Sciurus carolinensis (gray squirrel): 124966409
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Entry
124966409 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04510
Focal adhesion
ncar04611
Platelet activation
ncar04670
Leukocyte transendothelial migration
ncar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124966409
09142 Cell motility
04810 Regulation of actin cytoskeleton
124966409
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
124966409
04670 Leukocyte transendothelial migration
124966409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124966409
Membrane trafficking [BR:
ncar04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124966409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
FF
GTP_EFTU
Cdh1_DBD_1
NOG1
Motif
Other DBs
NCBI-GeneID:
124966409
NCBI-ProteinID:
XP_047383615
LinkDB
All DBs
Position
16:56010781..56121188
Genome browser
AA seq
1521 aa
AA seq
DB search
MMMARKQDVRIPTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEFHLDHTSVLST
SDFGGRVVNNDHFLYWGEVSRSLEDCVECKMHIVEQTEFIDDQTFQPHRSTALQPYIKRA
AATKLASAEKLMYFCTDQLGLEQDFEQKQMPDGKLLVDGFLLGIDVSRGMNRNFDDQLKF
VSNLYNQLAKTKKPIVVVLTKCDEGVERYIRDAHTFALSKKNLQVVETSARSNVNVDLAF
STLVQLIDKSRGKTKIIPYFEALKQQSQQIATAKDKYEWLVSRIVKNHNENWLSVSRKMQ
ASPEYQDYVYLEGTQKAKKLFLQHIHRLKHEHIERRRKLYLAALPLAFEALIPNLDEIDH
LSCIKAKKLLETKPEFLKWFVVLEETPWDATSHIDNMENERIPFDLMDTVPAEQLYETHL
EKLRNERRRAEMRRAFKENLETSPFITPGKPWEEARSFIMNEDFYQWLEESVYMDIYGKH
QKQIIDKAKEEFQELLLEYSELFYELELDAKPSKEKMGVIQDVLGEEQRFKALQKLQAER
DALILKHIHFVYHPTKETCPSCPACVDARIEHLISSRFIRPSDRNQKNSLSDPNIDRINL
VILGKDGLARELANEIRALCTNDDKYVIDGKMYELSLRPIEGNVRLPVNSFQTPTFQPHG
CLCLYNSKESLSYVVESIEKSRESTLGRRDNHLVHLPLTLILVNKRGDTSGETLHSLIQQ
GQQIASKLQCVFLDPASAGIGYGRNINEKQISQVLKGLLDSKRNLNLVSSTASIKDLADV
DLRIVMCLMCGDPFSADDILFPVLQSQTCKSSHCGSNNSVLLELPIGLHKKRIELSILSY
HSSFSIRKSRLVHGYIVFYSAKRKASLAMLCAFLCEVQDIIPIQLVALTDGAIDVLDNDL
SREQLTEGEEIAQEIDGRFTSIPCSQPQHKLEIFHPFFKDVVEKKNIIEATHMYDNAAEA
CSTTEEVFNSPRAGSPLCNSNLQDSEEDIEPPSYTLFREDTSLPSLSKDHSKLSMELEGN
DGLSFIMSNFESKLNNKVPPPVKPKPPVHFEITKGDLSYLDQGHRDGQRKSVSSSPWLPQ
DGFDPSDYAEPMDAVVKPRNEEENIYSVPHDSTQGKIITIRNINKAQSNGSGNGSDSEMD
TSSLERGRKVSIVSKPVLYRTRCARLGRFARYRTSFSVGSDDELGPIRKKEEDQASQGYK
GDNAVIPYETDEDPRRRNILRSLRRNTKKPKPKPRPSITKATWESNYFGXPLTTVVTPEK
PIPXFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQGKPNLDLAEKDFTVNTVA
GAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISH
LNKVSHNNKVNLMTSENLSICFWPTLMRPDFSTMDALTATRTYQTIIELFIQQCPFFFYN
RPISEPPGACPAPPQPWLPPFPSSPPRLSPVSHHPPSHLHPPRSPPCSHCXPPSSKPNTR
CEPPGLGQRENWSLKQCGTQP
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcaagaaagcaagatgtccgcattcccacctacaacatcagtgtggtggga
ttgtctgggactgagaaggagaaaggccagtgtggcattgggaagtcttgtctctgcaac
cgctttgtgcgcccaagtgctgatgagtttcacttggaccatacctctgtcctcagcacc
agtgattttggtgggcgagtggtcaataatgaccactttctctactggggagaagttagc
cgctccctggaggattgtgtggaatgtaagatgcacattgtggagcagactgaatttatt
gatgatcaaacttttcagcctcatcgaagcacggccctgcagccctacatcaagagagct
gctgcaaccaagcttgcatcagctgaaaaactcatgtacttttgcactgaccagctgggg
ctggaacaggactttgagcagaaacaaatgccagatggaaagctgctggtggatggtttt
cttcttggtattgatgttagcaggggcatgaataggaactttgatgaccagctcaagttt
gtctccaatctctacaatcagcttgcaaaaacaaaaaaacccatagtggtggtcctgacc
aagtgcgacgagggcgttgagcggtacattagagatgcacatacttttgccttaagcaaa
aagaaccttcaggttgtagagacctcagcacgatccaatgtaaacgtggacttggctttc
agcaccttagtgcaactcattgataaaagtcggggaaagacgaaaattattccttatttt
gaagctctcaaacagcagagccagcagatagctacagcaaaagacaagtatgagtggcta
gtgagtcgcattgtgaaaaatcacaatgagaattggttgagtgtcagccgaaagatgcag
gcctccccagagtaccaggactatgtctacctggaagggactcagaaggccaagaagctg
tttctacagcacatccaccgcctaaagcacgagcacattgagcgcaggagaaagctgtac
ctggctgccctgccgttagcttttgaagcgcttattcctaatctagatgaaatagaccac
ctaagctgcataaaagccaaaaaactcttagagaccaaaccagaattcttgaagtggttt
gttgtgcttgaagagacaccatgggatgccaccagtcacattgacaacatggaaaatgaa
cggattccctttgacttaatggatactgttcctgcagaacagctctatgagacccactta
gagaagctgaggaatgagaggaggagagcggagatgagaagggctttcaaggaaaacctg
gagacctcgcctttcataactcccggtaaaccttgggaagaggcccgtagttttattatg
aatgaagatttctatcagtggctagaagaatctgtatacatggatatttatggcaaacat
caaaagcagattatagacaaagcaaaggaagaatttcaggagttgcttttggaatattca
gaattgttttatgagctggagctggatgcgaagcccagcaaggagaagatgggtgtcatt
caggatgtcctgggggaggaacagcgatttaaagcactacaaaagctccaggcagagcgg
gatgccctcattctgaagcacattcatttcgtgtaccacccaacgaaagagacctgcccc
agctgcccagcttgtgtggacgctaggattgagcacttgattagttctcggtttatccga
ccatctgaccggaatcagaaaaattcactttctgaccccaacattgataggatcaacttg
gttatcttgggcaaagatggcctcgcccgagagttggccaatgagattcgagctctttgt
accaatgatgacaagtatgtgatagatggtaaaatgtatgaactttccctgaggccaata
gaggggaatgtcaggcttcctgtgaactctttccagacaccaacctttcagccccacggc
tgtctctgcctttacaattcaaaggaatcactgtcctacgtagtagagagtatagagaaa
agcagagagtccacactgggccggcgggataatcatttagtccacctccccctgacacta
attttggttaataagagaggagacactagcggagagaccctgcatagcttaatacaacaa
ggtcaacaaattgctagcaaacttcagtgtgtctttctcgacccggcttctgctggcatc
ggttatggacgcaacattaatgagaaacaaatcagtcaagttttgaagggactactagac
tcaaagcgaaacttaaacctggtcagttctactgctagcatcaaagatttagccgatgtc
gatctgcgaattgttatgtgtctgatgtgtggtgatccttttagtgcagacgatatactc
tttcctgtccttcagtcccaaacctgtaagtcttcccattgtgggagcaacaactctgtt
ttacttgaacttccaattgggctacacaaaaagcgcattgaactgtctattctctcatac
cattcctcgtttagtatcagaaagagccggttggttcatgggtacattgttttttattca
gccaaacgtaaggcctccttggctatgttatgtgcctttctttgtgaagtgcaggatatt
atccctatccagcttgtagcactcactgatggcgccatagatgtcctggacaatgactta
agtcgggaacaactgacagagggggaggagattgctcaagaaattgatggaaggttcaca
agtatcccctgtagccaaccccagcacaaacttgagatctttcacccattttttaaagat
gtagtggagaagaagaacataatcgaggccactcatatgtacgataatgctgccgaggcc
tgtagcaccactgaggaggtctttaactccccccgggctggctcaccactctgcaactca
aatctgcaggattcagaagaggatatcgagcccccatcttacaccctgttccgagaagac
acatcactgccctctctgtccaaagaccattccaagctttctatggaactggagggaaat
gacgggctatctttcatcatgagcaattttgagagtaaactgaacaacaaagtacctcca
ccagtcaaaccaaagccccccgtccattttgaaattacaaagggagatctgtcttattta
gaccaaggccacagggatggacagaggaagtctgtgtcctctagtccttggctgcctcag
gatggcttcgatccttctgactacgctgaacccatggatgctgtggtcaagccaaggaat
gaagaagaaaatatatactctgtgccccacgacagcacccaaggcaaaatcatcaccatt
cggaatattaacaaagcccagtccaatggcagtggcaatggttctgacagtgagatggac
accagttctctagagcgaggccgcaaggtatccattgtgagcaagccagtgctatacagg
acgagatgcgcccgactggggcggtttgctcgttatcgaaccagtttcagcgtggggagt
gacgatgagctggggcccatcagaaagaaggaggaggatcaggcttcccagggttataaa
ggggacaatgctgtcattccatacgaaacagatgaagacccgaggaggaggaatatcctt
cgtagtctaaggaggaacactaagaaaccaaagcccaaacctcgaccgtccatcacaaag
gcaacctgggagagtaactactttgggntgcccttaacaactgttgtaactccagagaag
ccgatccccnattttattgaaagatgtatcgagtacattgaagccacaggtctgagcact
gaaggcatctaccgggtcagtgggaacaagtcagagatggagagtctgcagagacagttt
gatcaaggtaaaccaaacctggacttggcagagaaagacttcacggtgaacactgtggca
ggcgccatgaaaagcttcttctcagaactgccagaccccctggtcccctacaacatgcag
atagacctggtggaggcgcacaaaatcaacgaccgggagcagaaattgcacgctcttaag
gaagtattaaagaaattcccaaaggaaaaccacgaagtcttcaaatatgtcatctctcac
ctaaacaaagtcagccataacaacaaggtgaacctcatgaccagcgagaacctctccatc
tgcttctggcccaccttgatgaggccggacttcagcaccatggacgcgctcacggccacg
cgcacctaccagacaatcatcgagctcttcatccagcagtgccccttcttcttctacaac
cggcccatcagcgagcccccaggtgcctgcccagctccccctcagccgtggctgccaccg
ttcccttcctcacctccacgcctgtcaccagtcagccatcacccccccagtcacctccac
ccaccccgcagtcccccatgcagccactgcntccctcccagctccaagccgaacacacgc
tgtgagccgccaggcctggggcagcgggagaactggtctctgaagcagtgtggcactcag
ccttga
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integrated database retrieval system
