Sciurus carolinensis (gray squirrel): 124966027
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Entry
124966027 CDS
T08117
Name
(RefSeq) genetic suppressor element 1 isoform X1
KO
K27276
genetic suppressor element 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124966027
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
124966027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3736
Amnionless
Motif
Other DBs
NCBI-GeneID:
124966027
NCBI-ProteinID:
XP_047383074
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All DBs
Position
16:complement(2986406..3299250)
Genome browser
AA seq
2072 aa
AA seq
DB search
MSGRPAPLSRKQRLMAAVGERAAGGGAALSCFICGGGIGRGKELKLQVKEPAAAGAGAPA
QPFFPFLQQQEPAPGARELSPADGCVLVCAVCRCFLGEQWAAFERARTPVDKRMYWLKRP
HQCDAGAGGRRGGAGAPREWNVAYALGSAAGDEDDDGGGPGPRAAAEDTRDSELSELSDT
DPLSEPDPAARDASSPLQDAPPAPRAMLGPGPRGGRCQEWRPAPGPPPGQGVEPLAQGDV
EEGVSSKLHADVEPKTGVRRRRKGVGRHWVPEPRASVLRGIQDLWQSPPGQAAPTDGMKE
THSVKATKPQESRAPGDSLRGYCTSEDSDINITSEEEEHKEQPVPDPCGPREKGSGGGVP
RTLPESQAVPPEGLCCYVCGSVLSPASQHQVHVQKQEKLAQAPFFPFLWLHSPPPGAQPI
SEAGSTLVCSCCFSSLMQQWQSFELASVPVLQRLYVVPLNSHAPGMASKGRRLPREEAPP
TRTLQEACYLCGEDCTQDARAVPSRALNGSARSTMHFPFLSLLPCPPNARAPNKRCEVRS
CPKCFSVLEDVWALYRACQNQELITSVQGFLGRYHQAFSASDPALCEPPASAPGTAASVC
YICGAELGPGKEFQLNVNPASRLGEKEPFFPFLTVYPPAPRARPADSTGLVAACVLCYHD
LLGQWLQHEARGAHHAVSAWARQYQVETFVCFFCQQEKKRRLGLRSVRVARLPLFLYTLR
ASHSLLVDDGRQLIIGACVECGTLVCAGQGLTRQGPGGWGSPVAAVTKVTSASLEASAAV
HPPAREPESRPGPCQESLPPGPRTTQELRPPQCQQSGRDGDRLDLTGTGMSHEPKSPSLG
MLSTATRTTATVNPLTPSPLNGALVPSGSPATSSTLSAQAAPSSSFAAALRKLAKQAEEP
RGSSLSTESSPVSSPATNHSSPASTPKRVPMGPIIVPPGGHSVPSTPPVVTIAPTKTVNG
VWRSESRPDAGSRGSTSGRERLIVEPPLPQEKAGGPALTSHLLSTPYPFGLSPSSVVQDS
RFPPLNLQRPVHHVVPPSTVTEDYLRSFRPYHTAEDLRMSSLPPLSLDPATAYYHPSYLA
PHPFPHPAFRWQPRAWPTGLSSQVDGPQAPPGPAAVLTQDSLLCRMEDSYCLSALRSPFY
PIPAPSSLPPLHPSAVHLHLSGVRYPPELAHSSLAALHSERMSSLSAERLQMDEELRRER
EREREREADREREKEREREREKEREREKELEREREKERERELERQREQRAREKELLAAKA
LEPAFLPVTELHALRGHAPEERAKPSEQLTPTRAEKLKDVGLQAPKPVQHPLHPVPAPHH
SVPSLISNHGIFSLPGSSAATALLIQRTNEEEKWLARQRRLRQEKEDRQSQVSEFRQQVL
EQHLDMGRPPVPPEAEHRPDSSRPGPNRHEQGSRDPPQHFGGPPPLISPKPQHHTVPTAL
WNPVSMMDTTLETRRAESHSLHSHPAAFEPSRQAAVPLVKVERVYCPEKAEEPRKRESAP
LDKYQPPPREAGSLEPQAFPHGPGPFLTELEKSTQTILGQQRASLPQAASFGEMSGPLKP
GSPYRHPTPRGPDPAYIYDEFLQQRRRLVSKLDLEERRRREAQEKGYYYDLDESYDESDE
EEVRAHLRCVAEQPPLKLDTSSEKLEFLQLFGLTTQQQKEELVAQKRRKRRRMLRERSPS
PPVIQSKRQTPSPRLALSTRYSPDEMNNSPNFEEKRKFLTIFNLTHISAEKRKDKERLVE
MLRAVKQRALSTAVADSTNSPRDSPAVSLSEPATQPASLETDKPVGVAGSLSEIPKATET
GRLEQLRPQELSRVQEPAPTSGEKARLSEAPGGKKNLSMLHYIRGAAPKDIPVPLSHSIN
GKSKPWEPFMAEEFAHQFHESVLQSTQKALQKHKGSVAVLSAEQNHKIDTSVHYNIPELQ
SSSRVPLPQHNGQQELPAGRKGPPTQEMDPDSEEEEEEEEEGEEDSEEEEEAAPRRKWQG
IEAIFEAYQEHVEEQNLERQVLQTQCRRLEAQHYSLSLAAEQLSHSMAELRSQKQKIVSE
RERLQAELDHLRKCLALPAMHWPRGYFKGYPR
NT seq
6219 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcggccggcgccgctctcccgcaagcagcggctcatggcagccgtgggcgag
cgggcggcgggcggcggcgcggcgctctcctgcttcatctgcggcggcggcatcgggcgc
ggcaaggagctgaagctgcaggtgaaggagccggcggcggcgggcgcgggggccccggcg
cagcccttcttcccgttcctgcagcagcaggagccggcgcccggcgcgcgcgagctgtcg
ccggccgacggctgcgtgctggtgtgcgccgtgtgccgctgcttcctgggcgagcagtgg
gccgccttcgagcgcgcgcgcacgccggtggacaagcgcatgtactggctcaagcggccc
caccagtgcgacgcgggcgccggagggcgccgcgggggcgccggggccccccgcgagtgg
aacgtcgcctatgcgctgggcagcgccgccggggacgaggacgacgacggcggcggcccg
gggccccgcgcggccgccgaggacactcgagactccgagctgtcggagctgtcggacacc
gaccccctgtcggagcccgacccggccgcgcgcgacgccagcagccctctgcaggacgcg
ccgcctgctccgcgggccatgctgggacccgggccccgcgggggccgctgccaggagtgg
aggccggcgccgggaccccctccgggacagggcgtagagcccctggcgcagggcgatgtg
gaggagggggtctcctcgaagctccacgctgacgtggagcccaagactggagtcaggcgc
cggcgaaagggcgttggaaggcactgggttcccgagccccgggccagcgtcctgaggggc
attcaagacctttggcaaagccctccgggccaggcagcccctacagatggcatgaaagaa
actcactctgtcaaggccaccaagccccaggagagcagggcccctggggactctctccgg
ggttactgcacatctgaggacagtgacatcaacatcaccagtgaagaagaggaacacaag
gagcagccggtcccggacccctgtggccccagagagaagggcagcggtggtggtgtccct
cggactctcccggagagccaggctgtgccaccagagggcctgtgctgctacgtctgcggg
tcagttctgtcccccgcctcccagcaccaggtccacgtgcagaagcaggagaagctggcc
caggcgcccttcttccccttcctctggctgcacagcccgcccccaggggcgcagcccatc
agcgaggcgggcagcaccctggtctgctcctgttgcttctcctccctcatgcagcagtgg
cagagcttcgagctggccagcgtgcccgtcctgcagcgactctatgtggtgcccctgaac
agccacgcccccggcatggcctccaagggcaggaggctccccagggaggaggcccccccc
accaggaccctgcaggaggcctgttacctctgcggggaggactgcacccaggatgcccgg
gcagtgccctcccgggccctcaacggcagcgccaggagcaccatgcatttccccttcctc
agcctcctgccctgcccacccaatgcccgggcccccaacaagcgctgcgaggtccgcagc
tgccccaaatgcttcagcgtcctggaggacgtctgggccctgtaccgggcctgccagaac
caggagctcatcacctctgtgcagggcttcctgggcaggtaccaccaggccttctccgcc
tccgaccctgccctctgcgagccgcccgcctctgccccaggtaccgcggcatccgtctgc
tacatctgcggggcggagctgggccccgggaaggaattccagctcaacgtgaaccccgcc
agccgcctgggcgagaaggagcccttcttccccttcctcactgtctacccgcctgcccca
cgggcaaggccagcggactccaccggcctggtggccgcctgtgtgctctgctaccacgac
ctgctgggccagtggctgcagcacgaggcccgtggggcgcaccacgccgtcagcgcctgg
gcccggcagtaccaggtggagaccttcgtgtgcttcttctgccagcaggagaagaaacgg
cgtctggggctgcggtccgtgcgggtggcccggctgcccctgttcctctacaccctgcga
gccagccacagcctgctggtggacgacgggcggcagctgatcatcggggcctgcgtggaa
tgtgggaccctggtgtgcgcgggccaagggctcacccgccaggggcctgggggctggggc
tccccagtggcggcagtgacgaaggtcacctctgcatctctggaggcatctgcagctgtc
caccctcctgcccgtgagccggagtcacggccaggcccctgccaggagagccttcccccc
ggccccaggaccacccaagagctgaggccaccacagtgccagcagagtggccgggacggg
gacagactagacctcacgggcacaggcatgagccatgagcccaagtccccttcactaggg
atgctttccaccgcgaccaggaccaccgccaccgtcaaccccctcaccccctcaccactc
aatggcgccctggtgcccagcggcagcccggccaccagcagcacgctgtcggcccaggct
gcgccgtcctccagctttgccgccgcgctgcgcaagctcgccaaacaggcggaggagccc
agagggtcatcactgagcaccgagtcgtcccccgtgtcctctccggccaccaaccacagc
tcccccgccagcacacccaagcgtgtacccatgggtcccattatcgtccctccagggggc
cacagcgtccccagcacacctcccgtggtgaccatcgccccaaccaagactgtcaacgga
gtgtggaggagcgagagccgccctgacgccggctcgaggggcagcaccagtggtcgggag
cgcctcatcgtggagccgccgctgccccaggagaaggccgggggccccgccctcacgtcg
cacctgctcagcaccccctaccccttcggcctctcacccagctccgtggtgcaggactca
cgcttcccaccactcaacctgcagcggcccgtgcaccacgtggtgccacctagcacagtg
acggaggactacctgagaagcttccggccctaccacaccgcggaggatctgcgcatgtcc
tccctgcccccgctcagcctggacccggccactgcctactaccaccccagctacctggcc
ccgcaccccttcccccacccggccttcaggtggcagccccgagcctggcccacaggcctg
tcgtcacaagtggacggccctcaggcaccacctggcccagcggcagtgttgacccaggac
tcccttctctgcaggatggaggactcctattgcctgtcggccctgaggtccccgttctac
cccatccccgcccccagctccctgccccccctgcacccatcggctgtgcacctgcacctc
tcgggggtccgctacccccccgagctcgcccactcgtcccttgcggcactgcactcggag
cgaatgtccagcctcagcgcagagaggctacagatggacgaggagctgcgtcgggagcga
gagcgggagcgggagcgggaggccgaccgggagcgggagaaggagcgcgagcgggagcgg
gagaaggagcgtgagcgggagaaggagctggagcgggagcgggagaaggagcgcgagcgg
gagctggagcgccagcgggagcagcgtgcccgggagaaggagctgctggccgccaaggcg
ctggagccggccttcctgcctgtgaccgagctgcacgcactgcgtggccacgcccccgag
gagcgcgccaagccctcggagcagctgacccccactcgcgcagagaagctgaaggacgtg
ggcctgcaggcgcccaagcccgtgcagcaccccttgcacccagtccccgccccgcaccac
tctgtacccagcctcatctccaaccacggcatcttctccctgccgggcagcagtgccgcc
accgccctgctgatccagcgcaccaacgaggaggagaagtggctggcgcggcagcggcgg
ctgcggcaggagaaggaagaccggcagtcgcaggtgtccgagttccggcagcaggtgctg
gagcagcacctggacatgggccggcccccggtgcccccagaggcagagcaccggcccgac
agcagcaggccaggaccaaaccgtcatgagcagggcagccgcgaccctccacagcacttt
ggggggccaccacctctcatctcaccgaagcctcagcaccacactgtgcccacggccctc
tggaacccagtgtccatgatggacaccaccttggagacacggcgggctgagagccactct
ctgcacagccacccagctgcatttgagcccagccgccaggctgctgtgccgctggtgaag
gtggagcgtgtctactgcccggagaaggccgaggagccccggaagcgggagtctgcccca
ctggacaagtaccagcccccgccgagggaggcaggaagcctagagccccaggccttcccc
cacgggcccgggccctttctcaccgaacttgagaagtctacgcagaccattctgggtcag
cagcgagcctccctcccccaggcagcctctttcggggagatgagtgggcccctcaagcct
ggttcaccttaccggcacccaacacccaggggccctgatcctgcctacatctacgatgag
ttcctacagcagcgccggaggctggtcagcaagctggacctggaggagcgccggcggcga
gaggcacaggagaaagggtactactacgaccttgatgagtcctacgacgagagtgatgag
gaggaggtcagggcccacctccgctgcgtggccgagcagccgcctctcaaactggacacg
tcctcagagaagctagagtttttgcaactttttggcttgaccacccaacagcagaaggag
gaactggtggcccagaagcggaggaagcggcgacggatgctgagagagaggagcccctcg
ccccccgtgattcagagtaagcggcagacgccttcgccgagactggcactgtctacccgc
tacagccccgacgagatgaacaacagtcccaacttcgaggagaagaggaagttcctgacc
atcttcaacctgacccacatcagtgctgagaagaggaaagacaaagagagacttgttgaa
atgctccgtgccgtgaagcagagggcactatcaacagcagtggcagactcgacaaactct
ccgagggacagtcctgccgtctccctgagcgaaccagccacacagccagcttctctggag
acggataagcctgttggggtcgctggctccttgtctgagatcccaaaggccacagagact
gggagactggaacagctccggccccaagagctatcgagagtccaggagccagctcctacc
agcggtgagaaggccaggctgagcgaggcccctgggggcaagaagaacctgagcatgctt
cattacatccggggtgctgcacccaaggacatccctgtgccgttgtcccacagcatcaac
gggaagagcaagccgtgggagcccttcatggcagaagagtttgcgcatcagttccatgag
tccgtgctgcagtccacccagaaggccctgcagaagcataaagggagtgtggctgtgctg
tctgcagagcagaaccacaagattgacacatccgtccactacaacattcctgagctgcag
tcctccagtcgggtccccctgccccagcataacgggcaacaggagctcccagctgggagg
aagggccctcccacacaggagatggacccagactcggaggaggaggaggaggaagaggag
gagggtgaggaggacagtgaagaggaggaggaggcggcccccaggcgcaagtggcaaggg
atcgaggcaatttttgaagcttaccaggaacatgtggaagagcaaaacctggagcggcag
gtgttacagacacagtgccggcggctggaggcacagcactacagcctcagtctggcagca
gagcagctttcccacagcatggcggagttgaggagccagaagcagaagattgtctcagag
agggagcggctccaggcagaactggaccacttacggaagtgccttgccttgcccgccatg
cactggcccaggggctactttaagggatatccgaggtga
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