KEGG   Sciurus carolinensis (gray squirrel): 124965830
Entry
124965830         CDS       T08117                                 
Name
(RefSeq) laminin subunit alpha-1-like
  KO
K05637  laminin, alpha 1/2
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04151  PI3K-Akt signaling pathway
ncar04510  Focal adhesion
ncar04512  ECM-receptor interaction
ncar04820  Cytoskeleton in muscle cells
ncar05145  Toxoplasmosis
ncar05146  Amoebiasis
ncar05165  Human papillomavirus infection
ncar05200  Pathways in cancer
ncar05222  Small cell lung cancer
ncar05410  Hypertrophic cardiomyopathy
ncar05412  Arrhythmogenic right ventricular cardiomyopathy
ncar05414  Dilated cardiomyopathy
ncar05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    124965830
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124965830
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124965830
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124965830
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124965830
  09162 Cancer: specific types
   05222 Small cell lung cancer
    124965830
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124965830
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    124965830
   05145 Toxoplasmosis
    124965830
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    124965830
   05412 Arrhythmogenic right ventricular cardiomyopathy
    124965830
   05414 Dilated cardiomyopathy
    124965830
   05416 Viral myocarditis
    124965830
SSDB
Motif
Pfam: Laminin_G_1 Laminin_EGF Laminin_G_2 Laminin_B Laminin_I Laminin_N Laminin_II Laminin_G_3 baeRF_family5 3keto-disac_hyd
Other DBs
NCBI-GeneID: 124965830
NCBI-ProteinID: XP_047382930
EnsemblRapid: ENSSCRG00010015901
LinkDB
Position
15:24425985..24590051
AA seq 3080 aa
MRGGCARGALLASLLWVAVQCQQRGLFPAILNLASNAHISANATCGEKGPEMFCKLVEHV
PGRPIRNAQCRVCDGSSVNPKERHPISNAIDGTNNWWQSPSIQNGREYHWVTITLDLRQV
FQVAYVIIKAANAPRPGNWILERSLDGTTFSPWQYYAVSDTECLTRYNITPRRGPPTYRA
DDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSPKLLEFTSARYIRLRLQRIRTLNA
DLMTLSHREPKDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDETTKKLQCLCEHNT
CGESCNRCCPGYHQQPWRPGTVSSGNTCEECNCHNKAKDCYYDESVANQKRSLNTAGQFR
GGGVCINCQQNTMGINCETCVDGYYRPHKISPYEDEPCHPCDCDLVGSLSAICVKDDLHS
DINKGKWPGQCPCKEGYAGEKCDRCQFGYKGYPNCVPCDCNPTGSVNEDPCTEPCLCKEN
VEGENCDRCKPGFFNLKDRNPQGCSECFCFGVSGVCDSLSWHIGQVNDMSGWLVTDLVSS
SKIHSQQEALSGRHQISINNTMVMQRLTSKYYWSAPEAYLGNKLTSFGGFLKYTVSYDIP
VETVDSDLMSHADVIIKGNGLTVSTQAEGLSLQPYEEYFNVVRLVPENFRDFNNKKEIDR
DQLMTVLANVTHLLIRANYNSARMAHYRLDSVSLDTASPNAIDLAVATDVEHCECPPGYT
GTSCESCLSGYYRVDGILFGGICQPCECHGHASECDVHGVCLACAHNTTGDHCERCLPGF
YGLPSRGTPGDCQPCACPLSTASNNFSPTCHLNGDEVVCDQCAPGYSGAWCERCADGYYG
NPTVPGESCVPCDCNGNVNPSEAGHCDSVTGECLKCVGNTDGPHCERCADGFYGDAVTAK
NCQACDCHEKGSLSDVCHLETGLCECKPHVTGQQCDQCLPGYYGLDTGLGCLPCNCSTTG
STSDECTDEGQCHCIPGVAGERCDRCSRGFYAYQDGGCTPCDCAHTQNNCDPESGKCICP
PHTRGLECEECEEGYWGLDLNHGCQACNCSREGSTSPQCHMLSGHCQCKLEFGGQSCNQC
SLGYRDFPKCIPCDCDLRGTLVDTCDLDRGLCSCVEETGTCSCKENVFGLQCNKCRTGTF
ALHADNPLGCSPCFCFGLSHLCSELEGYVRTPVTLDSNQPLLRVVSQSNLRGTTEGVYYQ
APDVLLDATTVRQHVHAEPFYWRLPAQFQGDQLLAYGGKLKYSMAFYSSDGIGTSNYEPQ
ILIRGGRTRKQVIYMDVPAPENGVRRDQEVDMKENFWKYFNSVSEKPVTRSDFMSVLSNI
EYILIKASYGQGLQQSRISNISMEVGTKATELHPKREVASLLENCLCPPGTAGFSCQDCA
PGYHRGKLPEGSGRGPRPLLAPCVPCNCNNHSETCDPETGKCLNCRDNTAGDHCDVCAPG
YYGKVTGSTGDCSPCTCPHRYPSSFSPTCILEGDGDFRCDACTQGYEGQYCERCASGYHG
DPRTPGGSCQKCDCSPQGSVHSDCDRMSGQCTCRPGATGIRCQECQPRHMLVESNCVSCD
DECAGVLLNDLDNVGDAILSMNLTGIFPVPHRVLSNLENTTKYLQESLLKENTQKNWAGI
QLEGVAEQTEDLQKQLTRVLTNSQQVNRATERILDKSQDLAAFIERLHHSIREILEKATT
LNQTWDEDFHLPDSALHNMQQNISSLLEIIQKRNFTHLHQNATLELKAAEDLLSQVQKHY
QKPQEELEVFKKAAKGLLSKHNSDLRAVEELLRDAETKTQESNRLLLIVKANLREFRDKK
LRVQEEANLTSKLIAKGRGLIDAASTHGDTAQNALAQLEHHRDELLLWTAKIRHHVDDLV
MQMSKRRAIDLVHRAEDHAAELQRLAGVLDRGLENVRHVTLNATSAAHVHSTLQSLTEES
EKLASDAYRTINKISLFSESLLSNGTAALQRSSRFLNKSNNLSRKHQGITLELSKLRHRA
NGFQENADEIIRQTNESLLILRAIPEGMRDKGTKTKELALSANESAVRTLKDVVGLSQKL
LNTSTGLSRMNTTLQEMNGLLRDSTVTTLLAGRKVKDMETQANLLFDRLKPLKTLQENLS
RNLSEIRLLINQARKQAASIKVAVAADRDCIRAYQPQISSSNYNTLTLNVKTPEPDNLLF
YLGSSTSSDFLAVEMRRGKVAFLWDVGSGSTRLEFPDFPIDDNQWYSIHATRFGNVGSLS
VKEMSSTQKSPMKTSKSPGMANVLDINNSTLMFVGGLGGQIKKSPAVKVTHFKGCMGEAF
LNGKSIGLWNYVEREGKCDGCFSSPQNEDSSFHFDGSGYSVVEKTLRATVTQIIMLFSTF
SPNGLLLYLASNGTKDFLSIELVQGRVKVAVDLGSGPLVLMTDRRYNNGTWYKIAFQRNR
KQGLLAVIDAYDTSDKETKQGETPGPSSDLNRLEKDLIYVGGVPWSRVVRKGVTSKRYMG
CIRNLEISRSTFDLLRNSYGVRKGCRLEPIQSVSFLRGGYVELPPTSLSPESELLATFVT
QNSSGIILAALGRDAEKQGRRQAHMPFFSILLTEGHIEVHVSSGDGTSLRKALLHAPTGT
YGDGKEHSISLVRNWRIITVQLDEANPVELKLGPLAESKTINIFNLYIGGIPKDVEIPML
KMRRSFQGCIKNLIFNMELLDFTHAVSYEQADLDTCLLSERSKLALHGEDSELPPEPPTL
PQPEQCAVDIAPGYVPGAYQFGLSQSSHLTLPFNQSAVRRRLLVQLNIRTFASSGLIYYM
AHQNQVDYATLQLQRGRLHFMFDLGKGRTKVSHPALLNDGKWHMVKTEYFKRKGSMTVDG
QESPMVTMVGDGTTLDVEGMLYLGGLPSQYRARNIGNITHSIPACISEVTVNSRQLDKDS
PVSAFAVGRCYAVAQEGTFFEGSGYAALVKEGYKVRSDLNITLEFRTSSENGVLLGISSA
KVDAIGLEIVNGKLLFHVNNGAGRITATYEPRAARTLCDGKWHTLQANKSKHRVILIVDG
NAVSAESLHTQSTSADTNNPIYVGGYPADVKQNCLSSRASFRGCLRKLTLTKGPQVQSYD
FNTAFDLQGVFPHSCPGTEP
NT seq 9243 nt   +upstreamnt  +downstreamnt
atgcgaggcggctgcgcgcggggcgcgctcctggcctcgctgctctgggtcgccgtgcag
tgccagcagagaggtttgttccctgccattcttaacctggccagcaatgctcacatcagt
gccaacgcgacctgtggagagaaggggcctgagatgttttgcaaacttgtggagcatgta
cctggccgacctatacgaaatgcccagtgccgggtctgtgatggcagcagcgtgaacccc
aaagaacgccacccaatatcaaatgcaatagatggcaccaataactggtggcaaagtccc
agtatccaaaatgggagagagtatcactgggtcacgatcacgctggacctaagacaggtt
tttcaagttgcctacgtcatcattaaagccgccaatgcccccagacctggaaactggatt
ttggagcgctctctggatggcaccacattcagcccctggcagtattacgcagtcagtgac
acggagtgtttgacacgctacaatataactccaagacgggggccgcccacttacagagct
gacgatgaagtgatctgcacctcctattattctagactggtgccactggagcatggagag
attcatacatcactcatcaatggcagaccaagtgctgacgatccttcccccaagttgttg
gaatttacctctgcacgatacatccgccttcgattacagcgcatcagaacgctcaatgcg
gatctcatgacccttagccaccgggaacccaaagacctcgatcccattgttacgagacga
tattactattcgataaaggacatttctgttggagggatgtgcatttgctacggccatgct
agcagctgcccatgggatgaaactacaaagaaactacagtgcctatgtgaacacaatact
tgcggagagagctgtaacaggtgctgtcctgggtaccaccagcagccctggaggcctggg
accgtttcctctggtaacacatgtgaagaatgtaactgtcacaataaagccaaagactgt
tactacgatgaaagtgtcgccaatcagaagagaagcttgaatacggctgggcagttcaga
ggaggtggggtttgcattaattgccagcagaacaccatgggaatcaattgtgaaacctgt
gtggatggatattatagaccacataaaatttccccttatgaggatgaaccttgccatccc
tgtgactgtgaccttgtggggtccctcagtgccatctgtgttaaggatgatctgcattct
gacataaacaagggaaaatggccaggccagtgtccatgtaaggaaggttatgcaggagaa
aaatgtgatcgctgccagtttggctacaagggttatccaaactgtgtcccctgtgactgc
aatccaactggcagtgtgaacgaggatccatgcacagagccgtgtctttgtaaggaaaat
gtcgaaggggaaaattgtgaccgctgcaaaccaggcttctttaacttgaaggacagaaac
ccccagggctgctctgagtgcttctgctttggtgtctccggtgtctgcgacagcctttct
tggcacattggtcaggtgaatgatatgtctgggtggctggtcaccgacttggtcagttca
agtaagatccattctcagcaagaggcgctgagtgggcgccatcagatcagcatcaacaac
accatggtcatgcagagactgacttccaagtactactggtcggcccctgaggcctacctt
ggaaataagctgacctcatttggtgggttcctgaaatacacggtatcttatgatattcca
gtggagaccgtggacagtgacctcatgtctcatgcggacgtcatcatcaagggaaatgga
ctcactgtaagcacacaggctgagggcctgtcattgcaaccctatgaagagtacttcaat
gtggttagacttgtgcctgagaatttccgagacttcaataacaagaaggagatcgatcgt
gaccagttgatgaccgtccttgccaatgtgacacatctcttgatcagagccaactacaat
tctgcaagaatggcacattacaggttggattctgtctccttggacacagcgagccctaat
gctatagacctggcagtagccaccgatgtggagcactgtgaatgcccgccaggctacaca
gggacatcctgcgagtcctgcctctctggttattatcgagtcgatggaatactctttgga
ggaatttgtcagccctgcgaatgccatggccacgcatcagagtgtgatgttcacggagtt
tgcttggcatgtgcccacaacaccactggggaccactgtgagcggtgcctgcctggcttc
tatgggttgccttcccgtgggactcctggggactgccagccttgtgcctgtcctctctcc
acagcttccaacaatttcagtcccacctgccatctcaatggagacgaagtagtctgtgac
cagtgtgctccaggttactcaggagcttggtgcgagagatgcgcggatggttactatgga
aacccaacagtgcctggagaatcctgtgtaccgtgtgactgcaacgggaacgtcaacccc
tccgaggctggtcactgtgactctgtcaccggggaatgcctgaagtgtgtgggaaacaca
gacggcccccactgcgaaaggtgtgcagatgggttctatggggatgcggtgactgccaaa
aattgccaagcctgtgattgccatgagaaaggttccctttctgatgtgtgccatcttgag
actggactctgtgaatgcaaaccccacgtgactggacagcagtgtgaccaatgcctgcca
ggctattatgggctggacacagggcttggctgcttgccctgcaactgcagcaccacaggc
tccacctcggacgagtgcacagatgaaggccagtgtcactgcattccaggtgtggctggg
gaaaggtgcgacaggtgttcgcgtggcttctatgcctaccaagatggtggctgcacaccc
tgtgactgtgctcatacacagaataattgtgaccctgaatctggaaagtgcatctgccct
cctcatactcggggtctggaatgtgaagaatgtgaggaagggtactggggtctagacctg
aatcatgggtgccaggcctgcaattgtagtcgtgaggggtccaccagtccccagtgtcac
atgctttctggccattgccagtgcaaactggaatttggtgggcagagctgcaatcagtgc
tccttgggttacagagactttcccaaatgcattccctgtgactgcgacctgagggggacg
ctggtggacacctgtgacctggatcggggtctctgcagctgtgtggaggaaactggcacc
tgctcttgcaaggaaaatgtctttggcctccagtgcaacaagtgtcgtaccggcaccttt
gccctgcatgctgacaaccctctgggatgcagcccctgcttctgctttgggctgtcgcac
ctctgctcagagttggagggatatgtgaggaccccagtgacgctggactccaatcaacct
cttctgcgtgtggtttctcaaagcaacctgaggggcaccactgagggggtgtattaccag
gcccccgatgtcttgctggatgccacaacggtccgtcagcatgtccacgcggagccgttt
tactggcggctgccagctcagttccagggagaccagctcctggcatatggtggcaaacta
aagtacagcatggccttctactcttctgatggcattggcacctccaattatgagcctcaa
attctcatcagaggaggtcgaaccagaaagcaagtcatttacatggatgtaccagcacca
gagaatggagtgagacgggaccaagaagtagacatgaaagagaatttttggaaatatttt
aactctgtttctgaaaaacccgtcacacgttcggattttatgtccgtccttagcaatatt
gagtacatcctcatcaaggcatcatatggtcaaggattacagcaaagcagaatctcaaac
atttcaatggaggttggcacaaaggctactgagctgcaccctaagagagaagtggcttct
ctgttagagaattgtctctgtccccctggcacagctggattctcatgtcaggactgtgcc
cctggataccacagagggaagcttccagaaggcagtggcaggggaccacgccctctgctt
gctccttgtgtgccctgcaactgcaacaaccacagtgagacttgtgaccccgaaactggg
aagtgtctgaactgccgtgataacacagctggtgaccactgtgacgtgtgcgctcctggc
tactatggaaaggtgactggctccactggggactgttctccatgcacctgtcctcatcgc
tacccttccagctttagtcccacttgcatcttggaaggtgatggagatttccgttgtgat
gcctgtactcagggctacgaaggacaatattgtgaaaggtgcgcctcaggctaccacggg
gaccctcggacaccgggtggcagttgccagaagtgtgattgcagcccacagggctctgtt
cacagtgactgtgaccgcatgtccgggcagtgcacttgcaggccaggggccacgggaatc
cgatgccaggaatgccagccaaggcacatgctggtggagagcaattgtgtttcttgtgac
gacgagtgtgctggtgtgctgctgaatgacttggataacgttggcgacgccattctttcg
atgaacctcaccggcatcttccctgtcccacacagagttttgtcaaacctggaaaataca
actaaatatctccaggaatctttattaaaagaaaatacccaaaagaattgggcaggaatt
caactggaaggtgttgcagaacaaacagaggacctgcaaaagcagctcaccagagtgtta
acaaacagccagcaggtaaacagggcaacagagcgaattctcgacaagagtcaagacctg
gctgcattcattgagaggctgcatcacagcatcagagaaatccttgaaaaggcaacaact
ttaaatcagacctgggatgaagatttccacctacccgattctgctcttcacaatatgcaa
cagaacatttcctctttgctggaaattatacagaaaaggaatttcacacatttgcaccaa
aatgccacccttgaactcaaggctgctgaagatttattgtcacaagttcaaaaacattac
cagaagccacaggaagagttggaggtatttaaaaaagcagccaaaggcctcctttcaaag
cataacagtgatctgcgggcagtcgaagagctcctgagggatgcggaaaccaagacccag
gagagcaaccgcctgctgctcattgtcaaggccaacctgagagaattcagggataaaaag
ctgcgtgttcaagaagaagcgaatttgacctcaaagctaattgccaaaggaagaggattg
atagatgcagctagtacacatggagatactgcacaaaatgctctagcacagttggagcat
cacagggatgagctgcttctgtggactgctaaaatcaggcaccatgtagatgacctggtc
atgcagatgtccaaaaggagagcaattgaccttgtccacagagctgaggaccatgccgct
gagctccagagacttgcaggtgttttggaccgtggccttgaaaatgtcagacatgtgacc
ctgaatgcaaccagtgcggctcatgtccactccacccttcagagcctgacagaagaatcg
gaaaagctggccagtgatgcttacaggaccataaataagatcagcttgttctcagaatcc
ctcctttctaatgggacagcagctctgcagcgcagttccaggtttctaaacaaaagcaac
aacctcagcagaaagcaccaaggtattacattggagctgagtaaattgagacacagggca
aatggatttcaagagaatgcggatgaaattattagacagaccaatgaatcactcttgata
cttagagcaattcctgaaggtatgagagacaaaggaaccaaaaccaaagagctggccctg
tctgccaacgagagtgccgtgagaacactgaaggacgtcgtgggactgagccagaagcta
ttgaacacctcaaccggcctgtccaggatgaacaccacattgcaggagatgaatggactt
ctgcgggactccacggtgaccactctgttggctggaagaaaagttaaagacatggaaaca
caagccaaccttttatttgatcggttgaaacctttgaagacattacaggagaacctgagc
agaaatttatcagaaattagacttctgatcaaccaggcacggaaacaggcagcttctatt
aaagtcgctgtagctgctgacagagactgtatccgggcctaccagcctcagatttcttct
agtaactataacaccttgacactgaatgttaagacacctgaacctgacaacctgcttttc
taccttggcagcagcaccagttctgatttccttgcagtggagatgcgacgggggaaagtg
gccttcctctgggatgtgggctccgggtccacacggctggaatttccagactttcccatt
gatgacaaccagtggtacagcatccacgcaaccaggtttggaaatgttggttcattgagt
gtgaaggaaatgagttcaactcaaaagtcaccaatgaaaacaagtaaatcccccggaatg
gctaatgtgctggatataaacaattcaacactcatgtttgttggaggactcgggggacaa
atcaagaaatctccagcagtgaaggtgactcattttaaaggctgcatgggagaggccttc
ctgaatggcaaatccattggcctctggaactacgtcgaaagggagggcaagtgcgatggc
tgcttctcaagcccccagaatgaagactcttccttccattttgacgggagtggatactcg
gtggtagagaagacgctccgggccactgtgactcagatcataatgctctttagtaccttc
tcacctaatggtcttcttctctacctggcttcaaatggcactaaagacttcttgtccatc
gagctggtgcagggtagagttaaagttgcagttgacctgggttcaggacctcttgttctt
atgacagacagacggtataacaatggaacctggtacaaaattgccttccagcgaaacagg
aagcaaggactcctagctgttattgatgcatatgacactagtgataaggagaccaaacaa
ggggaaactccaggaccatcttcagatctcaatcgactagaaaaagatctgatttatgta
ggcggagtaccttggtcaagagttgtaaggaaaggtgtcaccagcaaaagatatatgggc
tgtatcaggaacctggaaatatccagatctaccttcgatttgctcagaaattcctatgga
gtgaggaaaggctgtagactggagcctattcaaagcgttagcttcctgaggggcggctac
gttgagttgccacccacatctttgtcaccggaatcggaattgctggccacatttgtcacc
cagaacagcagtggcatcatcctggctgcccttggcagggatgcagagaagcagggtcga
cggcaggcgcacatgcccttcttttccatcttgctgactgaaggccacattgaagtacat
gtgagctctggagacggaaccagcctgaggaaagctctcttacacgctcccacaggcact
tacggcgacggaaaagagcattccatctccttggttaggaattggagaattatcactgtt
cagttggatgaggccaatcctgtagaactgaagttaggcccactggcagagagcaagacg
ataaacatattcaacctgtacataggagggattcccaaggatgtggagataccaatgctc
aaaatgaggagatcattccagggctgtatcaaaaacctgatcttcaacatggaacttttg
gatttcacccatgcagttagctatgaacaagcggacttggacacctgcttgctttcagaa
aggtccaagctggcccttcacggagaggacagtgagcttccaccagaaccccctactcta
ccacagcctgaacagtgtgcggtggacatcgctcccggttatgtgcctggtgcttaccag
ttcggcctctcacaaagcagccacttgacattgccttttaatcagtcagctgtcagaagg
aggctcttagttcagctaaatatccggacgtttgcctccagtggtctgatttactacatg
gctcatcagaaccaagtggactacgccacgctccagctccagaggggccgcctccacttc
atgtttgaccttggcaaaggccgaaccaaggtctctcaccctgcgctgctcaacgatggc
aagtggcacatggtcaagacagagtactttaaaagaaaaggctccatgactgttgatggc
caagaatcccccatggtgaccatggtgggagatggaaccacactggacgtggagggtatg
ctgtacctgggaggccttccctcccagtacagggccaggaacattggaaatatcacccac
agcatccctgcctgcattagtgaggtgacagttaacagcagacagctggacaaggacagc
ccggtatctgcctttgcagtaggcaggtgctatgcagtggcccaagaaggaactttcttt
gaaggaagtggatatgcagcacttgtcaaagaaggctataaagtccggtcagatttaaac
atcacactcgagtttcgtacctcctcagaaaatggtgtcctcctggggatcagcagtgcc
aaagtggatgccatcggcctagagattgttaatggcaagctcttatttcatgtcaataac
ggtgctggaagaataacggccacttacgagcccagagctgccaggactctctgtgatgga
aaatggcacacccttcaagctaacaaaagcaaacaccgtgtcattctgatagtagatggg
aacgcagtcagtgccgaaagtctacacacccagtccacctcggcggacaccaacaatccc
atctatgttggtggctatcctgctgatgtcaagcaaaactgcctgagcagccgagcctcg
ttccgggggtgtttgaggaagcttaccctgactaagggcccacaggtgcagtcctacgac
ttcaacacagctttcgacctacagggagttttccctcattcctgtccagggactgagccc
tga

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