacagctttcgacctacagggagttttccctcattcctgtccagggactgagccc
tga
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integrated database retrieval system