Sciurus carolinensis (gray squirrel): 124966008
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Entry
124966008 CDS
T08117
Name
(RefSeq) cadherin-16-like isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124966008
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124966008
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
124966008
NCBI-ProteinID:
XP_047383021
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Position
16:18324119..18333162
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AA seq
827 aa
AA seq
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MVPAWLWLLCLYVIQAFPEAQAAELHVEVPENYGGNFPLYLTKLPLPREKAEGRVVLTGD
SDMAAEGPFAVDPDSGFLMVTRALDREEQAEYQLQVTLEAEDGLVLWGPQLVIVHVKDEN
DQVPQFSQAIYRAQLSQGTRPGIPFLFLEASDGDAPGTANSDLRFQILSQAPAQVSPDMF
QLEPRLGALALSPEGSTSLDHALAGPYELLVQVKDMGDQASGHQATATIEISVVESTWVP
LGTIHLAENLEVLYPHHISQARWSGGDVHYHLESQPPGPFEVDTEGKLHVTRELDREAQA
EYMLQVRAQNSHGEDYTAPLELHVVVTDENDNRPICLPRGPSVSIPELSSPGTEVTRLSA
EDADAPGSPNSHVVYRLLSPEPIEGAEGKTFELDPTSGSVTLGTAPLKAGENILLQVLAI
DLAGAEGGLSSTCEIAVRITDINDHAPEFTTSQIGPISLPEDVEPETLVATLMATDADLE
PAFRLMDFAIEAGNMEGIFGLDWEPDSGHVQLRLRKNLSYEAAPHHKVVVVVRNVEELVG
PGPGPGSTATVTVLVERMIPPPKLDQESYEARIPVSTPAGSLLLTIQPSDPMSRTLRFSL
VNDSEGWLCIKEFSGEVHTAQSLHGAQPGDSYTVIVEAQDADEPGLSTSATLVVRFLKAP
PAPTLTLTPVPARHLCTPRQDYGVLITSEDPDMVSGHGPYSFSLGPNPTVQRDWRLQPLN
GSHAYLTLALHWVEPREHVVPVVVSHNARMWQLLVRVIVCRCNVEGQCMRKVGRMKGMPT
KLSAVGILVGTLAAIGFFLILIFTHLALARKKDLDQPADSVPLKAVV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtccctgcctggctgtggttgctttgcctctacgtcatccaggctttccctgaggcc
caggctgcagaactgcatgtggaagtccctgaaaactatggtggaaatttccctttgtat
ctgaccaagctgccactgccccgtgagaaggctgaaggtcgggttgtgctgacaggggac
tcagacatggcagctgagggcccctttgctgtggatccagattctggcttcctgatggtg
accagggccctggacagagaggaacaggcagaatatcagctgcaggtcaccctggaggct
gaggatggacttgtcttgtggggtccacagcttgtgattgtgcatgtgaaggatgagaat
gaccaggtgccccaattctcccaggccatctacagagctcaactgagtcagggtaccagg
cctggtatccccttcctcttccttgaggcttcagatggggatgcaccaggaacagccaac
tcagatcttcgatttcagatcctgagccaggcaccagcccaggtttcaccagacatgttc
cagttggagcctcgactgggggctctggctctcagccctgagggaagcaccagcctagac
catgccctggcaggaccctacgagttgttggtacaggtcaaggatatgggtgaccaagcc
tcaggccaccaggccacagccactatagagatctctgtagtagagagcacctgggtaccc
ctagggactatccacctggcagagaatcttgaagttctgtacccacaccacatttcccag
gcacgctggagtgggggggatgtccattatcacctggagagccagccccctgggccattt
gaagtggacacagaggggaaacttcatgtgaccagggagctggaccgagaggcccaggct
gagtatatgctccaggtgcgggctcagaattcccatggtgaggactacacggcacccctg
gagttacatgtggtggtgacggatgagaatgacaacagacccatctgcctccctcgtggt
ccctcagtcagcatccctgaactcagctccccaggcactgaagtgacaaggttgtcggca
gaggacgcagatgcccctggctctcccaattcccatgttgtgtatcggctgctgagtcct
gaacctatagagggggcagaggggaaaacctttgagctggatcccacttcaggcagtgtg
actctggggactgccccactcaaagctggcgagaacattctgcttcaggtgctggccatt
gacctagcaggagcagagggtggactcagcagcacgtgtgagattgcagttaggatcaca
gacatcaatgaccatgctcctgagttcaccacctcccagattgggcctataagcctccct
gaggatgtggagcctgagactttggtagccactctcatggccactgatgctgaccttgag
cctgccttccgccttatggactttgccattgaagcagggaacatggaagggatatttggc
ctggattgggagccagactctggtcatgtccaactcagactccgcaagaacctcagctat
gaggcagctccccatcacaaggtggtggtggtggtacgaaacgtggaagaactggtgggc
ccaggtccaggccctggatccacagccacagtgactgtgctggtggagaggatgatacca
ccccccaagttggaccaggaaagctatgaggccaggatcccggtcagcaccccagctggg
tccctgctgcttaccatccagccctcagaccctatgagcagaaccctcaggttctccctg
gtcaatgactcagagggctggctatgcatcaaggagttctctggggaagtgcacacggcc
cagtccctgcatggcgcccagcctggggactcatacacagtgattgtggaggcccaggat
gcagatgagccgggactgagtacctctgccaccctggtggtccgcttcctaaaggcccct
cctgcccctaccctgactctgacccctgtacctgcccgacacctctgcacaccacgccag
gactatggtgtgctcatcaccagtgaagaccctgacatggtcagcgggcacggtccctac
agcttttctctaggtcccaaccccacagtgcagcgggattggcgcctccagcctctcaat
ggttctcatgcctacctcaccctggccctgcattgggtagagccacgagaacatgtagtc
cccgtggttgtcagccacaatgcccggatgtggcagctcctggttcgagtgattgtgtgc
cgctgcaatgtggagggacagtgcatgcgcaaggtgggccgcatgaagggcatgcccaca
aagctgtcggcagtgggcatccttgtgggcaccctggcagcaataggcttcttcctcatc
ctcatcttcacccacctggccctggcaaggaagaaggacctggatcagccagcagacagt
gtgcccctgaaagcggtagtctga
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