Sciurus carolinensis (gray squirrel): 124966474
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Entry
124966474 CDS
T08117
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124966474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124966474
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124966474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124966474
NCBI-ProteinID:
XP_047383691
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All DBs
Position
16:complement(11913290..11914637)
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AA seq
272 aa
AA seq
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MPGDHRRIRGPEESQPPQLYAADEDEPPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQAEGGERGSGPAGAGGEAPAALRGRLLCDFRRAPFSGRRRRAPPGGGEER
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALAAALTAAALALADAGIEMYDLV
VGCGLSLAPGPAPTWLLDPTRLEEERAAAGLTVALMPVLNQVAGLLGSGEGGQTESWAEA
LRLGLEGCQRLYPVLQQCLVRAARRRSAASPS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagaccaccgccgtatccgcggaccggaggagtcccagccaccgcagctgtac
gcggccgacgaggatgagccgcctgccgcccgcgacccgacgcggctgcggcctgtgtac
gcgcgcgccgggcttctgagccaggccaagggctcggcctacctggaggcaggaggcacc
aaggtgttgtgcgccgtgtctggcccgcgccaggccgagggcggcgagcgcggcagtggc
cctgccggagcgggcggcgaggccccggccgcgctgcgcggtcgcctgctctgcgacttt
cgccgcgcacccttctccggccgccgacgccgcgcgcccccgggcggcggcgaggagcgc
gagttggccttggcgctgcaggaggcgctggagccggcagtgcgcctggggcgctatccg
cgcgcgcagctcgaggtgtcggcgctgctgctggaggacggcggctccgcgctggccgcc
gcgctcacggccgcggcacttgccctggcggacgcgggaattgagatgtacgacctggtg
gtgggctgcggcctgagcctcgcgccgggacccgcgcccacctggctgctagaccccacg
cggctcgaggaggagcgtgccgccgccgggctcaccgtggcgctcatgccggtgctcaat
caggtggccgggctgctaggcagcggggagggcggccagacagagagctgggccgaggcc
ttgcgcctgggtctcgagggctgccagcgcctgtacccggtgctgcagcagtgcctggtg
cgggcagcccgccggaggagcgccgcctccccgtcctga
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