Sciurus carolinensis (gray squirrel): 124966285
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Entry
124966285 CDS
T08117
Name
(RefSeq) rho GTPase-activating protein SYDE2-like isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124966285
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124966285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
124966285
NCBI-ProteinID:
XP_047383267
LinkDB
All DBs
Position
1:137576044..137619200
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AA seq
1385 aa
AA seq
DB search
MADPLRRTLSRLRERRGPRSAGGHGFRVAAAAAVAASSATRGDTWRARDCPSREHAGAAG
PSLEQPPPSPEARGPGGCPEQSRALGPRPRGGQAVSLPGRGLAPASLQGALSSEGSGEEE
DDDADYNADYYENLPGGSQPAAAPAPEGAEAERRPPPPPAAGSSSGAEGGSLETGRLQTQ
LREAYYLLIQAMHDLPPDSGTRRGGRGLADRGCLAGAGAPGQLLLPRGTAESGVCLGDWE
RGGGDCSRQQVSPPWSPPRESEGGRPRTPRMRLPCSRSLESLRVVSKPPPFRRWPSDSWI
RCGTLGDLDESPPRGGGMDGWSGGSAGAAASAGPLPPGTKDPGSSSESPFRDPAGPSMIR
SSQEDRQEGPPTLKPPTVTVKKLQKWMYKGRLLSLGMKGRVRGTPPKVSGVQAASPDLGS
LKVRENPILSVPPDRRITLTDLFENVYGSSVKRRESEDLKDNIEFRGQKPLNSITVSKKR
NWLYQSPLRSLNLEEENRKCQDRSHLSLSPVSLPKHQLSHPFLKEEYCTYMVCNATNSLS
RNCSSDFNEENDADDEGEIWYNPIPEDDDLEISGALSFRESNPALLKLPAVSLSILSGSD
PMKIEQPTEDLLCSSEHKGDTETSQSNEINPIDYIHSTECMQQYKQRLGPKTQEGLMVED
SPILKSPSAGKGPGILAATSRTELGFMEPSSPSPSPVKKGSSINWSLPDKIKSPRTVRKL
SMKMKRLPEFSRKLGVKGTLNYVNSSDNTPSLSKYNCREIHHTVILPSGNTTTAAKRNVI
SRYHLDTTVSSQHSYQKKTSKSLKYSCKGGYLSDGDSPELITKSSKHGSESKFGKGKEII
PNSCSKNEIDIDAFRHYNFSDQPKCSQYISGLMSVHFYGAEDLKPPRIDSKDVFCAIQVD
SVNKARTALLTCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNKVCCHGTVVLPTL
FRVTKTHQLAVKLEPRGLIYVKVTLMEQWENSLHGLDKNRESVIFGVDIQKVVEKENVGL
MVPLLIQKCIMEIEKRGCQVVGLYRLCGSAAVKKELREAFERDSKAVGLCENEYPDINVI
TGVLKDYLRELPSPLITKQLYEAVLDAMVKSPLKMSSSGCENDPGDSKFTVDLLNCLPGV
EKATLKMLLDHLKLVASHHEVNKMTCQNLAVCFGPVLLSQRQETSTHNNRVFTDSEELAS
ALNFKKHIEVLHYLLQLWPVQRLAVKESTDNLFPEQFSSLNYLRRKKERPHMLNLNSIDS
SGVLRPRQTRLDSPLSNRYAGDWSSCGENYFLNIKENLNDVDYDDVPSEDRENGEDYSKM
DGPEIMIEQPIPMSKECTFQTYLTMQTIESTVDRKVNLKDLQESIDTLIGNLERELNKNK
LNMSV
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccctctgaggaggacgctgtccaggctccgggagaggaggggtccccgtagc
gccggggggcacgggttccgagtagccgctgcagctgcggtggcggcctcctccgcaacc
cggggagacacctggcgtgcccgagactgcccctcacgcgagcacgccggcgcggcgggg
ccaagcctggagcagcccccgccgtcacctgaggcgcgcggccccggagggtgcccggag
cagtcgcgggcgcttgggcctcggccgcgcggcgggcaggcggtctctctcccgggtcgc
gggctcgctcccgcctctctgcaaggagcactgagctccgaaggcagcggagaggaggag
gatgacgacgccgactacaacgccgactactacgagaacctgcccggcggctcgcaaccc
gcggccgcgccagcgcctgagggggcggaggcggagcggcggcccccgcctcccccggcg
gcgggctcctcctcgggggcggagggcggcagcctggagacgggcaggctgcagacccag
ttgcgagaggcctattatctgctgatccaggccatgcacgacctgccccctgactcaggc
acgcggcggggcggcaggggcttggcggatcgcggctgcctcgcgggagccggggctcct
ggccagctactcttgccccgcggcactgcggaaagcggagtctgcctcggagactgggag
cggggaggtggcgactgctctcggcaacaggtgtccccgccctggtcgcctccaagggag
tcggagggaggccggcctcggactcctcgaatgagactgccctgcagcagaagccttgag
agcctccgagtggtctccaagcctcctcccttccggcggtggccgagcgacagctggatc
aggtgcggcacgctcggggacctggacgagtccccgccacgtggaggcgggatggacggc
tggagcgggggcagcgccggggcggcagcgtccgctggacccttgcctccaggcactaag
gaccccggcagctcctcggaaagtcctttcagggatcctgcggggccttctatgatccgc
agtagccaagaagaccgccaggaaggccccccaaccctcaaaccgcccacagtcacagtc
aagaagctgcagaagtggatgtacaaaggtcgcttgctgtccctgggaatgaagggtcgc
gtccgtgggacaccccctaaagtctcgggagtgcaggctgcatctcctgacctgggctct
ttgaaagtgcgtgagaaccccatcctctcggtgcctccagataggagaattacactgaca
gatttatttgaaaatgtctatgggtcttcagtgaagagaagagaatctgaggatctgaag
gataatattgaattcagaggtcaaaagccacttaacagtattactgtttcaaagaaacgt
aattggttatatcagagtcctctgagatctcttaatctggaagaagaaaataggaaatgc
caagataggagtcatttatctctctcacctgtgtctcttcctaaacatcagctgtcacat
cctttcctcaaagaagaatactgtacatacatggtgtgtaatgctacaaactcattatca
agaaactgctcttcagactttaacgaggaaaatgatgcagatgatgaaggagaaatatgg
tacaatcccattcctgaggatgatgaccttgagatatcaggtgccttgagtttccgtgag
tcaaaccctgctcttctgaagttacctgctgtcagtttgagcatattgtctgggagtgac
ccaatgaaaatagagcagcctactgaagatctgttgtgctcttctgaacacaaaggtgat
actgagacatctcagtcaaatgaaattaatcctatagattacatccattccacagaatgt
atgcagcagtacaagcaaaggctaggacctaagacacaagaaggtttaatggtggaggat
agtcccatattgaaatctccttctgcaggtaaaggtcctggaatcttagctgctactagt
aggactgaattgggatttatggaaccatcctctccaagccctagccctgtgaaaaaagga
agttcaattaattggtccttgccagataaaataaaatctccacgaactgtgaggaaactt
tccatgaaaatgaaaagattgccagaatttagccgaaagctaggtgttaagggaactctg
aattatgtaaacagttcagataatactccttccttgtctaaatataactgtcgagaaatt
catcatacagttattttaccttctggaaacactaccacagctgctaagaggaatgtcata
agccggtaccatcttgataccactgtatcttctcagcacagctaccagaagaaaacttcc
aagagtttgaagtattcctgcaaaggtggctacctcagtgatggagactcacctgaactt
ataactaaatctagcaaacatggatctgaaagcaaatttggaaaaggaaaagaaataatt
ccaaacagttgtagtaaaaatgaaatagacatagatgcttttaggcattataatttttct
gatcaacccaaatgttcacagtatatatctgggctcatgagtgtgcatttctatggtgct
gaggatttaaaaccaccacggatagattcaaaagatgtcttttgtgcaattcaggtagat
tcagtgaacaaagcaagaacagctttgctcacgtgtcggacaacatttttagacatggat
cacactttcaacatagaaattgaaaatgcacaacatttaaaactagtagtatttagttgg
gagcccactccaagaaaaaataaagtgtgttgtcatggaactgttgttctccccacctta
ttcagagtgacaaagacacatcagttggctgtcaaacttgaacctagaggtcttatatat
gtgaaagtgactcttatggaacagtgggaaaattctcttcacggactagataaaaatcga
gaatcagtaatatttggtgttgacattcaaaaagttgtagaaaaagaaaatgtaggattg
atggtgccactcctgatacagaaatgtattatggaaattgaaaagagaggctgtcaggta
gtgggcctgtatcgattatgtggttcagcagcagtcaagaaagaacttcgagaggctttt
gagcgggatagcaaagctgttggtctgtgtgaaaacgagtacccagatataaatgtaata
acaggtgttcttaaggattatttaagagaacttccttctcctttgataacaaagcagctt
tatgaggctgtattagatgcaatggtaaaaagtcctttgaaaatgtcatcaagtggttgt
gaaaatgacccaggtgattctaagttcactgttgacctgttgaattgtctgccaggtgtt
gagaaggcaaccctaaagatgttgttggatcatttgaaattggtggcttctcatcatgaa
gtgaataagatgacctgccagaatttggctgtgtgctttggaccagtattattaagtcag
aggcaagagacttccacccataacaacagagtctttactgactcagaagaacttgcaagt
gctttgaattttaaaaaacatattgaagttcttcattacttactccaactctggccagtg
caacgtttagctgtcaaagaatcaacagacaatttgttcccagagcagttctcttctctg
aattatttgaggcggaagaaagaacgacctcacatgttaaatttgaatagtattgattca
tcaggagtacttagaccaaggcagaccagattagacagtccacttagcaatcgttatgca
ggagactggagcagttgtggagaaaactactttttaaatataaaagaaaatttaaatgat
gtggattatgatgatgtaccttcagaagatagagaaaatggagaagattatagcaaaatg
gatggaccagaaataatgattgaacaaccaattcctatgtccaaagagtgcacattccag
acatacttgacaatgcagacaattgagtctacagtggatcgaaaagttaatctcaaagat
ctacaagaaagcattgatactctgattggcaatctggaacgtgagctcaacaaaaacaag
cttaatatgagtgtttaa
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