KEGG   Sciurus carolinensis (gray squirrel): 124966286
Entry
124966286         CDS       T08117                                 
Name
(RefSeq) U6 snRNA phosphodiesterase 1-like isoform X1
  KO
K23093  U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncar03041]
    124966286
Spliceosome [BR:ncar03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    124966286
SSDB
Motif
Pfam: HVSL
Other DBs
NCBI-GeneID: 124966286
NCBI-ProteinID: XP_047383266
LinkDB
Position
16:complement(26224862..26239648)
AA seq 273 aa
MSAGPLVGYSSSGSEDEAEDEAEDEAATKGRTRPVTGGCRGGQSPVPSQRFPVPDSVLNM
FPSTEERPEDDSAKHGGRVRTFPHERGNWATHVYLPYEAREEFLELLDMLLPHAQTYVPQ
LVRMEAFHLSLSQSVVLRHHWILPFVQALKDRMASFHRFFFTANRVKIYTNQEKTRTFVG
LEVTAGHAECLDLVSEVDRVLEEFNLTTFYPDPSFHISLAWCVGDARPQLEGQCLQELQE
ILDEFEDSEMLLRVFTEQVRCKSGNKFFSMPLK
NT seq 822 nt   +upstreamnt  +downstreamnt
atgagcgcaggacctctggtgggctatagcagcagtggctcagaggatgaggccgaggac
gaggctgaggacgaggcagcgaccaaggggcggaccaggccggtgactgggggctgtcgt
ggtggccagagccctgttcctagtcagaggttcccagtacctgacagtgtactgaacatg
ttccccagcacagaggagaggcctgaggatgacagtgcaaaacatgggggacgagtgcgc
acctttccccacgagcgaggcaactgggccacccatgtctacctaccatatgaagccagg
gaggagttcctggagctgcttgatatgttgctgccccacgcgcagacctatgtgccccag
ctggtgaggatggaggccttccacctcagcttgtctcagagcgtggttctgcgccaccac
tggatcctccccttcgtgcaggctctgaaagaccgcatggcctccttccatagattcttc
tttactgccaaccgagtaaagatttataccaatcaagagaagaccaggacctttgttggg
ctcgaggtcactgcagggcatgccgagtgcctggacctggtttcagaggtagacagagtc
ctggaggaattcaacctcaccactttctatccggacccttcattccacatcagtctggcc
tggtgtgtgggtgatgctcgtccccagctagaagggcagtgcctgcaggaactacaggaa
atcttggatgagtttgaagattctgagatgctgctccgtgtgttcaccgagcaagtccgc
tgcaagtcggggaacaagttcttctccatgcctttgaagtga

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