Sciurus carolinensis (gray squirrel): 124965837
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Entry
124965837 CDS
T08117
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124965837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124965837
03036 Chromosome and associated proteins [BR:
ncar03036
]
124965837
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
124965837
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124965837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
SAM_PNT
MSL3_chromo-like
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
124965837
NCBI-ProteinID:
XP_047382946
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All DBs
Position
15:25104775..25625283
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AA seq
612 aa
AA seq
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MKQPNRKRKLSMDSKEHLHQDGCLEQVEEEKQGSSATLLSHAPSVATQEPWSWEQYLKEQ
NAVAAPVELFSKDQSFPEHENGFQVGMRLEGIDPRHPSVFCVLSVAEVCGYRLRLHFDGY
LSCYDFWTNAGSPDIHPVGWCEKTKHELHIPKGYRKDKFVWMDYLKTCKLQNAPKKLFRN
RSSNGPVPKEFQVGMKLEAVDRKNPSLVCVATIADIVDDRLRVHFDNWDDSYDYWCDVNS
PYVQPVGWCQENGRTLIAPQGYPDPEKFSWPKYLETTQTNAVPAKVFRMRLPHGFLPNMK
LEVVDKRNPRLIRVATIIEVDDQRVKVHFDGWDHKYDYWQEADSPDIHPIGWCDVTGHPL
EVPRRANDVKILPGQAVCPTPGCRGIGHIRGPRYSGHHSAFGCPYSDMNLKKEATLHDRL
REQTQAHLEADSSHSKSKNLYSLNFNGKHETVNSQPRLVQQAKCLKIKGKEDIDLDNLFR
EYSAEQTQQALHQSVFLTSMTAHPSRDLPLGREQHCKLLPGVADIQASQVARWTVDQVVE
FVQSLLGCEEHAKCFKKEQIDGKAFLLLTQTDIVRVMKIKLGPALKIYNSILMFRTSQDL
TEDTVAGQDVTG
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacccaacaggaagagaaagcttagtatggactccaaagagcacttgcatcaa
gatggttgcttggaacaagttgaagaggagaagcaggggagcagtgcaacccttttgagt
cacgccccttcagtggctacacaagaaccctggtcttgggagcagtacttgaaagaacag
aatgctgtagcagcacctgttgagctgttttccaaggatcaatccttcccggagcacgaa
aatggttttcaggttggcatgagattagaaggcattgatccccgacatccatctgtattc
tgtgtgctttctgtagctgaggtgtgtggttaccggctaagacttcattttgatggatat
ttaagctgctatgatttttggaccaatgctggttcccccgacattcatccagtagggtgg
tgtgaaaagaccaagcatgaattgcacatccctaagggttatagaaaagataaatttgtt
tggatggattacttgaagacctgcaaattgcaaaatgctcctaagaaattattcagaaac
agaagttctaatgggccagtgcctaaggagtttcaggtgggaatgaagctggaggctgtg
gacaggaagaacccttccttggtgtgtgtggctaccatagcagatattgtggatgaccgc
ttacgagtgcattttgacaactgggatgacagctacgattactggtgtgatgttaatagt
ccttatgtccagccagttggttggtgtcaggagaatggaagaactttgatagcaccccaa
ggatatcctgatccagaaaaattttcctggccaaaatatctggaaactacccaaactaat
gcagtccctgccaaagtttttagaatgaggttgcctcatggttttctgccaaatatgaaa
cttgaagttgtggataaacgaaaccctaggttaattcgtgttgctacaattatagaagtt
gatgaccaaagagtaaaggttcactttgatggttgggaccataagtatgactattggcag
gaggcagacagccctgacattcaccccattggctggtgtgatgtaacaggacatccactg
gaagtgccacgtcgagcaaatgatgtgaaaatccttccaggtcaagctgtttgtcctaca
cctgggtgcagaggaataggccatatccgtggtccacgttattcaggacatcacagtgct
tttggctgcccttattcggacatgaacttgaaaaaggaggcaacgcttcatgatcgtctg
agagaacaaacacaggcacatttggaagcagactcttcacattcaaaatcgaaaaatctc
tatagtttgaacttcaatggaaaacatgaaacagtgaacagtcaacccagacttgtacag
caggcaaagtgtttgaaaatcaaaggaaaagaagatattgacttggataatctcttcaga
gaatactcagctgagcagacccagcaggccctgcaccaatcggtcttcctgacatccatg
actgcccacccttcgcgggaccttcccctcggcagggagcagcactgcaagctgctgcca
ggtgtagctgacatccaggccagccaggtggcccgatggacagtggaccaggtggttgag
tttgtacagtctcttctgggctgtgaagaacatgccaagtgcttcaagaaagagcagatc
gatggcaaagccttcctgcttctgacacagacagacattgtcagagtgatgaagatcaag
ctgggtccggcactgaagatctacaactccatcctgatgttcaggacctcccaggacctc
acagaagacactgtcgcaggccaagacgtcacagggtaa
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