Sciurus carolinensis (gray squirrel): 124966305
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Entry
124966305 CDS
T08117
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124966305
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124966305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
124966305
NCBI-ProteinID:
XP_047383310
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All DBs
Position
16:complement(49433376..49438038)
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AA seq
529 aa
AA seq
DB search
MAPTIQTQAQREDGHRPNSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQ
YKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPNVLLDPADEKLLEEEIQAPTSSKR
SQQHAKVVPWMRKTEYISTEFNRYGISNEKPEVKIGVSVKQQFTEEEIYKDRDSQITAIE
KTFEDAQKSISQHYSKPRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEM
MSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVK
NKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRAKAGVQSGTNALLVVKHRDMNEKE
LEAQEARKAQLENHEPEEEEEEEMEAEEKEAGGSDEENEKGSSSEKEGSEDERSGSESER
EEGDREEASDKSGSGEDESSEDEARAARDKEEIFGSDADSEDDADSDDEDRGRARGGSDN
DSDSGSDGGGQRSRSRSASPFPSGSEHSAQEDGSEAAASDSSEADSDSD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccatccagacccaggcccagcgggaggatggccacaggcccaattcccac
cgaactctgcctgagagatctggagtggtctgccgagtcaagtactgcaatagtctccct
gacatccccttcgaccccaagttcatcacatacccctttgaccagaacaggtttgtccag
tataaagcgacttcgttggagaaacagcacaaacatgacctcctgactgagccagatctg
ggagtcaccattgacctcatcaaccctgacacctaccgcattgatcctaatgttctcctg
gatccagctgatgagaagcttttagaagaggagattcaggctcccactagctccaagaga
tcccagcagcatgcaaaggtagtgccatggatgcggaagacagagtacatctccactgag
ttcaaccgttatggcatctctaacgagaaacctgaggtcaagattggagtttctgtgaag
cagcagttcaccgaggaagaaatatataaagacagggacagccagatcacagccatcgag
aagacttttgaggatgcccagaaatcaatctcccagcattacagcaagccccgagtgaca
ccagtggaggtcatgcctgtcttcccagactttaagatgtggatcaacccatgcgctcag
gtaatctttgattcagatccagcccccaaggacacaagtggtgcagcggcactggagatg
atgtctcaggccatgatcaggggcatgatggatgaagaggggaaccaatttgtggcctat
ttcctgcctgtggaagagacactgaagaaacgaaaacgtgaccaggaggaggagatggac
tatgcaccagatgatgtgtatgactacaagattgctcgggagtacaactggaatgtgaag
aacaaggctagcaagggctacgaggaaaactatttcttcatcttccgagagggtgatggg
gtttactacaatgagttggagaccagggtccgccttagtaagcgacgggccaaggctgga
gttcagtcaggcaccaatgccctgcttgtggtcaaacaccgggacatgaatgagaaggaa
ttagaagcccaggaggcacggaaggcccagctggaaaaccacgagcccgaggaggaagag
gaggaggagatggaggcagaagagaaagaagctgggggctcagatgaggagaatgagaag
ggtagcagcagtgagaaggagggcagcgaggacgagcgttcaggcagtgagagtgaacgg
gaggagggcgacagggaggaggcaagtgacaagagtggaagtggtgaggacgagagcagc
gaggacgaagcccgggctgcccgggacaaagaggagatctttggtagtgatgctgattcg
gaggatgatgctgactctgatgatgaggacagaggacgggcccgtggtggcagtgacaat
gactcagacagtggcagtgatgggggtggccagcggagtcgcagccggagcgccagcccc
ttccccagtggcagtgaacattcagcccaggaggacggcagtgaggctgcagcttctgat
tccagtgaggctgacagcgacagtgactga
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