Sciurus carolinensis (gray squirrel): 124966548
Help
Entry
124966548 CDS
T08117
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00600
Sphingolipid metabolism
ncar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124966548
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
124966548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
124966548
NCBI-ProteinID:
XP_047383860
LinkDB
All DBs
Position
16:16685782..16770888
Genome browser
AA seq
655 aa
AA seq
DB search
MVLYTTPFPNSCLSALHAVSWALIFPCYWLVDRLAASFIPTTYEKRQRADDPCCLQLLCT
ALFTPVYLALLVAALPFAFLGFLFWSPLQSARRPYIYSRLEDKSPTGGAALLGEWKGTGA
GKSFCFATANLCLLPDSLARLNNLFNTQARAKEIGQRIRNGAARPQIKIYIDSPTNTSIS
AASFSSLVSPQGGEGGARAVPGSIKRTASVEYKGDGGRHPGDEAANGPASGDPADGNLED
ACIVRIGGEEGGRPPEGDDPATGSQARNGAGGGSRGQTPNHNQRDGDSGSLGSPSASRES
LVKARAGPDGGGGGEPGANSKLLYKASVVKKAARRRRHPDEAFDHEVSAFFPANLDFLCL
QEVFDKRAAAKLKEQLHGYFEYILYDVGVYGCRGCCNFKCLNSGLFFASRYPVMDVAYHC
YPNGCSFDALASKGALFLKVQVGSTPQDQRIVGYIACTHLHAPPEDSAIRCEQLDLLQDW
LADFRKSTSSSSAANPEELVVFDVLCGDLNFDNCSSDDKLEQQHSLFTRYKDPCRLGPGE
EKPWAIGTLLDTNGLYDEDVCTPDNLQKVLESEEGRREYLAFPTSKSPGSGQKGRKDLLK
GNGRRIDYMLHAEEGLCPDWKAEVEEFSFITQLSGLTDHLPVAMRLMVSAGEEEA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggttttgtacacgaccccctttcctaatagctgtctgtccgccctgcacgccgtgtcc
tgggccctcatcttcccatgttactggctggtggaccggttggcggcctccttcataccc
accacctacgagaagcgccagcgggcagacgacccgtgctgcctgcagctgctctgcacc
gccctcttcacgcccgtctacctggccctcctcgtggccgcgctgcccttcgccttcctc
gggttcctcttctggtcccccctgcagtctgcccgccggccctacatctactcacggctg
gaggacaagagcccaactggaggggcagccctgcttggtgaatggaagggcacaggggct
ggcaaaagcttctgcttcgccaccgccaacctctgcctcctccctgactcgcttgccagg
ctcaacaacctgttcaacacccaagcgcgggccaaggagatcgggcagaggatccgcaat
ggggcagcccggccccagatcaaaatctacatcgattcgcccaccaacacctccatcagc
gcagccagcttcagcagcctggtgtcaccacagggcggcgagggcggggcccgggccgtc
cctgggagcatcaagaggacagcctctgtggaatacaagggggatggcggtcgtcaccca
ggtgatgaggctgccaatggcccggcctctggggacccagccgacggcaaccttgaggac
gcctgcattgtgcgcatcggtggcgaggaggggggccggccacctgaaggcgatgaccct
gccactgggagccaagccaggaatggggctggcggaggctcacggggccagacgcccaac
cacaatcagcgggacggggattcggggagcctgggcagcccctcagcctccagggagtcc
ctggtgaaggcgcgagctgggccagatggcggtggcggcggggagccgggtgccaacagc
aagctcctgtacaaggcctcggtggtgaagaaagccgcccgcaggaggcggcacccggac
gaggccttcgaccacgaggtctcagccttcttccccgccaacctggacttcctgtgcctg
caggaggtgtttgacaagcgggcagccgccaagttgaaagagcagctgcatggctacttc
gagtacatcctgtatgacgtcggggtctacggctgccgcggctgctgcaacttcaagtgt
ctcaacagcggcctcttctttgccagccgctacccagtcatggacgtggcctatcactgt
taccccaatgggtgcagcttcgatgccctggcctctaagggagctctgtttctcaaggtg
caggtgggaagcacacctcaggaccaaagaatcgtcgggtacatcgcctgcacacacctg
cacgccccaccagaggacagtgccatccggtgtgagcagctggacctgcttcaggactgg
ctggctgatttccgaaaatctacctcctcgtccagcgcagccaaccccgaggagctggtg
gtgtttgacgtcctctgcggagatttgaactttgacaactgctcctctgatgacaagctg
gagcagcagcactccctgtttacacgatacaaggacccctgccgcctggggcctggggag
gagaagccgtgggccatcggtaccttgctggacacaaatggcctctatgatgaggatgtg
tgcacccctgacaatcttcaaaaggtcctggaaagcgaggaaggccgcagggagtacctg
gctttccctactagcaagagtccagggtctggtcagaaggggcggaaggacctgctaaag
ggcaatggacggcgcattgactacatgctgcatgctgaggaggggctgtgccccgactgg
aaggccgaggtggaagaattcagttttatcacccaactgtctggcctgacggaccacctc
ccggtggccatgcggctgatggtgtctgcaggggaggaggaggcgtag
DBGET
integrated database retrieval system
