Sciurus carolinensis (gray squirrel): 124966522
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Entry
124966522 CDS
T08117
Name
(RefSeq) F-box/LRR-repeat protein 2-like isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124966522
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124966522
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
LRR_At5g56370
LRR_Zer-1
LRR_EndoS
F-box
F-box-like
LRR_8
LRR_14
Motif
Other DBs
NCBI-GeneID:
124966522
NCBI-ProteinID:
XP_047383804
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All DBs
Position
16:18053739..18068992
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AA seq
631 aa
AA seq
DB search
MAESLPLEMLTYILSFLPLSDQKEASLVSRAWYCAAQNALRETNVRYNIPVSSASLLAIK
SLGLRGISCISLTNLDSSPTSQLVLQSVAYHLGPHLQSLCLGGGNPTEASFVALILGCPA
LRTLDLSGCNSLFTSGTLLAQPEMAQRVRQALSGLRELNLACLRNLADLSFNQLSSCAPS
LERLSLAYCHLTFELGPAQGSISPQDYSPSQLSFRNLLRFVKERAGKLRALDLSGTGLPP
EALQSLGQVAGLQLQELSLHSCRDLSTEAVVTLCRQQPGLTSLDLSGCSELTDGALLAVS
RGLQHLQHLSLGKLQRLTDAGCTALGGLRELQSLDMAECCLVSGRELAQALGSVHGAPPP
LTSLRLAYCSSLKDASVLSLIPALGPSLRVLDLSSCVALSNQTLQAICTYHTHLSVLRLA
WCKELCDWGLLGLEESRVFKGKLRKNLKSRGFSPQLHPELEHHASGSEDASPMPQGPSLL
TLQALQELDLTACSKLTDASLAKVLQFPQLRQLSLSLLPALTDVGLVAVARGCPSLEHLV
LSHCSHLTDEGWAQAAGSWPRLQHLNLSNCSQLTEQTLDTIRQACKQIRVLDVAMCPGIN
VVAVRRFQAQLPQVTCVQSRFVGGADLTLTL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcgctgcccctggagatgctcacgtatattctgagcttccttcctctgtca
gatcagaaagaggcctctctcgtgagtcgggcttggtactgtgcagcccagaatgccctt
cgggagacaaacgtgcggtacaacatcccagtgtcttctgcctcccttttggccatcaag
agcttgggcctcaggggcatctcctgcatcagcctgacgaacctggacagctcaccaact
tcacagctggtgctgcagtctgtcgcctatcatctaggcccacacctacagagcttgtgc
ctgggtgggggcaatcccacagaggcttcctttgtggccctgatcctgggatgcccagcc
ctgcgcacccttgacctcagtggctgcaacagcctcttcacatcaggcacactgctagct
cagccagagatggcacagcgtgtccggcaggcgttgagtggcctgcgtgagctcaacctg
gcttgcctgcggaacctggctgatctcagcttcaaccagctcagcagctgtgcccccagc
ctggagcgcctctccctggcctattgccatctcacctttgagctaggcccagcccagggt
tccatcagcccccaggattactctccctcccaactctccttccgtaacctgctgcgattt
gtgaaggagcgagctggcaaacttcgtgccctagatctgagtggcaccggcttaccacct
gaggccctacagtccctgggccaagtagctgggctacagctgcaggagctgagcctgcac
agctgccgggacctctccacagaggctgtggtcaccctgtgccgccagcaaccaggcctt
acttccctggacctcagtggctgctcagaactgactgatggggcactcttggccgtgagc
cgtggcctgcagcacctgcagcacctgagcctgggaaagttgcaacggctgacagatgca
gggtgtacagcccttgggggcctgcgagagttgcagagcctggatatggctgagtgctgc
ctggtaagcgggcgggaactggcccaggccttgggctcagtgcatggagctccaccccca
ctgacctccctcaggctggcttactgctcttcgctgaaggatgcctcagtgctctctctg
atcccagcgctgggcccaagccttagagtgctagacttgtcctcctgtgtggccctctcc
aatcagaccctgcaggccatctgcacctaccacacccacctctctgttctgcgcctggct
tggtgcaaggagctctgcgactgggggcttctggggctagaagaatcaagagtttttaag
ggcaaactcaggaagaacctgaaaagcagaggtttctccccacagctacacccagagcta
gagcatcatgcctcaggttctgaggatgcttctcccatgccacagggtccatccctgctc
acactgcaggccctgcaggagttggacctgacagcctgcagcaagctgactgacgccagt
ttggccaaggtcctccagttcccccagctgaggcaattgtcactgagcctgttgccagca
ctcacagacgtgggcttggtggcagtggccagaggctgccccagcttggagcacttggtg
ctgagtcactgcagccacctcaccgacgagggatgggcccaggcagcagggtcctggcca
aggctacagcacctcaacctgtccaactgtagccaactcacagagcaaactctggatacc
attaggcaggcgtgcaagcagatccgggtgttggacgtggccatgtgcccgggtattaac
gtggtagctgtcagacgtttccaggcccagctgcctcaggtgacttgtgtccagtcccgc
ttcgtgggaggggcggacctgaccctaacactctga
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