KEGG   Sciurus carolinensis (gray squirrel): 124966012
Entry
124966012         CDS       T08117                                 
Name
(RefSeq) tubulin beta-3 chain
  KO
K07375  tubulin beta
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04145  Phagosome
ncar04540  Gap junction
ncar04814  Motor proteins
ncar05010  Alzheimer disease
ncar05012  Parkinson disease
ncar05014  Amyotrophic lateral sclerosis
ncar05016  Huntington disease
ncar05020  Prion disease
ncar05022  Pathways of neurodegeneration - multiple diseases
ncar05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124966012
  09144 Cellular community - eukaryotes
   04540 Gap junction
    124966012
  09142 Cell motility
   04814 Motor proteins
    124966012
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124966012
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124966012
   05012 Parkinson disease
    124966012
   05014 Amyotrophic lateral sclerosis
    124966012
   05016 Huntington disease
    124966012
   05020 Prion disease
    124966012
   05022 Pathways of neurodegeneration - multiple diseases
    124966012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncar03036]
    124966012
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ncar04812]
    124966012
   04147 Exosome [BR:ncar04147]
    124966012
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     124966012
Cytoskeleton proteins [BR:ncar04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    124966012
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124966012
  Exosomal proteins of colorectal cancer cells
   124966012
  Exosomal proteins of bladder cancer cells
   124966012
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 124966012
NCBI-ProteinID: XP_047383032
LinkDB
Position
16:complement(179810..188966)
AA seq 450 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV
PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEMYEDDEEESEAQGPK
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgcacatccaggccggccagtgcggcaaccagatcggggccaagttc
tgggaagtcatcagtgatgagcatggcatcgaccctagtggcaactatgtgggagactca
gacctgcagctggagcgcatcagcgtctactacaacgaagcctcctctcacaagtatgtg
cctcgggccatcctggtggatctggagcctggaaccatggacagtgtccggtctggggcc
ttcgggcaccttttcaggcctgataacttcatctttggtcagagtggggccggaaacaac
tgggccaagggccactacacggaaggcgccgagttggtggactccgtcctggacgtggtg
cgcaaggagtgtgagaactgcgactgcctgcagggcttccagctgacgcactcgctgggc
ggcggcaccggctcgggcatgggcacgctgctcatcagcaaggtgcgcgaggagtacccc
gaccgcatcatgaacaccttcagcgtggtgccctcgcccaaggtgtcggacacggtcgtg
gagccctacaacgccacgctgtccatccaccagctggtggagaacacggacgagacctac
tgcatcgacaacgaggcgctctacgacatctgcttccgcaccctcaagctggccacgccc
acctacggggacctcaaccacctagtgtcggccaccatgagtggggtcaccacctcgctg
cgcttcccgggtcagctcaacgccgacctgcgcaagctggccgtgaacatggttcccttc
ccgcgcctgcacttcttcatgccgggcttcgcgccgctgaccgcccggggcagccagcag
taccgcgcgctgaccgtgcccgagctcacccagcagatgttcgacgccaagaacatgatg
gctgcctgcgacccacgccacggccgctacctcaccgtggccaccgtcttccgtgggcgc
atgtccatgaaggaggtggacgagcagatgctggccatccagagtaagaacagcagctac
ttcgtggagtggatccccaacaacgtcaaggtggccgtgtgcgacatccctccccgtggg
ctcaagatgtcctccaccttcattggcaacagcacggccatccaggagctgttcaagcgc
atctcggagcagttcaccgccatgttccgccgcaaggccttcctgcactggtacacgggc
gagggcatggacgagatggagttcaccgaggcggagagcaacatgaacgacctggtgtcc
gagtaccagcagtaccaggacgccacggccgaggaggagggcgagatgtacgaggacgac
gaggaggagtcggaggcccagggccccaagtga

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